RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 KMT5BQ4FZB7 885 aa16.14■□□□□ 0.17
PNKP-221ENST00000627317 TAS1R3Q7RTX0 852 aa16.14■□□□□ 0.17
PNKP-221ENST00000627317 ZNF720Q7Z2F6 126 aa16.14■□□□□ 0.17
PNKP-221ENST00000627317 ZNF598Q86UK7 904 aaKnown RBP16.14■□□□□ 0.17
PNKP-221ENST00000627317 ELOA2Q8IYF1 753 aaPredicted RBP16.14■□□□□ 0.17
PNKP-221ENST00000627317 ATXN2LQ8WWM7 1075 aaKnown RBP16.14■□□□□ 0.17
PNKP-221ENST00000627317 HPS3Q969F9 1004 aa16.14■□□□□ 0.17
PNKP-221ENST00000627317 SMARCE1Q969G3 411 aa16.14■□□□□ 0.17
PNKP-221ENST00000627317 TRAIPQ9BWF2 469 aa16.14■□□□□ 0.17
PNKP-221ENST00000627317 COL25A1Q9BXS0 654 aaPredicted RBP16.14■□□□□ 0.17
PNKP-221ENST00000627317 ST6GALNAC4Q9H4F1 302 aa16.14■□□□□ 0.17
PNKP-221ENST00000627317 TBX20Q9UMR3 447 aa16.14■□□□□ 0.17
PNKP-221ENST00000627317 RWDD3Q9Y3V2 267 aa16.14■□□□□ 0.17
PNKP-221ENST00000627317 PCDHB13Q9Y5F0 798 aa16.14■□□□□ 0.17
PNKP-221ENST00000627317 BDP1A6H8Y1 2624 aa16.13■□□□□ 0.17
PNKP-221ENST00000627317 EDN1P05305 212 aa16.13■□□□□ 0.17
PNKP-221ENST00000627317 RB1P06400 928 aa16.13■□□□□ 0.17
PNKP-221ENST00000627317 MYBP10242 640 aa16.13■□□□□ 0.17
PNKP-221ENST00000627317 FGFR1P11362 822 aa16.13■□□□□ 0.17
PNKP-221ENST00000627317 HOXA11P31270 313 aaPredicted RBP16.13■□□□□ 0.17
PNKP-221ENST00000627317 GTF2BQ00403 316 aa16.13■□□□□ 0.17
PNKP-221ENST00000627317 GPM6BQ13491 265 aa16.13■□□□□ 0.17
PNKP-221ENST00000627317 COL19A1Q14993 1142 aa16.13■□□□□ 0.17
PNKP-221ENST00000627317 ZC2HC1CQ53FD0 456 aaPredicted RBP16.13■□□□□ 0.17
PNKP-221ENST00000627317 ATF7IP2Q5U623 682 aa16.13■□□□□ 0.17
PNKP-221ENST00000627317 APBB1IPQ7Z5R6 666 aaPredicted RBP16.13■□□□□ 0.17
PNKP-221ENST00000627317 MAP4K3Q8IVH8 894 aa16.13■□□□□ 0.17
PNKP-221ENST00000627317 KCNN1Q92952 543 aa16.13■□□□□ 0.17
PNKP-221ENST00000627317 ADPGKQ9BRR6 497 aa16.13■□□□□ 0.17
PNKP-221ENST00000627317 C11orf84Q9BUA3 381 aaPredicted RBP16.13■□□□□ 0.17
PNKP-221ENST00000627317 PLVAPQ9BX97 442 aa16.13■□□□□ 0.17
PNKP-221ENST00000627317 TRIM6Q9C030 488 aaPredicted RBP16.13■□□□□ 0.17
PNKP-221ENST00000627317 CLSTN2Q9H4D0 955 aa16.13■□□□□ 0.17
PNKP-221ENST00000627317 RMND1Q9NWS8 449 aa16.13■□□□□ 0.17
PNKP-221ENST00000627317 USP20Q9Y2K6 914 aa16.13■□□□□ 0.17
PNKP-221ENST00000627317 PCDHB7Q9Y5E2 793 aa16.13■□□□□ 0.17
PNKP-221ENST00000627317 NLRC5Q86WI3 1866 aa16.13■□□□□ 0.17
PNKP-221ENST00000627317 A0A0U1RQF3 1178 aa16.12■□□□□ 0.17
PNKP-221ENST00000627317 HNRNPDLO14979 420 aaKnown RBP16.12■□□□□ 0.17
PNKP-221ENST00000627317 GRM6O15303 877 aa16.12■□□□□ 0.17
PNKP-221ENST00000627317 PPP1R37O75864 691 aa16.12■□□□□ 0.17
PNKP-221ENST00000627317 PTMSP20962 102 aa16.12■□□□□ 0.17
PNKP-221ENST00000627317 LIG4P49917 911 aa16.12■□□□□ 0.17
PNKP-221ENST00000627317 RAB27AP51159 221 aa16.12■□□□□ 0.17
PNKP-221ENST00000627317 CASP5P51878 434 aa16.12■□□□□ 0.17
PNKP-221ENST00000627317 EHHADHQ08426 723 aa16.12■□□□□ 0.17
PNKP-221ENST00000627317 PSMD2Q13200 908 aa16.12■□□□□ 0.17
PNKP-221ENST00000627317 CAMK1Q14012 370 aa16.12■□□□□ 0.17
PNKP-221ENST00000627317 KCNB1Q14721 858 aa16.12■□□□□ 0.17
PNKP-221ENST00000627317 CAMK4Q16566 473 aa16.12■□□□□ 0.17
PNKP-221ENST00000627317 PAN2Q504Q3 1202 aaKnown RBP16.12■□□□□ 0.17
PNKP-221ENST00000627317 L1TD1Q5T7N2 865 aaKnown RBP16.12■□□□□ 0.17
PNKP-221ENST00000627317 NT5DC1Q5TFE4 455 aa16.12■□□□□ 0.17
PNKP-221ENST00000627317 SLC27A1Q6PCB7 646 aa16.12■□□□□ 0.17
PNKP-221ENST00000627317 ECHDC2Q86YB7 292 aa16.12■□□□□ 0.17
PNKP-221ENST00000627317 GPT2Q8TD30 523 aa16.12■□□□□ 0.17
PNKP-221ENST00000627317 ERCC4Q92889 916 aaPredicted RBP16.12■□□□□ 0.17
PNKP-221ENST00000627317 ASB2Q96Q27 587 aa16.12■□□□□ 0.17
PNKP-221ENST00000627317 ACCSQ96QU6 501 aa16.12■□□□□ 0.17
PNKP-221ENST00000627317 TARS2Q9BW92 718 aaKnown RBP16.12■□□□□ 0.17
PNKP-221ENST00000627317 FGFBP2Q9BYJ0 223 aa16.12■□□□□ 0.17
PNKP-221ENST00000627317 NUP62CLQ9H1M0 184 aa16.12■□□□□ 0.17
PNKP-221ENST00000627317 PDZD7Q9H5P4 517 aa16.12■□□□□ 0.17
PNKP-221ENST00000627317 SLC39A2Q9NP94 309 aa16.12■□□□□ 0.17
PNKP-221ENST00000627317 RNF216Q9NWF9 866 aaPredicted RBP16.12■□□□□ 0.17
PNKP-221ENST00000627317 HCSTQ9UBK5 93 aa16.12■□□□□ 0.17
PNKP-221ENST00000627317 LRFN2Q9ULH4 789 aa16.12■□□□□ 0.17
PNKP-221ENST00000627317 EXOC7Q9UPT5 735 aa16.12■□□□□ 0.17
PNKP-221ENST00000627317 UBE4BO95155 1302 aa16.12■□□□□ 0.17
PNKP-221ENST00000627317 KIAA1671Q9BY89 1806 aa16.12■□□□□ 0.17
PNKP-221ENST00000627317 A0A1B0GUA9 196 aa16.11■□□□□ 0.17
PNKP-221ENST00000627317 TTLL13PA6NNM8 815 aa16.11■□□□□ 0.17
PNKP-221ENST00000627317 EIF3DO15371 548 aaKnown RBP eCLIP16.11■□□□□ 0.17
PNKP-221ENST00000627317 RHOBTB3O94955 611 aa16.11■□□□□ 0.17
PNKP-221ENST00000627317 NPTXRO95502 500 aa16.11■□□□□ 0.17
PNKP-221ENST00000627317 SKIP12755 728 aa16.11■□□□□ 0.17
PNKP-221ENST00000627317 MATR3P43243 847 aaKnown RBP eCLIP16.11■□□□□ 0.17
PNKP-221ENST00000627317 TFF2Q03403 129 aa16.11■□□□□ 0.17
PNKP-221ENST00000627317 DCAF4L1Q3SXM0 396 aa16.11■□□□□ 0.17
PNKP-221ENST00000627317 ZNF568Q3ZCX4 644 aa16.11■□□□□ 0.17
PNKP-221ENST00000627317 TJAP1Q5JTD0 557 aa16.11■□□□□ 0.17
PNKP-221ENST00000627317 CLLU1OSQ5K130 101 aa16.11■□□□□ 0.17
PNKP-221ENST00000627317 ZPBP2Q6X784 338 aa16.11■□□□□ 0.17
PNKP-221ENST00000627317 CDR2LQ86X02 465 aaPredicted RBP16.11■□□□□ 0.17
PNKP-221ENST00000627317 SYCP3Q8IZU3 236 aa16.11■□□□□ 0.17
PNKP-221ENST00000627317 RNF169Q8NCN4 708 aa16.11■□□□□ 0.17
PNKP-221ENST00000627317 GLIS3Q8NEA6 775 aa16.11■□□□□ 0.17
PNKP-221ENST00000627317 P2RX5Q93086 422 aa16.11■□□□□ 0.17
PNKP-221ENST00000627317 CASD1Q96PB1 797 aa16.11■□□□□ 0.17
PNKP-221ENST00000627317 GSDMAQ96QA5 445 aa16.11■□□□□ 0.17
PNKP-221ENST00000627317 ACO2Q99798 780 aaKnown RBP16.11■□□□□ 0.17
PNKP-221ENST00000627317 FAM105AQ9NUU6 356 aa16.11■□□□□ 0.17
PNKP-221ENST00000627317 ANKFY1Q9P2R3 1169 aa16.11■□□□□ 0.17
PNKP-221ENST00000627317 TNFSF13BQ9Y275 285 aa16.11■□□□□ 0.17
PNKP-221ENST00000627317 PCDHA5Q9Y5H7 936 aa16.11■□□□□ 0.17
PNKP-221ENST00000627317 DLL1O00548 723 aa16.1■□□□□ 0.17
PNKP-221ENST00000627317 TOM1L1O75674 476 aa16.1■□□□□ 0.17
PNKP-221ENST00000627317 PRPF6O94906 941 aaKnown RBP16.1■□□□□ 0.17
PNKP-221ENST00000627317 ITGB1P05556 798 aa16.1■□□□□ 0.17
PNKP-221ENST00000627317 DNAJB1P25685 340 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms