RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 SEC24DO94855 1032 aaPredicted RBP12.36□□□□□ -0.43
COL11A1-211ENST00000635193 TRIM49P0CI25 452 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 TRIM49CP0CI26 452 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 EIF2AK2P19525 551 aaKnown RBP12.36□□□□□ -0.43
COL11A1-211ENST00000635193 EFTUD2Q15029 972 aaKnown RBP eCLIP12.36□□□□□ -0.43
COL11A1-211ENST00000635193 RSRC2Q7L4I2 434 aaKnown RBP12.36□□□□□ -0.43
COL11A1-211ENST00000635193 RPF1Q9H9Y2 349 aaKnown RBP12.36□□□□□ -0.43
COL11A1-211ENST00000635193 KIAA1586Q9HCI6 787 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 PAPOLBQ9NRJ5 636 aaKnown RBP12.36□□□□□ -0.43
COL11A1-211ENST00000635193 SEL1LQ9UBV2 794 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 ATP11BQ9Y2G3 1177 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 TET3O43151 1660 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 BBOX1O75936 387 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 FAM160B2Q86V87 743 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 SIX6OS1Q8N1H7 587 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 C3orf20Q8ND61 904 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 VPS39Q96JC1 886 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 SUCLA2Q9P2R7 463 aaPredicted RBP12.36□□□□□ -0.43
COL11A1-211ENST00000635193 DBR1Q9UK59 544 aaKnown RBP12.36□□□□□ -0.43
COL11A1-211ENST00000635193 SMG5Q9UPR3 1016 aaKnown RBP12.36□□□□□ -0.43
COL11A1-211ENST00000635193 H0Y626 953 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 TRIM16O95361 564 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 SCARF1Q14162 830 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 TRIP10Q15642 601 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 TMED8Q6PL24 325 aaPredicted RBP12.36□□□□□ -0.43
COL11A1-211ENST00000635193 TMCO5AQ8N6Q1 288 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 ATL2Q8NHH9 583 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 PAWRQ96IZ0 340 aaKnown RBP12.36□□□□□ -0.43
COL11A1-211ENST00000635193 IL25Q9H293 177 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 GIMAP4Q9NUV9 329 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 PKD2L2Q9NZM6 624 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 CHMP2BQ9UQN3 213 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 INPP5FQ9Y2H2 1132 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 SLC16A4O15374 487 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 STAT3P40763 770 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 YWHAHQ04917 246 aaPredicted RBP12.36□□□□□ -0.43
COL11A1-211ENST00000635193 KPNB1Q14974 876 aaKnown RBP12.36□□□□□ -0.43
COL11A1-211ENST00000635193 ZNF667Q5HYK9 610 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 PDXDC2PQ6P474 469 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 KDM7AQ6ZMT4 941 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 SRBD1Q8N5C6 995 aaKnown RBP12.36□□□□□ -0.43
COL11A1-211ENST00000635193 SLC44A5Q8NCS7 719 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 SLC35G2Q8TBE7 412 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 PIGBQ92521 554 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 ARL8AQ96BM9 186 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 MTBPQ96DY7 904 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 RPS6KC1Q96S38 1066 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 SH3GL2Q99962 352 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 RANBP17Q9H2T7 1088 aaKnown RBP12.36□□□□□ -0.43
COL11A1-211ENST00000635193 CCDC134Q9H6E4 229 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 NPHS2Q9NP85 383 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 GID8Q9NWU2 228 aa12.36□□□□□ -0.43
COL11A1-211ENST00000635193 FOXP2O15409 715 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 FOXO4P98177 505 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 GADL1Q6ZQY3 521 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 EXT2Q93063 718 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 ISCUQ9H1K1 167 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 GTSE1Q9NYZ3 720 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 GTPBP10A4D1E9 387 aaKnown RBP12.35□□□□□ -0.43
COL11A1-211ENST00000635193 USP17L10C9JJH3 530 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 CDH16O75309 829 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 FDPSP14324 419 aaKnown RBP12.35□□□□□ -0.43
COL11A1-211ENST00000635193 ANXA13P27216 316 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 ARSEP51690 589 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 JAK3P52333 1124 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 ALDH18A1P54886 795 aaKnown RBP12.35□□□□□ -0.43
COL11A1-211ENST00000635193 SYDE1Q6ZW31 735 aaPredicted RBP12.35□□□□□ -0.43
COL11A1-211ENST00000635193 ADCK1Q86TW2 530 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 CEP95Q96GE4 821 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 FAM213AQ9BRX8 229 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 ALG13Q9NP73 1137 aaKnown RBP12.35□□□□□ -0.43
COL11A1-211ENST00000635193 UBN1Q9NPG3 1134 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 CDHR2Q9BYE9 1310 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 A0A1W2PQJ5 194 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 SLC4A1P02730 911 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 NPR1P16066 1061 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 CATSPER3Q86XQ3 398 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 MYCBPAPQ8TBZ2 947 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 IGDCC4Q8TDY8 1250 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 C7orf25Q9BPX7 421 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 DBNDD1Q9H9R9 158 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 OLFML3Q9NRN5 406 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 DDX56Q9NY93 547 aaKnown RBP12.35□□□□□ -0.43
COL11A1-211ENST00000635193 NRKQ7Z2Y5 1582 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 UBE4BO95155 1302 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 PNPLA7Q6ZV29 1317 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 PDXKO00764 312 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 RTN2O75298 545 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 CTDNEP1O95476 244 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 GNA15P30679 374 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 GALCP54803 685 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 BTKQ06187 659 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 USP49Q70CQ1 688 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 HOMEZQ8IX15 550 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 KIRREL3Q8IZU9 778 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 MARCH10Q8NA82 808 aaPredicted RBP12.35□□□□□ -0.43
COL11A1-211ENST00000635193 ATP6V0A4Q9HBG4 840 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 EMSYQ7Z589 1322 aa12.35□□□□□ -0.43
COL11A1-211ENST00000635193 CLTCL1P53675 1640 aa12.34□□□□□ -0.43
COL11A1-211ENST00000635193 KRT7P08729 469 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms