RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 RTP3Q9BQQ7 232 aa18.34■□□□□ 0.53
TRIM29-221ENST00000627238 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.34■□□□□ 0.53
TRIM29-221ENST00000627238 BMP2KQ9NSY1 1161 aaPredicted RBP18.34■□□□□ 0.53
TRIM29-221ENST00000627238 MIOSQ9NXC5 875 aa18.34■□□□□ 0.53
TRIM29-221ENST00000627238 FNIP2Q9P278 1114 aa18.34■□□□□ 0.53
TRIM29-221ENST00000627238 TPCN1Q9ULQ1 816 aa18.34■□□□□ 0.53
TRIM29-221ENST00000627238 PRG3Q9Y2Y8 225 aaPredicted RBP18.34■□□□□ 0.53
TRIM29-221ENST00000627238 ZNF292O60281 2723 aa18.34■□□□□ 0.53
TRIM29-221ENST00000627238 CLUHO75153 1309 aa18.33■□□□□ 0.53
TRIM29-221ENST00000627238 CCDC195A0A1B0GUA6 201 aa18.33■□□□□ 0.52
TRIM29-221ENST00000627238 SPDYE4A6NLX3 237 aa18.33■□□□□ 0.52
TRIM29-221ENST00000627238 NR1I2O75469 434 aa18.33■□□□□ 0.52
TRIM29-221ENST00000627238 XRCC6P12956 609 aaKnown RBP eCLIP18.33■□□□□ 0.52
TRIM29-221ENST00000627238 SCNN1GP51170 649 aa18.33■□□□□ 0.52
TRIM29-221ENST00000627238 TPH2Q8IWU9 490 aa18.33■□□□□ 0.52
TRIM29-221ENST00000627238 CCDC105Q8IYK2 499 aa18.33■□□□□ 0.52
TRIM29-221ENST00000627238 HACE1Q8IYU2 909 aa18.33■□□□□ 0.52
TRIM29-221ENST00000627238 ZNF707Q96C28 371 aaPredicted RBP18.33■□□□□ 0.52
TRIM29-221ENST00000627238 ZFP42Q96MM3 310 aa18.33■□□□□ 0.52
TRIM29-221ENST00000627238 COLEC11Q9BWP8 271 aa18.33■□□□□ 0.52
TRIM29-221ENST00000627238 ZDHHC7Q9NXF8 308 aa18.33■□□□□ 0.52
TRIM29-221ENST00000627238 WNT16Q9UBV4 365 aa18.33■□□□□ 0.52
TRIM29-221ENST00000627238 DAXXQ9UER7 740 aaPredicted RBP18.33■□□□□ 0.52
TRIM29-221ENST00000627238 PCDHA12Q9UN75 941 aa18.33■□□□□ 0.52
TRIM29-221ENST00000627238 HES2Q9Y543 173 aa18.33■□□□□ 0.52
TRIM29-221ENST00000627238 GVINP1Q7Z2Y8 2422 aa18.33■□□□□ 0.52
TRIM29-221ENST00000627238 A0A1B0GUA9 196 aa18.32■□□□□ 0.52
TRIM29-221ENST00000627238 INO80B-WBP1J3KQ70 363 aa18.32■□□□□ 0.52
TRIM29-221ENST00000627238 C2CD2LO14523 706 aa18.32■□□□□ 0.52
TRIM29-221ENST00000627238 FDPSP14324 419 aaKnown RBP18.32■□□□□ 0.52
TRIM29-221ENST00000627238 KRT2P35908 639 aa18.32■□□□□ 0.52
TRIM29-221ENST00000627238 RARRES1P49788 294 aa18.32■□□□□ 0.52
TRIM29-221ENST00000627238 ANAPC15P60006 121 aa18.32■□□□□ 0.52
TRIM29-221ENST00000627238 CREMQ03060 361 aa18.32■□□□□ 0.52
TRIM29-221ENST00000627238 NR5A1Q13285 461 aa18.32■□□□□ 0.52
TRIM29-221ENST00000627238 ANKRD1Q15327 319 aa18.32■□□□□ 0.52
TRIM29-221ENST00000627238 SLC27A1Q6PCB7 646 aa18.32■□□□□ 0.52
TRIM29-221ENST00000627238 LILRA6Q6PI73 481 aa18.32■□□□□ 0.52
TRIM29-221ENST00000627238 PPP4R3CPQ6ZMV5 832 aa18.32■□□□□ 0.52
TRIM29-221ENST00000627238 ASAP3Q8TDY4 903 aa18.32■□□□□ 0.52
TRIM29-221ENST00000627238 CPB2Q96IY4 423 aa18.32■□□□□ 0.52
TRIM29-221ENST00000627238 ORC3Q9UBD5 711 aaPredicted RBP18.32■□□□□ 0.52
TRIM29-221ENST00000627238 FAM205CA6NFA0 338 aa18.31■□□□□ 0.52
TRIM29-221ENST00000627238 GLRA2P23416 452 aa18.31■□□□□ 0.52
TRIM29-221ENST00000627238 GRIK3Q13003 919 aa18.31■□□□□ 0.52
TRIM29-221ENST00000627238 USP41Q3LFD5 358 aa18.31■□□□□ 0.52
TRIM29-221ENST00000627238 FUT10Q6P4F1 479 aa18.31■□□□□ 0.52
TRIM29-221ENST00000627238 FLCNQ8NFG4 579 aa18.31■□□□□ 0.52
TRIM29-221ENST00000627238 PRIMPOLQ96LW4 560 aa18.31■□□□□ 0.52
TRIM29-221ENST00000627238 NT5C3AQ9H0P0 336 aa18.31■□□□□ 0.52
TRIM29-221ENST00000627238 NXF3Q9H4D5 531 aaKnown RBP18.31■□□□□ 0.52
TRIM29-221ENST00000627238 BRMS1Q9HCU9 246 aa18.31■□□□□ 0.52
TRIM29-221ENST00000627238 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.31■□□□□ 0.52
TRIM29-221ENST00000627238 ADAM28Q9UKQ2 775 aa18.31■□□□□ 0.52
TRIM29-221ENST00000627238 F8W810 466 aa18.3■□□□□ 0.52
TRIM29-221ENST00000627238 TGM5O43548 720 aa18.3■□□□□ 0.52
TRIM29-221ENST00000627238 PI15O43692 258 aa18.3■□□□□ 0.52
TRIM29-221ENST00000627238 FOXK2Q01167 660 aa18.3■□□□□ 0.52
TRIM29-221ENST00000627238 CALCRLQ16602 461 aa18.3■□□□□ 0.52
TRIM29-221ENST00000627238 FAM187BQ17R55 369 aa18.3■□□□□ 0.52
TRIM29-221ENST00000627238 NKD2Q969F2 451 aaPredicted RBP18.3■□□□□ 0.52
TRIM29-221ENST00000627238 MTMR9Q96QG7 549 aa18.3■□□□□ 0.52
TRIM29-221ENST00000627238 GPR62Q9BZJ7 368 aa18.3■□□□□ 0.52
TRIM29-221ENST00000627238 TRIM6Q9C030 488 aaPredicted RBP18.3■□□□□ 0.52
TRIM29-221ENST00000627238 TTC12Q9H892 705 aaPredicted RBP18.3■□□□□ 0.52
TRIM29-221ENST00000627238 RFPL2O75678 378 aa18.29■□□□□ 0.52
TRIM29-221ENST00000627238 SRFP11831 508 aa18.29■□□□□ 0.52
TRIM29-221ENST00000627238 CDCA2Q69YH5 1023 aaPredicted RBP18.29■□□□□ 0.52
TRIM29-221ENST00000627238 SIX5Q8N196 739 aa18.29■□□□□ 0.52
TRIM29-221ENST00000627238 SLC44A3Q8N4M1 653 aa18.29■□□□□ 0.52
TRIM29-221ENST00000627238 DTWD2Q8NBA8 298 aa18.29■□□□□ 0.52
TRIM29-221ENST00000627238 SMG7Q92540 1137 aaKnown RBP18.29■□□□□ 0.52
TRIM29-221ENST00000627238 MYADMQ96S97 322 aa18.29■□□□□ 0.52
TRIM29-221ENST00000627238 PRKD2Q9BZL6 878 aa18.29■□□□□ 0.52
TRIM29-221ENST00000627238 FBXL21Q9UKT6 434 aa18.29■□□□□ 0.52
TRIM29-221ENST00000627238 KRBA1A5PL33 1030 aa18.28■□□□□ 0.52
TRIM29-221ENST00000627238 ANHXE9PGG2 379 aa18.28■□□□□ 0.52
TRIM29-221ENST00000627238 B4GALT5O43286 388 aa18.28■□□□□ 0.52
TRIM29-221ENST00000627238 NARSO43776 548 aaKnown RBP18.28■□□□□ 0.52
TRIM29-221ENST00000627238 NEMFO60524 1076 aa18.28■□□□□ 0.52
TRIM29-221ENST00000627238 GBP2P32456 591 aaPredicted RBP18.28■□□□□ 0.52
TRIM29-221ENST00000627238 PHLDB3Q6NSJ2 640 aa18.28■□□□□ 0.52
TRIM29-221ENST00000627238 FRMD5Q7Z6J6 570 aa18.28■□□□□ 0.52
TRIM29-221ENST00000627238 FZD8Q9H461 694 aa18.28■□□□□ 0.52
TRIM29-221ENST00000627238 PRMT7Q9NVM4 692 aaPredicted RBP18.28■□□□□ 0.52
TRIM29-221ENST00000627238 ZFP37Q9Y6Q3 630 aaPredicted RBP18.28■□□□□ 0.52
TRIM29-221ENST00000627238 FRYLO94915 3013 aa18.28■□□□□ 0.52
TRIM29-221ENST00000627238 SF3B1O75533 1304 aaKnown RBP eCLIP18.27■□□□□ 0.52
TRIM29-221ENST00000627238 DNAH14Q0VDD8 3507 aa18.27■□□□□ 0.52
TRIM29-221ENST00000627238 ZMYND10O75800 440 aa18.27■□□□□ 0.52
TRIM29-221ENST00000627238 NPTXRO95502 500 aa18.27■□□□□ 0.52
TRIM29-221ENST00000627238 SPATA31C1P0DKV0 1188 aa18.27■□□□□ 0.52
TRIM29-221ENST00000627238 LAMP2P13473 410 aa18.27■□□□□ 0.52
TRIM29-221ENST00000627238 AKAP5P24588 427 aa18.27■□□□□ 0.52
TRIM29-221ENST00000627238 ANGPT1Q15389 498 aa18.27■□□□□ 0.52
TRIM29-221ENST00000627238 MCPH1Q8NEM0 835 aa18.27■□□□□ 0.52
TRIM29-221ENST00000627238 RSAD2Q8WXG1 361 aa18.27■□□□□ 0.52
TRIM29-221ENST00000627238 GTF3C6Q969F1 213 aa18.27■□□□□ 0.52
TRIM29-221ENST00000627238 APOL6Q9BWW8 343 aa18.27■□□□□ 0.52
TRIM29-221ENST00000627238 POLR3FQ9H1D9 316 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms