RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 TRIM16O95361 564 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 CHGBP05060 677 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 HEXBP07686 556 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 SNRPA1P09661 255 aaKnown RBP5.31□□□□□ -1.56
SDCBP-213ENST00000630925 HARSP12081 509 aaKnown RBP5.31□□□□□ -1.56
SDCBP-213ENST00000630925 HLA-DPA1P20036 260 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 NOS3P29474 1203 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 GPR3P46089 330 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 HSPA7P48741 367 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 ALDH9A1P49189 494 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 AGFG1P52594 562 aaKnown RBP5.31□□□□□ -1.56
SDCBP-213ENST00000630925 SLC12A3P55017 1021 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 COG7P83436 770 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 MAPK7Q13164 816 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 ADIPOQQ15848 244 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 MPEG1Q2M385 716 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 ALG11Q2TAA5 492 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 PROX2Q3B8N5 592 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 FLYWCH1Q4VC44 716 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 LRCH2Q5VUJ6 765 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 OTUD7BQ6GQQ9 843 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 MEX3BQ6ZN04 569 aaKnown RBP5.31□□□□□ -1.56
SDCBP-213ENST00000630925 ZNF765Q7L2R6 523 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 PIWIL3Q7Z3Z3 882 aaKnown RBP5.31□□□□□ -1.56
SDCBP-213ENST00000630925 RAB11FIP4Q86YS3 637 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 CAMKK1Q8N5S9 505 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 C1orf127Q8N9H9 656 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 KCTD6Q8NC69 237 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 GRIN3AQ8TCU5 1115 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 BRI3BPQ8WY22 251 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 TTC9Q92623 222 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 RILPL2Q969X0 211 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 ZUFSPQ96AP4 578 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 C8orf76Q96K31 380 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 CCDC43Q96MW1 224 aaKnown RBP5.31□□□□□ -1.56
SDCBP-213ENST00000630925 PYM1Q9BRP8 204 aaKnown RBP5.31□□□□□ -1.56
SDCBP-213ENST00000630925 CEP44Q9C0F1 390 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 TNMDQ9H2S6 317 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 ATP13A1Q9HD20 1204 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 CALCOCO1Q9P1Z2 691 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 LRFN1Q9P244 771 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 RIMKLBQ9ULI2 386 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 TMED5Q9Y3A6 229 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 DDX49Q9Y6V7 483 aaKnown RBP5.31□□□□□ -1.56
SDCBP-213ENST00000630925 ATP10BO94823 1461 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 RGS12O14924 1447 aa5.31□□□□□ -1.56
SDCBP-213ENST00000630925 NSD2O96028 1365 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 CFAP65Q6ZU64 1925 aaKnown RBP5.3□□□□□ -1.56
SDCBP-213ENST00000630925 A0A0G2JPF8 293 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 SLC12A8A0AV02 714 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 TMCO5BA8MYB1 307 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 HNRNPCL3B7ZW38 293 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 NT5C1B-RDH14C9J2C7 533 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 SGK1O00141 431 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 NPC1O15118 1278 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 RNF113AO15541 343 aaKnown RBP5.3□□□□□ -1.56
SDCBP-213ENST00000630925 CEP104O60308 925 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 DDHD2O94830 711 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 THP07101 528 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 SRGAP2CP0DJJ0 459 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 HNRNPCL4P0DMR1 293 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 TNNT1P13805 278 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 ALOX15P16050 662 aaPredicted RBP5.3□□□□□ -1.56
SDCBP-213ENST00000630925 IFNAR1P17181 557 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 PAMP19021 973 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 SOX6P35712 828 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 HTD2P86397 168 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 ACTN3Q08043 901 aaPredicted RBP5.3□□□□□ -1.56
SDCBP-213ENST00000630925 ADCY2Q08462 1091 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 TRPC3Q13507 836 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 DCAF17Q5H9S7 520 aaPredicted RBP5.3□□□□□ -1.56
SDCBP-213ENST00000630925 ARHGAP11AQ6P4F7 1023 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 MTDHQ86UE4 582 aaKnown RBP5.3□□□□□ -1.56
SDCBP-213ENST00000630925 MOGAT3Q86VF5 341 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 TCP11L2Q8N4U5 519 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 RNF152Q8N8N0 203 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 DENND6BQ8NEG7 585 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 ANKK1Q8NFD2 765 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 CEP70Q8NHQ1 597 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 TMEM40Q8WWA1 233 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 C1GALT1C1Q96EU7 318 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 ATP6V0BQ99437 205 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 TSEN34Q9BSV6 310 aaKnown RBP5.3□□□□□ -1.56
SDCBP-213ENST00000630925 PLVAPQ9BX97 442 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 ADAM19Q9H013 955 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 BTBD1Q9H0C5 482 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 DTNAQ9Y4J8 743 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 SYNMO15061 1565 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 TK2O00142 265 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 GLRX3O76003 335 aaKnown RBP5.3□□□□□ -1.56
SDCBP-213ENST00000630925 TMEM63AO94886 807 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 CSPG5O95196 566 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 ADCY5O95622 1261 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 GNL1P36915 607 aaPredicted RBP5.3□□□□□ -1.56
SDCBP-213ENST00000630925 USP8P40818 1118 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 MATR3P43243 847 aaKnown RBP eCLIP5.3□□□□□ -1.56
SDCBP-213ENST00000630925 MTIF2P46199 727 aaKnown RBP5.3□□□□□ -1.56
SDCBP-213ENST00000630925 HNMTP50135 292 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 CCR5P51681 352 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 PPP5CP53041 499 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms