RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 DSC1Q08554 894 aa12.23□□□□□ -0.45
DDX41-219ENST00000629036 DMP1Q13316 513 aaPredicted RBP12.23□□□□□ -0.45
DDX41-219ENST00000629036 PRPF4BQ13523 1007 aaKnown RBP12.23□□□□□ -0.45
DDX41-219ENST00000629036 NAB2Q15742 525 aa12.23□□□□□ -0.45
DDX41-219ENST00000629036 CSPP1Q1MSJ5 1256 aa12.23□□□□□ -0.45
DDX41-219ENST00000629036 NOMO2Q5JPE7 1267 aa12.23□□□□□ -0.45
DDX41-219ENST00000629036 RESP18Q5W5W9 173 aa12.23□□□□□ -0.45
DDX41-219ENST00000629036 ZNF280BQ86YH2 543 aa12.23□□□□□ -0.45
DDX41-219ENST00000629036 KCNG4Q8TDN1 519 aa12.23□□□□□ -0.45
DDX41-219ENST00000629036 LEO1Q8WVC0 666 aaPredicted RBP12.23□□□□□ -0.45
DDX41-219ENST00000629036 RSPH1Q8WYR4 309 aa12.23□□□□□ -0.45
DDX41-219ENST00000629036 STRA6Q9BX79 667 aa12.23□□□□□ -0.45
DDX41-219ENST00000629036 LMAN2LQ9H0V9 348 aa12.23□□□□□ -0.45
DDX41-219ENST00000629036 CDT1Q9H211 546 aa12.23□□□□□ -0.45
DDX41-219ENST00000629036 ALG13Q9NP73 1137 aaKnown RBP12.23□□□□□ -0.45
DDX41-219ENST00000629036 DNAJB4Q9UDY4 337 aa12.23□□□□□ -0.45
DDX41-219ENST00000629036 TNFSF13BQ9Y275 285 aa12.23□□□□□ -0.45
DDX41-219ENST00000629036 PCDHGC5Q9Y5F6 944 aa12.23□□□□□ -0.45
DDX41-219ENST00000629036 C2orf16Q68DN1 1984 aa12.23□□□□□ -0.45
DDX41-219ENST00000629036 DENND4AQ7Z401 1863 aa12.23□□□□□ -0.45
DDX41-219ENST00000629036 ARL5CA6NH57 179 aa12.22□□□□□ -0.45
DDX41-219ENST00000629036 PTGESO14684 152 aa12.22□□□□□ -0.45
DDX41-219ENST00000629036 N4BP3O15049 544 aa12.22□□□□□ -0.45
DDX41-219ENST00000629036 FAM189A1O60320 539 aa12.22□□□□□ -0.45
DDX41-219ENST00000629036 FGF18O76093 207 aa12.22□□□□□ -0.45
DDX41-219ENST00000629036 LAG3P18627 525 aa12.22□□□□□ -0.45
DDX41-219ENST00000629036 SSTR3P32745 418 aaPredicted RBP12.22□□□□□ -0.45
DDX41-219ENST00000629036 MLH1P40692 756 aa12.22□□□□□ -0.45
DDX41-219ENST00000629036 PLCB3Q01970 1234 aa12.22□□□□□ -0.45
DDX41-219ENST00000629036 DHX8Q14562 1220 aaKnown RBP12.22□□□□□ -0.45
DDX41-219ENST00000629036 ATF7IP2Q5U623 682 aa12.22□□□□□ -0.45
DDX41-219ENST00000629036 RRAGBQ5VZM2 374 aa12.22□□□□□ -0.45
DDX41-219ENST00000629036 SLC39A4Q6P5W5 647 aa12.22□□□□□ -0.45
DDX41-219ENST00000629036 KCNT2Q6UVM3 1135 aa12.22□□□□□ -0.45
DDX41-219ENST00000629036 GLB1LQ6UWU2 654 aa12.22□□□□□ -0.45
DDX41-219ENST00000629036 CEP120Q8N960 986 aa12.22□□□□□ -0.45
DDX41-219ENST00000629036 CNNM3Q8NE01 707 aa12.22□□□□□ -0.45
DDX41-219ENST00000629036 PGBD4Q96DM1 585 aa12.22□□□□□ -0.45
DDX41-219ENST00000629036 GAD1Q99259 594 aa12.22□□□□□ -0.45
DDX41-219ENST00000629036 TARS2Q9BW92 718 aaKnown RBP12.22□□□□□ -0.45
DDX41-219ENST00000629036 MRPL9Q9BYD2 267 aaKnown RBP12.22□□□□□ -0.45
DDX41-219ENST00000629036 FGFBP2Q9BYJ0 223 aa12.22□□□□□ -0.45
DDX41-219ENST00000629036 KMT5AQ9NQR1 393 aa12.22□□□□□ -0.45
DDX41-219ENST00000629036 KBTBD4Q9NVX7 518 aa12.22□□□□□ -0.45
DDX41-219ENST00000629036 MARCH5Q9NX47 278 aa12.22□□□□□ -0.45
DDX41-219ENST00000629036 DAXXQ9UER7 740 aaPredicted RBP12.22□□□□□ -0.45
DDX41-219ENST00000629036 SCN1AP35498 2009 aa12.21□□□□□ -0.45
DDX41-219ENST00000629036 ZNF318Q5VUA4 2279 aa12.21□□□□□ -0.45
DDX41-219ENST00000629036 FAM237AA0A1B0GTK4 181 aa12.21□□□□□ -0.45
DDX41-219ENST00000629036 CCDC169A6NNP5 214 aa12.21□□□□□ -0.45
DDX41-219ENST00000629036 F8W810 466 aa12.21□□□□□ -0.45
DDX41-219ENST00000629036 RECQL4O94761 1208 aa12.21□□□□□ -0.45
DDX41-219ENST00000629036 PIGRP01833 764 aa12.21□□□□□ -0.45
DDX41-219ENST00000629036 ITGA4P13612 1032 aa12.21□□□□□ -0.45
DDX41-219ENST00000629036 AKAP5P24588 427 aa12.21□□□□□ -0.45
DDX41-219ENST00000629036 SLC11A1P49279 550 aa12.21□□□□□ -0.45
DDX41-219ENST00000629036 SCNN1GP51170 649 aa12.21□□□□□ -0.45
DDX41-219ENST00000629036 BCAR1P56945 870 aa12.21□□□□□ -0.45
DDX41-219ENST00000629036 BECN1Q14457 450 aa12.21□□□□□ -0.45
DDX41-219ENST00000629036 CNNM4Q6P4Q7 775 aa12.21□□□□□ -0.45
DDX41-219ENST00000629036 CCDC73Q6ZRK6 1079 aa12.21□□□□□ -0.45
DDX41-219ENST00000629036 ADGRD2Q7Z7M1 963 aa12.21□□□□□ -0.45
DDX41-219ENST00000629036 COLGALT2Q8IYK4 626 aa12.21□□□□□ -0.45
DDX41-219ENST00000629036 RNF168Q8IYW5 571 aaPredicted RBP12.21□□□□□ -0.45
DDX41-219ENST00000629036 PDILTQ8N807 584 aa12.21□□□□□ -0.45
DDX41-219ENST00000629036 POF1BQ8WVV4 589 aa12.21□□□□□ -0.45
DDX41-219ENST00000629036 DDX12PQ92771 950 aa12.21□□□□□ -0.45
DDX41-219ENST00000629036 ZBTB45Q96K62 511 aaPredicted RBP12.21□□□□□ -0.45
DDX41-219ENST00000629036 FBXL18Q96ME1 805 aa12.21□□□□□ -0.45
DDX41-219ENST00000629036 IKZF4Q9H2S9 585 aa12.21□□□□□ -0.45
DDX41-219ENST00000629036 ST6GALNAC4Q9H4F1 302 aa12.21□□□□□ -0.45
DDX41-219ENST00000629036 PARVGQ9HBI0 331 aa12.21□□□□□ -0.45
DDX41-219ENST00000629036 CCDC39Q9UFE4 941 aa12.21□□□□□ -0.45
DDX41-219ENST00000629036 LZTS1Q9Y250 596 aa12.21□□□□□ -0.45
DDX41-219ENST00000629036 HPSEQ9Y251 543 aa12.21□□□□□ -0.45
DDX41-219ENST00000629036 INPP5FQ9Y2H2 1132 aa12.21□□□□□ -0.45
DDX41-219ENST00000629036 GIT1Q9Y2X7 761 aa12.21□□□□□ -0.45
DDX41-219ENST00000629036 RBM19Q9Y4C8 960 aaKnown RBP12.21□□□□□ -0.45
DDX41-219ENST00000629036 CFAP54Q96N23 3096 aa12.2□□□□□ -0.46
DDX41-219ENST00000629036 K7ERI5 159 aa12.2□□□□□ -0.46
DDX41-219ENST00000629036 GALTP07902 379 aa12.2□□□□□ -0.46
DDX41-219ENST00000629036 NMT1P30419 496 aaKnown RBP12.2□□□□□ -0.46
DDX41-219ENST00000629036 STAT6P42226 847 aa12.2□□□□□ -0.46
DDX41-219ENST00000629036 ERVFC1P60507 584 aa12.2□□□□□ -0.46
DDX41-219ENST00000629036 GTF2BQ00403 316 aa12.2□□□□□ -0.46
DDX41-219ENST00000629036 UBE3AQ05086 875 aa12.2□□□□□ -0.46
DDX41-219ENST00000629036 EHHADHQ08426 723 aa12.2□□□□□ -0.46
DDX41-219ENST00000629036 HYAL1Q12794 435 aa12.2□□□□□ -0.46
DDX41-219ENST00000629036 CTC1Q2NKJ3 1217 aa12.2□□□□□ -0.46
DDX41-219ENST00000629036 DCAF4L1Q3SXM0 396 aa12.2□□□□□ -0.46
DDX41-219ENST00000629036 TIGD5Q53EQ6 642 aa12.2□□□□□ -0.46
DDX41-219ENST00000629036 XKR4Q5GH76 650 aa12.2□□□□□ -0.46
DDX41-219ENST00000629036 TCEAL5Q5H9L2 206 aa12.2□□□□□ -0.46
DDX41-219ENST00000629036 ALKAL1Q6UXT8 129 aa12.2□□□□□ -0.46
DDX41-219ENST00000629036 HAUS6Q7Z4H7 955 aa12.2□□□□□ -0.46
DDX41-219ENST00000629036 SFR1Q86XK3 245 aa12.2□□□□□ -0.46
DDX41-219ENST00000629036 ABI1Q8IZP0 508 aa12.2□□□□□ -0.46
DDX41-219ENST00000629036 GJD3Q8N144 294 aa12.2□□□□□ -0.46
DDX41-219ENST00000629036 ZNF558Q96NG5 402 aa12.2□□□□□ -0.46
DDX41-219ENST00000629036 MRPL4Q9BYD3 311 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms