RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 Q9UFV3 132 aa4.33□□□□□ -1.72
CDKL5-208ENST00000624953 TMPRSS11EQ9UL52 423 aa4.33□□□□□ -1.72
CDKL5-208ENST00000624953 PRKAB1Q9Y478 270 aa4.33□□□□□ -1.72
CDKL5-208ENST00000624953 CTDP1Q9Y5B0 961 aaPredicted RBP4.33□□□□□ -1.72
CDKL5-208ENST00000624953 PPIP5K1Q6PFW1 1433 aa4.32□□□□□ -1.72
CDKL5-208ENST00000624953 PATE3B3GLJ2 98 aa4.32□□□□□ -1.72
CDKL5-208ENST00000624953 K7ESF4 209 aa4.32□□□□□ -1.72
CDKL5-208ENST00000624953 ELL2O00472 640 aaPredicted RBP4.32□□□□□ -1.72
CDKL5-208ENST00000624953 FKBP9O95302 570 aa4.32□□□□□ -1.72
CDKL5-208ENST00000624953 GCP02774 474 aa4.32□□□□□ -1.72
CDKL5-208ENST00000624953 CYP1A1P04798 512 aaPredicted RBP4.32□□□□□ -1.72
CDKL5-208ENST00000624953 MYCLP1P12525 358 aaPredicted RBP4.32□□□□□ -1.72
CDKL5-208ENST00000624953 RGS3P49796 1198 aa4.32□□□□□ -1.72
CDKL5-208ENST00000624953 ANTXR2P58335 489 aa4.32□□□□□ -1.72
CDKL5-208ENST00000624953 SLC6A3Q01959 620 aa4.32□□□□□ -1.72
CDKL5-208ENST00000624953 ROM1Q03395 351 aa4.32□□□□□ -1.72
CDKL5-208ENST00000624953 TTC38Q5R3I4 469 aa4.32□□□□□ -1.72
CDKL5-208ENST00000624953 ZBTB41Q5SVQ8 909 aa4.32□□□□□ -1.72
CDKL5-208ENST00000624953 AGBL4Q5VU57 503 aa4.32□□□□□ -1.72
CDKL5-208ENST00000624953 SLFN13Q68D06 897 aa4.32□□□□□ -1.72
CDKL5-208ENST00000624953 GRAMD4Q6IC98 578 aa4.32□□□□□ -1.72
CDKL5-208ENST00000624953 EP400NLQ6ZTU2 488 aa4.32□□□□□ -1.72
CDKL5-208ENST00000624953 FKBP9P1Q75LS8 142 aa4.32□□□□□ -1.72
CDKL5-208ENST00000624953 STRA8Q7Z7C7 330 aa4.32□□□□□ -1.72
CDKL5-208ENST00000624953 FERMT3Q86UX7 667 aa4.32□□□□□ -1.72
CDKL5-208ENST00000624953 FAM124AQ86V42 546 aa4.32□□□□□ -1.72
CDKL5-208ENST00000624953 HIPK4Q8NE63 616 aa4.32□□□□□ -1.72
CDKL5-208ENST00000624953 OR5AN1Q8NGI8 311 aa4.32□□□□□ -1.72
CDKL5-208ENST00000624953 SEMA4AQ9H3S1 761 aa4.32□□□□□ -1.72
CDKL5-208ENST00000624953 CAAP1Q9H8G2 361 aa4.32□□□□□ -1.72
CDKL5-208ENST00000624953 EMC7Q9NPA0 242 aa4.32□□□□□ -1.72
CDKL5-208ENST00000624953 POGKQ9P215 609 aa4.32□□□□□ -1.72
CDKL5-208ENST00000624953 VWA7Q9Y334 891 aa4.32□□□□□ -1.72
CDKL5-208ENST00000624953 MYH14Q7Z406 1995 aaKnown RBP4.32□□□□□ -1.72
CDKL5-208ENST00000624953 CACNA1SQ13698 1873 aa4.32□□□□□ -1.72
CDKL5-208ENST00000624953 COL5A3P25940 1745 aaPredicted RBP4.32□□□□□ -1.72
CDKL5-208ENST00000624953 NSD2O96028 1365 aa4.31□□□□□ -1.72
CDKL5-208ENST00000624953 TNRC18O15417 2968 aaPredicted RBP4.31□□□□□ -1.72
CDKL5-208ENST00000624953 PNPLA7Q6ZV29 1317 aa4.31□□□□□ -1.72
CDKL5-208ENST00000624953 WDR17Q8IZU2 1322 aa4.31□□□□□ -1.72
CDKL5-208ENST00000624953 A0A0A6YYK5 440 aaPredicted RBP4.31□□□□□ -1.72
CDKL5-208ENST00000624953 UBA6A0AVT1 1052 aaPredicted RBP4.31□□□□□ -1.72
CDKL5-208ENST00000624953 ZEB2O60315 1214 aa4.31□□□□□ -1.72
CDKL5-208ENST00000624953 GAS7O60861 476 aa4.31□□□□□ -1.72
CDKL5-208ENST00000624953 KRT37O76014 449 aa4.31□□□□□ -1.72
CDKL5-208ENST00000624953 NEK4P51957 841 aa4.31□□□□□ -1.72
CDKL5-208ENST00000624953 EVA1CP58658 441 aa4.31□□□□□ -1.72
CDKL5-208ENST00000624953 ZNF174Q15697 407 aa4.31□□□□□ -1.72
CDKL5-208ENST00000624953 DDB1Q16531 1140 aa4.31□□□□□ -1.72
CDKL5-208ENST00000624953 RNF151Q2KHN1 245 aa4.31□□□□□ -1.72
CDKL5-208ENST00000624953 WDR72Q3MJ13 1102 aa4.31□□□□□ -1.72
CDKL5-208ENST00000624953 KIAA1841Q6NSI8 718 aa4.31□□□□□ -1.72
CDKL5-208ENST00000624953 RALYLQ86SE5 291 aaKnown RBP4.31□□□□□ -1.72
CDKL5-208ENST00000624953 PHYKPLQ8IUZ5 450 aa4.31□□□□□ -1.72
CDKL5-208ENST00000624953 OR2W6PQ8NHA6 318 aa4.31□□□□□ -1.72
CDKL5-208ENST00000624953 ZNF496Q96IT1 587 aaPredicted RBP4.31□□□□□ -1.72
CDKL5-208ENST00000624953 WWC2-AS2Q96NR7 200 aa4.31□□□□□ -1.72
CDKL5-208ENST00000624953 SAMD11Q96NU1 681 aa4.31□□□□□ -1.72
CDKL5-208ENST00000624953 SOX7Q9BT81 388 aa4.31□□□□□ -1.72
CDKL5-208ENST00000624953 CDK19Q9BWU1 502 aa4.31□□□□□ -1.72
CDKL5-208ENST00000624953 THG1LQ9NWX6 298 aaKnown RBP4.31□□□□□ -1.72
CDKL5-208ENST00000624953 KCMF1Q9P0J7 381 aa4.31□□□□□ -1.72
CDKL5-208ENST00000624953 ZKSCAN5Q9Y2L8 839 aa4.31□□□□□ -1.72
CDKL5-208ENST00000624953 DLEC1Q9Y238 1755 aa4.31□□□□□ -1.72
CDKL5-208ENST00000624953 TIAM2Q8IVF5 1701 aa4.31□□□□□ -1.72
CDKL5-208ENST00000624953 TNRC6CQ9HCJ0 1690 aaKnown RBP4.31□□□□□ -1.72
CDKL5-208ENST00000624953 DICER1Q9UPY3 1922 aaKnown RBP4.31□□□□□ -1.72
CDKL5-208ENST00000624953 AFDNP55196 1824 aaKnown RBP4.3□□□□□ -1.72
CDKL5-208ENST00000624953 NEMP1O14524 444 aa4.3□□□□□ -1.72
CDKL5-208ENST00000624953 SEC24DO94855 1032 aaPredicted RBP4.3□□□□□ -1.72
CDKL5-208ENST00000624953 PFKMP08237 780 aa4.3□□□□□ -1.72
CDKL5-208ENST00000624953 CD40P25942 277 aa4.3□□□□□ -1.72
CDKL5-208ENST00000624953 BCAR1P56945 870 aa4.3□□□□□ -1.72
CDKL5-208ENST00000624953 OCRLQ01968 901 aa4.3□□□□□ -1.72
CDKL5-208ENST00000624953 NOLC1Q14978 699 aaKnown RBP eCLIP4.3□□□□□ -1.72
CDKL5-208ENST00000624953 PCOLCEQ15113 449 aa4.3□□□□□ -1.72
CDKL5-208ENST00000624953 CDSNQ15517 529 aa4.3□□□□□ -1.72
CDKL5-208ENST00000624953 ZMAT1Q5H9K5 638 aa4.3□□□□□ -1.72
CDKL5-208ENST00000624953 UBXN11Q5T124 520 aa4.3□□□□□ -1.72
CDKL5-208ENST00000624953 SLFN12LQ6IEE8 588 aa4.3□□□□□ -1.72
CDKL5-208ENST00000624953 DBX2Q6ZNG2 339 aa4.3□□□□□ -1.72
CDKL5-208ENST00000624953 GPR155Q7Z3F1 870 aa4.3□□□□□ -1.72
CDKL5-208ENST00000624953 DNAJC5GQ8N7S2 189 aa4.3□□□□□ -1.72
CDKL5-208ENST00000624953 PTPN18Q99952 460 aa4.3□□□□□ -1.72
CDKL5-208ENST00000624953 FAM126AQ9BYI3 521 aaPredicted RBP4.3□□□□□ -1.72
CDKL5-208ENST00000624953 WNT8AQ9H1J5 351 aa4.3□□□□□ -1.72
CDKL5-208ENST00000624953 PCIF1Q9H4Z3 704 aa4.3□□□□□ -1.72
CDKL5-208ENST00000624953 STK32BQ9NY57 414 aa4.3□□□□□ -1.72
CDKL5-208ENST00000624953 SLC30A1Q9Y6M5 507 aa4.3□□□□□ -1.72
CDKL5-208ENST00000624953 CD163L1Q9NR16 1453 aa4.3□□□□□ -1.72
CDKL5-208ENST00000624953 ADAMTS7Q9UKP4 1686 aa4.29□□□□□ -1.72
CDKL5-208ENST00000624953 C1QTNF3-AMACRE9PGA6 284 aa4.29□□□□□ -1.72
CDKL5-208ENST00000624953 ARHGAP6O43182 974 aa4.29□□□□□ -1.72
CDKL5-208ENST00000624953 OPHN1O60890 802 aa4.29□□□□□ -1.72
CDKL5-208ENST00000624953 PRPF6O94906 941 aaKnown RBP4.29□□□□□ -1.72
CDKL5-208ENST00000624953 CELA3BP08861 270 aa4.29□□□□□ -1.72
CDKL5-208ENST00000624953 HSPA6P17066 643 aa4.29□□□□□ -1.72
CDKL5-208ENST00000624953 SCNN1BP51168 640 aa4.29□□□□□ -1.72
CDKL5-208ENST00000624953 KPNA1P52294 538 aaPredicted RBP4.29□□□□□ -1.72
CDKL5-208ENST00000624953 GPR162Q16538 588 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms