RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 FAM71AQ8IYT1 594 aa23.85■■□□□ 1.41
PNKP-220ENST00000627232 ABRAQ8N0Z2 381 aa23.85■■□□□ 1.41
PNKP-220ENST00000627232 COG1Q8WTW3 980 aa23.85■■□□□ 1.41
PNKP-220ENST00000627232 SHC3Q92529 594 aa23.85■■□□□ 1.41
PNKP-220ENST00000627232 SPATA33Q96N06 139 aa23.85■■□□□ 1.41
PNKP-220ENST00000627232 RHOXF2Q9BQY4 288 aa23.85■■□□□ 1.41
PNKP-220ENST00000627232 JPH2Q9BR39 696 aaPredicted RBP23.85■■□□□ 1.41
PNKP-220ENST00000627232 EFCC1Q9HA90 598 aa23.85■■□□□ 1.41
PNKP-220ENST00000627232 RAB20Q9NX57 234 aa23.85■■□□□ 1.41
PNKP-220ENST00000627232 IGKV6-21A0A0C4DH24 114 aa23.84■■□□□ 1.41
PNKP-220ENST00000627232 TARSL2A2RTX5 802 aaKnown RBP23.84■■□□□ 1.41
PNKP-220ENST00000627232 NCK2O43639 380 aa23.84■■□□□ 1.41
PNKP-220ENST00000627232 LRRN2O75325 713 aa23.84■■□□□ 1.41
PNKP-220ENST00000627232 ERLIN1O75477 346 aa23.84■■□□□ 1.41
PNKP-220ENST00000627232 TXNP10599 105 aaKnown RBP23.84■■□□□ 1.41
PNKP-220ENST00000627232 MCM3P25205 808 aa23.84■■□□□ 1.41
PNKP-220ENST00000627232 PAFAH1B1P43034 410 aa23.84■■□□□ 1.41
PNKP-220ENST00000627232 ZNF792Q3KQV3 632 aa23.84■■□□□ 1.41
PNKP-220ENST00000627232 HSDL1Q3SXM5 330 aa23.84■■□□□ 1.41
PNKP-220ENST00000627232 WDR93Q6P2C0 686 aa23.84■■□□□ 1.41
PNKP-220ENST00000627232 C15orf39Q6ZRI6 1047 aa23.84■■□□□ 1.41
PNKP-220ENST00000627232 SV2AQ7L0J3 742 aa23.84■■□□□ 1.41
PNKP-220ENST00000627232 MMGT1Q8N4V1 131 aa23.84■■□□□ 1.41
PNKP-220ENST00000627232 PNKPQ96T60 521 aa23.84■■□□□ 1.41
PNKP-220ENST00000627232 SMARCAD1Q9H4L7 1026 aa23.84■■□□□ 1.41
PNKP-220ENST00000627232 MORF4L1Q9UBU8 362 aa23.84■■□□□ 1.41
PNKP-220ENST00000627232 CCL15-CCL14A0A0B4J2E2 113 aa23.84■■□□□ 1.41
PNKP-220ENST00000627232 CES2O00748 559 aa23.84■■□□□ 1.41
PNKP-220ENST00000627232 NOP2P46087 812 aaKnown RBP23.84■■□□□ 1.41
PNKP-220ENST00000627232 MXD4Q14582 209 aaPredicted RBP23.84■■□□□ 1.41
PNKP-220ENST00000627232 PLCB4Q15147 1175 aa23.84■■□□□ 1.41
PNKP-220ENST00000627232 CCL15Q16663 113 aa23.84■■□□□ 1.41
PNKP-220ENST00000627232 MAP1SQ66K74 1059 aaPredicted RBP23.84■■□□□ 1.41
PNKP-220ENST00000627232 ARMCX2Q7L311 632 aa23.84■■□□□ 1.41
PNKP-220ENST00000627232 ENOSF1Q7L5Y1 443 aa23.84■■□□□ 1.41
PNKP-220ENST00000627232 LRRC57Q8N9N7 239 aa23.84■■□□□ 1.41
PNKP-220ENST00000627232 TPCN2Q8NHX9 752 aa23.84■■□□□ 1.41
PNKP-220ENST00000627232 HELQQ8TDG4 1101 aa23.84■■□□□ 1.41
PNKP-220ENST00000627232 KREMEN1Q96MU8 473 aa23.84■■□□□ 1.41
PNKP-220ENST00000627232 POP1Q99575 1024 aaKnown RBP23.84■■□□□ 1.41
PNKP-220ENST00000627232 ZNF408Q9H9D4 720 aa23.84■■□□□ 1.41
PNKP-220ENST00000627232 TOPORSQ9NS56 1045 aaPredicted RBP23.84■■□□□ 1.41
PNKP-220ENST00000627232 BTBD19C9JJ37 291 aa23.83■■□□□ 1.41
PNKP-220ENST00000627232 STRNO43815 780 aa23.83■■□□□ 1.41
PNKP-220ENST00000627232 CCDC181Q5TID7 509 aa23.83■■□□□ 1.41
PNKP-220ENST00000627232 ZPBP2Q6X784 338 aa23.83■■□□□ 1.41
PNKP-220ENST00000627232 ZNF467Q7Z7K2 595 aaPredicted RBP23.83■■□□□ 1.41
PNKP-220ENST00000627232 SLFN11Q7Z7L1 901 aa23.83■■□□□ 1.41
PNKP-220ENST00000627232 SYCE1Q8N0S2 351 aa23.83■■□□□ 1.41
PNKP-220ENST00000627232 PPM1KQ8N3J5 372 aa23.83■■□□□ 1.41
PNKP-220ENST00000627232 TAS1R2Q8TE23 839 aa23.83■■□□□ 1.41
PNKP-220ENST00000627232 PRPF31Q8WWY3 499 aaKnown RBP23.83■■□□□ 1.41
PNKP-220ENST00000627232 CALR3Q96L12 384 aaKnown RBP23.83■■□□□ 1.41
PNKP-220ENST00000627232 VTA1Q9NP79 307 aa23.83■■□□□ 1.41
PNKP-220ENST00000627232 A0A0B4J269 797 aa23.82■■□□□ 1.4
PNKP-220ENST00000627232 ZBTB42B2RXF5 422 aa23.82■■□□□ 1.4
PNKP-220ENST00000627232 FTCDO95954 541 aa23.82■■□□□ 1.4
PNKP-220ENST00000627232 POTEJP0CG39 1038 aa23.82■■□□□ 1.4
PNKP-220ENST00000627232 DLATP10515 647 aaKnown RBP23.82■■□□□ 1.4
PNKP-220ENST00000627232 CDCA2Q69YH5 1023 aaPredicted RBP23.82■■□□□ 1.4
PNKP-220ENST00000627232 CCDC70Q6NSX1 233 aa23.82■■□□□ 1.4
PNKP-220ENST00000627232 RFFLQ8WZ73 363 aa23.82■■□□□ 1.4
PNKP-220ENST00000627232 FNBP1Q96RU3 617 aa23.82■■□□□ 1.4
PNKP-220ENST00000627232 ARID3AQ99856 593 aa23.82■■□□□ 1.4
PNKP-220ENST00000627232 TARS2Q9BW92 718 aaKnown RBP23.82■■□□□ 1.4
PNKP-220ENST00000627232 GBA2Q9HCG7 927 aaPredicted RBP23.82■■□□□ 1.4
PNKP-220ENST00000627232 ADGRA2Q96PE1 1338 aa23.81■■□□□ 1.4
PNKP-220ENST00000627232 ANKRD62A6NC57 917 aa23.81■■□□□ 1.4
PNKP-220ENST00000627232 HBP1O60381 514 aa23.81■■□□□ 1.4
PNKP-220ENST00000627232 PRPF4BQ13523 1007 aaKnown RBP23.81■■□□□ 1.4
PNKP-220ENST00000627232 CFAP221Q4G0U5 840 aa23.81■■□□□ 1.4
PNKP-220ENST00000627232 BRI3BPQ8WY22 251 aa23.81■■□□□ 1.4
PNKP-220ENST00000627232 CTNNBL1Q8WYA6 563 aaPredicted RBP23.81■■□□□ 1.4
PNKP-220ENST00000627232 RUBCNQ92622 972 aa23.81■■□□□ 1.4
PNKP-220ENST00000627232 KAT5Q92993 513 aa23.81■■□□□ 1.4
PNKP-220ENST00000627232 MSTO1Q9BUK6 570 aa23.81■■□□□ 1.4
PNKP-220ENST00000627232 HAPLN2Q9GZV7 340 aa23.81■■□□□ 1.4
PNKP-220ENST00000627232 CCDC113Q9H0I3 377 aa23.81■■□□□ 1.4
PNKP-220ENST00000627232 C2orf40Q9H1Z8 148 aa23.81■■□□□ 1.4
PNKP-220ENST00000627232 RBM47A0AV96 593 aaKnown RBP23.8■■□□□ 1.4
PNKP-220ENST00000627232 MARK3P27448 753 aa23.8■■□□□ 1.4
PNKP-220ENST00000627232 NLRP11P59045 1033 aaKnown RBP23.8■■□□□ 1.4
PNKP-220ENST00000627232 GCNT1Q02742 428 aa23.8■■□□□ 1.4
PNKP-220ENST00000627232 LAMC2Q13753 1193 aa23.8■■□□□ 1.4
PNKP-220ENST00000627232 TCEAL1Q15170 157 aa23.8■■□□□ 1.4
PNKP-220ENST00000627232 RPS6KA1Q15418 735 aa23.8■■□□□ 1.4
PNKP-220ENST00000627232 CRELD2Q6UXH1 353 aaPredicted RBP23.8■■□□□ 1.4
PNKP-220ENST00000627232 SPATA4Q8NEY3 305 aa23.8■■□□□ 1.4
PNKP-220ENST00000627232 TAF4BQ92750 862 aa23.8■■□□□ 1.4
PNKP-220ENST00000627232 COPS5Q92905 334 aa23.8■■□□□ 1.4
PNKP-220ENST00000627232 ISCUQ9H1K1 167 aa23.8■■□□□ 1.4
PNKP-220ENST00000627232 PDGFCQ9NRA1 345 aa23.8■■□□□ 1.4
PNKP-220ENST00000627232 NOCTQ9UK39 431 aaKnown RBP23.8■■□□□ 1.4
PNKP-220ENST00000627232 SEC31AO94979 1220 aaKnown RBP23.79■■□□□ 1.4
PNKP-220ENST00000627232 KIF4AO95239 1232 aa23.79■■□□□ 1.4
PNKP-220ENST00000627232 GZMAP12544 262 aa23.79■■□□□ 1.4
PNKP-220ENST00000627232 ADORA2AP29274 412 aa23.79■■□□□ 1.4
PNKP-220ENST00000627232 C2orf54Q08AI8 447 aa23.79■■□□□ 1.4
PNKP-220ENST00000627232 LAMTOR4Q0VGL1 99 aa23.79■■□□□ 1.4
PNKP-220ENST00000627232 MKRN4PQ13434 485 aaPredicted RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms