RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 DGAT1O75907 488 aa8.96□□□□□ -0.97
SND1-IT1-201ENST00000623342 MTA2O94776 668 aa8.96□□□□□ -0.97
SND1-IT1-201ENST00000623342 HMGCS2P54868 508 aa8.96□□□□□ -0.97
SND1-IT1-201ENST00000623342 RTP1P59025 263 aa8.96□□□□□ -0.97
SND1-IT1-201ENST00000623342 PTENP60484 403 aa8.96□□□□□ -0.97
SND1-IT1-201ENST00000623342 POU5F1Q01860 360 aaKnown RBP8.96□□□□□ -0.97
SND1-IT1-201ENST00000623342 SWSAP1Q6NVH7 229 aa8.96□□□□□ -0.97
SND1-IT1-201ENST00000623342 SLC39A4Q6P5W5 647 aa8.96□□□□□ -0.97
SND1-IT1-201ENST00000623342 LRIG3Q6UXM1 1119 aa8.96□□□□□ -0.97
SND1-IT1-201ENST00000623342 UBL4BQ8N7F7 174 aa8.96□□□□□ -0.97
SND1-IT1-201ENST00000623342 FBXL13Q8NEE6 735 aa8.96□□□□□ -0.97
SND1-IT1-201ENST00000623342 POMGNT1Q8WZA1 660 aa8.96□□□□□ -0.97
SND1-IT1-201ENST00000623342 NT5C1BQ96P26 610 aa8.96□□□□□ -0.97
SND1-IT1-201ENST00000623342 POP1Q99575 1024 aaKnown RBP8.96□□□□□ -0.97
SND1-IT1-201ENST00000623342 JPH1Q9HDC5 661 aaPredicted RBP8.96□□□□□ -0.97
SND1-IT1-201ENST00000623342 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.96□□□□□ -0.97
SND1-IT1-201ENST00000623342 FAM114A2Q9NRY5 505 aa8.96□□□□□ -0.97
SND1-IT1-201ENST00000623342 PLAAQ9Y263 795 aa8.96□□□□□ -0.97
SND1-IT1-201ENST00000623342 COL11A1P12107 1806 aaPredicted RBP8.96□□□□□ -0.97
SND1-IT1-201ENST00000623342 RLFQ13129 1914 aa8.96□□□□□ -0.98
SND1-IT1-201ENST00000623342 ATP2A1O14983 1001 aa8.96□□□□□ -0.98
SND1-IT1-201ENST00000623342 DAPK3O43293 454 aa8.96□□□□□ -0.98
SND1-IT1-201ENST00000623342 STAM2O75886 525 aa8.96□□□□□ -0.98
SND1-IT1-201ENST00000623342 RGS20O76081 388 aa8.96□□□□□ -0.98
SND1-IT1-201ENST00000623342 HSD17B3P37058 310 aa8.96□□□□□ -0.98
SND1-IT1-201ENST00000623342 SOX10P56693 466 aa8.96□□□□□ -0.98
SND1-IT1-201ENST00000623342 ENPEPQ07075 957 aa8.96□□□□□ -0.98
SND1-IT1-201ENST00000623342 CYP24A1Q07973 514 aa8.96□□□□□ -0.98
SND1-IT1-201ENST00000623342 TMEM132BQ14DG7 1078 aa8.96□□□□□ -0.98
SND1-IT1-201ENST00000623342 NAA35Q5VZE5 725 aa8.96□□□□□ -0.98
SND1-IT1-201ENST00000623342 KCTD16Q68DU8 428 aa8.96□□□□□ -0.98
SND1-IT1-201ENST00000623342 FOXR1Q6PIV2 292 aa8.96□□□□□ -0.98
SND1-IT1-201ENST00000623342 SLC47A2Q86VL8 602 aa8.96□□□□□ -0.98
SND1-IT1-201ENST00000623342 GPD1LQ8N335 351 aa8.96□□□□□ -0.98
SND1-IT1-201ENST00000623342 HELQQ8TDG4 1101 aa8.96□□□□□ -0.98
SND1-IT1-201ENST00000623342 MORC4Q8TE76 937 aa8.96□□□□□ -0.98
SND1-IT1-201ENST00000623342 ALG3Q92685 438 aa8.96□□□□□ -0.98
SND1-IT1-201ENST00000623342 RPS6KC1Q96S38 1066 aa8.96□□□□□ -0.98
SND1-IT1-201ENST00000623342 SGIP1Q9BQI5 828 aa8.96□□□□□ -0.98
SND1-IT1-201ENST00000623342 CELF4Q9BZC1 486 aaKnown RBP8.96□□□□□ -0.98
SND1-IT1-201ENST00000623342 RAB17Q9H0T7 212 aa8.96□□□□□ -0.98
SND1-IT1-201ENST00000623342 NEUROG2Q9H2A3 272 aa8.96□□□□□ -0.98
SND1-IT1-201ENST00000623342 PDLIM7Q9NR12 457 aa8.96□□□□□ -0.98
SND1-IT1-201ENST00000623342 RAB20Q9NX57 234 aa8.96□□□□□ -0.98
SND1-IT1-201ENST00000623342 SLC9A2Q9UBY0 812 aa8.96□□□□□ -0.98
SND1-IT1-201ENST00000623342 SEPT9Q9UHD8 586 aaPredicted RBP8.96□□□□□ -0.98
SND1-IT1-201ENST00000623342 SYNGAP1Q96PV0 1343 aa8.96□□□□□ -0.98
SND1-IT1-201ENST00000623342 ARID2Q68CP9 1835 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 H0YCG3 227 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 HNRNPDLO14979 420 aaKnown RBP8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 MMEP08473 750 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 CYP11B1P15538 503 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 GARTP22102 1010 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 ABCD1P33897 745 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 PDE6CP51160 858 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 ACTR2P61160 394 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 GNGT1P63211 74 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 FMO1Q01740 532 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 PRKCEQ02156 737 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 ZNF211Q13398 564 aaPredicted RBP8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 MTMR3Q13615 1198 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 GNPTABQ3T906 1256 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 BRDTQ58F21 947 aaPredicted RBP8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 APOBEC3FQ8IUX4 373 aaKnown RBP8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 SH2D3CQ8N5H7 860 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 TAS1R2Q8TE23 839 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 IFT74Q96LB3 600 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 ATP6V1G3Q96LB4 118 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 ZSWIM1Q9BR11 485 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 TEX13BQ9BXU2 312 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 MAF1Q9H063 256 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 ACAD9Q9H845 621 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 ATP6V0A4Q9HBG4 840 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 CYP26B1Q9NR63 512 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 TOPORSQ9NS56 1045 aaPredicted RBP8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 CYP39A1Q9NYL5 469 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 TMOD4Q9NZQ9 345 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 NR2E1Q9Y466 385 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 ADGRA3Q8IWK6 1321 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 GOLGA6L10A6NI86 522 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 TMEM110-MUSTN1A8MSY1 372 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 HMGB1P1B2RPK0 211 aaPredicted RBP8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 SPATA31C2B4DYI2 1134 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 FZD9O00144 591 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 EIF3HO15372 352 aaKnown RBP eCLIP8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 CYP1A2P05177 515 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 HSPA6P17066 643 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 DR1Q01658 176 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 CDR2Q01850 454 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 SP4Q02446 784 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 DHX34Q14147 1143 aaKnown RBP8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 DNAJC21Q5F1R6 531 aaKnown RBP8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 CEP85LQ5SZL2 805 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 EMC10Q5UCC4 262 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 ANGEL2Q5VTE6 544 aaKnown RBP8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 MIS18BP1Q6P0N0 1132 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 ABHD15Q6UXT9 468 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 KDM7AQ6ZMT4 941 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 CATSPERGQ6ZRH7 1159 aa8.95□□□□□ -0.98
SND1-IT1-201ENST00000623342 SV2AQ7L0J3 742 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms