RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 ZNF233A6NK53 670 aa10.85□□□□□ -0.67
CACNA1A-216ENST00000635742 KIAA0391O15091 583 aaKnown RBP10.85□□□□□ -0.67
CACNA1A-216ENST00000635742 CCP110O43303 1012 aa10.85□□□□□ -0.67
CACNA1A-216ENST00000635742 ZSCAN12O43309 604 aa10.85□□□□□ -0.67
CACNA1A-216ENST00000635742 FAM189A1O60320 539 aa10.85□□□□□ -0.67
CACNA1A-216ENST00000635742 N4BP1O75113 896 aaKnown RBP10.85□□□□□ -0.67
CACNA1A-216ENST00000635742 DUSP11O75319 330 aaKnown RBP10.85□□□□□ -0.67
CACNA1A-216ENST00000635742 CSDE1O75534 798 aaKnown RBP10.85□□□□□ -0.67
CACNA1A-216ENST00000635742 NDUFA10O95299 355 aa10.85□□□□□ -0.67
CACNA1A-216ENST00000635742 CCDC175P0C221 793 aa10.85□□□□□ -0.67
CACNA1A-216ENST00000635742 IQCF3P0C7M6 154 aa10.85□□□□□ -0.67
CACNA1A-216ENST00000635742 TNNT1P13805 278 aa10.85□□□□□ -0.67
CACNA1A-216ENST00000635742 ELNP15502 786 aa10.85□□□□□ -0.67
CACNA1A-216ENST00000635742 SEZ6Q53EL9 994 aa10.85□□□□□ -0.67
CACNA1A-216ENST00000635742 SFMBT2Q5VUG0 894 aa10.85□□□□□ -0.67
CACNA1A-216ENST00000635742 HGSNATQ68CP4 663 aa10.85□□□□□ -0.67
CACNA1A-216ENST00000635742 SLFN12LQ6IEE8 588 aa10.85□□□□□ -0.67
CACNA1A-216ENST00000635742 ZBTB33Q86T24 672 aa10.85□□□□□ -0.67
CACNA1A-216ENST00000635742 KIAA0319LQ8IZA0 1049 aa10.85□□□□□ -0.67
CACNA1A-216ENST00000635742 NFKBIZQ9BYH8 718 aa10.85□□□□□ -0.67
CACNA1A-216ENST00000635742 NHEJ1Q9H9Q4 299 aaPredicted RBP10.85□□□□□ -0.67
CACNA1A-216ENST00000635742 TRIP12Q14669 1992 aaPredicted RBP10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 RRN3P2A6NIE6 340 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 ACKR2O00590 384 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 P4HA2O15460 535 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 TOM1L1O75674 476 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 PNMA6AP0CW24 399 aaPredicted RBP10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 PROZP22891 400 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 TMOD1P28289 359 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 PHKA2P46019 1235 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 GPC3P51654 580 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 JAM2P57087 298 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 PURAQ00577 322 aaKnown RBP10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 CACNB2Q08289 660 aaPredicted RBP10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 KIF22Q14807 665 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 PTPN14Q15678 1187 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 EEF1DP3Q658K8 133 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 LMBRD2Q68DH5 695 aaPredicted RBP10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 NFRKBQ6P4R8 1299 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 CDR2LQ86X02 465 aaPredicted RBP10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 IFNLR1Q8IU57 520 aaPredicted RBP10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 MAP7D2Q96T17 732 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 FAM49AQ9H0Q0 323 aaPredicted RBP10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 KIAA1586Q9HCI6 787 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 FBXL5Q9UKA1 691 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 EPN1Q9Y6I3 576 aaPredicted RBP10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 PTPRJQ12913 1337 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 ANK1P16157 1881 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 MBLAC1A4D2B0 266 aaPredicted RBP10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 RBAK-RBAKDNI3L0D1 243 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 PMM2O15305 246 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 C6orf222P0C671 652 aaPredicted RBP10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 DLATP10515 647 aaKnown RBP10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 CCND3P30281 292 aaPredicted RBP10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 TNFSF9P41273 254 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 GJA9P57773 515 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 MAP2K1Q02750 393 aaPredicted RBP10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 POU5F1BQ06416 359 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 PRPF4BQ13523 1007 aaKnown RBP10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 PSMD6Q15008 389 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 AMHR2Q16671 573 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 ATF7IP2Q5U623 682 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 RUFY4Q6ZNE9 571 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 TSHZ1Q6ZSZ6 1077 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 ARHGEF19Q8IW93 802 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 EHBP1Q8NDI1 1231 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 SYN2Q92777 582 aaPredicted RBP10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 SEMA4DQ92854 862 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 SPAG5Q96R06 1193 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 NUCKS1Q9H1E3 243 aaKnown RBP10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 UPF3AQ9H1J1 476 aaKnown RBP10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 TMEM8AQ9HCN3 771 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 PTPRHQ9HD43 1115 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 RBAKQ9NYW8 714 aaPredicted RBP10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 APEX2Q9UBZ4 518 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 SRRDQ9UH36 339 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 SCN10AQ9Y5Y9 1956 aa10.84□□□□□ -0.67
CACNA1A-216ENST00000635742 NRCAMQ92823 1304 aa10.83□□□□□ -0.67
CACNA1A-216ENST00000635742 ZNF263O14978 683 aa10.83□□□□□ -0.68
CACNA1A-216ENST00000635742 CLDN3O15551 220 aa10.83□□□□□ -0.68
CACNA1A-216ENST00000635742 SEPT4O43236 478 aa10.83□□□□□ -0.68
CACNA1A-216ENST00000635742 LDHAP00338 332 aaKnown RBP10.83□□□□□ -0.68
CACNA1A-216ENST00000635742 PGK1P00558 417 aa10.83□□□□□ -0.68
CACNA1A-216ENST00000635742 PRKAR2AP13861 404 aaKnown RBP10.83□□□□□ -0.68
CACNA1A-216ENST00000635742 CYLC1P35663 651 aaPredicted RBP10.83□□□□□ -0.68
CACNA1A-216ENST00000635742 MAP2K2P36507 400 aa10.83□□□□□ -0.68
CACNA1A-216ENST00000635742 EIF4A3P38919 411 aaKnown RBP10.83□□□□□ -0.68
CACNA1A-216ENST00000635742 ADAM17P78536 824 aa10.83□□□□□ -0.68
CACNA1A-216ENST00000635742 ZNF200P98182 395 aaPredicted RBP10.83□□□□□ -0.68
CACNA1A-216ENST00000635742 ARID5AQ03989 594 aa10.83□□□□□ -0.68
CACNA1A-216ENST00000635742 ENPEPQ07075 957 aa10.83□□□□□ -0.68
CACNA1A-216ENST00000635742 MCL1Q07820 350 aa10.83□□□□□ -0.68
CACNA1A-216ENST00000635742 TMEM62Q0P6H9 643 aa10.83□□□□□ -0.68
CACNA1A-216ENST00000635742 ASIC2Q16515 512 aa10.83□□□□□ -0.68
CACNA1A-216ENST00000635742 ZNF568Q3ZCX4 644 aa10.83□□□□□ -0.68
CACNA1A-216ENST00000635742 TDRD12Q587J7 1177 aaKnown RBP10.83□□□□□ -0.68
CACNA1A-216ENST00000635742 KRT39Q6A163 491 aa10.83□□□□□ -0.68
CACNA1A-216ENST00000635742 PHLDB3Q6NSJ2 640 aa10.83□□□□□ -0.68
CACNA1A-216ENST00000635742 MPZL3Q6UWV2 235 aa10.83□□□□□ -0.68
CACNA1A-216ENST00000635742 CCDC170Q8IYT3 715 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms