RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 ATP8B1O43520 1251 aa17.67■□□□□ 0.42
LDB3-208ENST00000623007 TMOD1P28289 359 aa17.67■□□□□ 0.42
LDB3-208ENST00000623007 PAFAH1B1P43034 410 aa17.67■□□□□ 0.42
LDB3-208ENST00000623007 SOX10P56693 466 aa17.67■□□□□ 0.42
LDB3-208ENST00000623007 APBA1Q02410 837 aa17.67■□□□□ 0.42
LDB3-208ENST00000623007 CAPSQ13938 189 aa17.67■□□□□ 0.42
LDB3-208ENST00000623007 KYAT1Q16773 422 aa17.67■□□□□ 0.42
LDB3-208ENST00000623007 WDR44Q5JSH3 913 aa17.67■□□□□ 0.42
LDB3-208ENST00000623007 IQSEC1Q6DN90 963 aa17.67■□□□□ 0.42
LDB3-208ENST00000623007 GPR142Q7Z601 462 aa17.67■□□□□ 0.42
LDB3-208ENST00000623007 SLC30A5Q8TAD4 765 aa17.67■□□□□ 0.42
LDB3-208ENST00000623007 PRPF31Q8WWY3 499 aaKnown RBP17.67■□□□□ 0.42
LDB3-208ENST00000623007 CCDC127Q96BQ5 260 aa17.67■□□□□ 0.42
LDB3-208ENST00000623007 FAM213AQ9BRX8 229 aa17.67■□□□□ 0.42
LDB3-208ENST00000623007 MSTO1Q9BUK6 570 aa17.67■□□□□ 0.42
LDB3-208ENST00000623007 RRAGCQ9HB90 399 aa17.67■□□□□ 0.42
LDB3-208ENST00000623007 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.67■□□□□ 0.42
LDB3-208ENST00000623007 TELO2Q9Y4R8 837 aa17.67■□□□□ 0.42
LDB3-208ENST00000623007 GOLGA8IPA6NC78 632 aa17.67■□□□□ 0.42
LDB3-208ENST00000623007 GOLGA8JA6NMD2 632 aa17.67■□□□□ 0.42
LDB3-208ENST00000623007 CLDN3O15551 220 aa17.67■□□□□ 0.42
LDB3-208ENST00000623007 ATP1A1P05023 1023 aaKnown RBP17.67■□□□□ 0.42
LDB3-208ENST00000623007 TMEM253P0C7T8 217 aa17.67■□□□□ 0.42
LDB3-208ENST00000623007 GZMAP12544 262 aa17.67■□□□□ 0.42
LDB3-208ENST00000623007 H2AFXP16104 143 aaPredicted RBP17.67■□□□□ 0.42
LDB3-208ENST00000623007 BPIFB4P59827 614 aa17.67■□□□□ 0.42
LDB3-208ENST00000623007 RBM10P98175 930 aaKnown RBP17.67■□□□□ 0.42
LDB3-208ENST00000623007 CDC42EP1Q00587 391 aa17.67■□□□□ 0.42
LDB3-208ENST00000623007 ARHGAP1Q07960 439 aa17.67■□□□□ 0.42
LDB3-208ENST00000623007 LAMTOR4Q0VGL1 99 aa17.67■□□□□ 0.42
LDB3-208ENST00000623007 TAPT1Q6NXT6 567 aa17.67■□□□□ 0.42
LDB3-208ENST00000623007 ZNF572Q7Z3I7 529 aaPredicted RBP17.67■□□□□ 0.42
LDB3-208ENST00000623007 C1orf112Q9NSG2 853 aa17.67■□□□□ 0.42
LDB3-208ENST00000623007 DUSP10Q9Y6W6 482 aa17.67■□□□□ 0.42
LDB3-208ENST00000623007 MOCS3O95396 460 aa17.66■□□□□ 0.42
LDB3-208ENST00000623007 POTEJP0CG39 1038 aa17.66■□□□□ 0.42
LDB3-208ENST00000623007 MATR3P43243 847 aaKnown RBP eCLIP17.66■□□□□ 0.42
LDB3-208ENST00000623007 MAP2K1Q02750 393 aaPredicted RBP17.66■□□□□ 0.42
LDB3-208ENST00000623007 BRD3Q15059 726 aa17.66■□□□□ 0.42
LDB3-208ENST00000623007 TEX35Q5T0J7 233 aa17.66■□□□□ 0.42
LDB3-208ENST00000623007 C15orf39Q6ZRI6 1047 aa17.66■□□□□ 0.42
LDB3-208ENST00000623007 SV2AQ7L0J3 742 aa17.66■□□□□ 0.42
LDB3-208ENST00000623007 RHOT2Q8IXI1 618 aa17.66■□□□□ 0.42
LDB3-208ENST00000623007 FAM71AQ8IYT1 594 aa17.66■□□□□ 0.42
LDB3-208ENST00000623007 CTNNBL1Q8WYA6 563 aaPredicted RBP17.66■□□□□ 0.42
LDB3-208ENST00000623007 SHC3Q92529 594 aa17.66■□□□□ 0.42
LDB3-208ENST00000623007 GPR88Q9GZN0 384 aa17.66■□□□□ 0.42
LDB3-208ENST00000623007 CAPN6Q9Y6Q1 641 aa17.66■□□□□ 0.42
LDB3-208ENST00000623007 ANKRD62A6NC57 917 aa17.65■□□□□ 0.42
LDB3-208ENST00000623007 ERLIN1O75477 346 aa17.65■□□□□ 0.42
LDB3-208ENST00000623007 TCEAL1Q15170 157 aa17.65■□□□□ 0.42
LDB3-208ENST00000623007 CLUL1Q15846 466 aa17.65■□□□□ 0.42
LDB3-208ENST00000623007 ENOX2Q16206 610 aaKnown RBP17.65■□□□□ 0.42
LDB3-208ENST00000623007 ARHGAP44Q17R89 818 aa17.65■□□□□ 0.42
LDB3-208ENST00000623007 ZACNQ401N2 412 aa17.65■□□□□ 0.42
LDB3-208ENST00000623007 DUSP28Q4G0W2 176 aa17.65■□□□□ 0.42
LDB3-208ENST00000623007 ZNF677Q86XU0 584 aa17.65■□□□□ 0.42
LDB3-208ENST00000623007 PPM1KQ8N3J5 372 aa17.65■□□□□ 0.42
LDB3-208ENST00000623007 MSANTD4Q8NCY6 345 aa17.65■□□□□ 0.42
LDB3-208ENST00000623007 CAGE1Q8TC20 777 aa17.65■□□□□ 0.42
LDB3-208ENST00000623007 TSC1Q92574 1164 aa17.65■□□□□ 0.42
LDB3-208ENST00000623007 CGRRF1Q99675 332 aa17.65■□□□□ 0.42
LDB3-208ENST00000623007 AGPAT1Q99943 283 aa17.65■□□□□ 0.42
LDB3-208ENST00000623007 SYT11Q9BT88 431 aa17.65■□□□□ 0.42
LDB3-208ENST00000623007 CCDC113Q9H0I3 377 aa17.65■□□□□ 0.42
LDB3-208ENST00000623007 RBAKQ9NYW8 714 aaPredicted RBP17.65■□□□□ 0.42
LDB3-208ENST00000623007 SUCLA2Q9P2R7 463 aaPredicted RBP17.65■□□□□ 0.42
LDB3-208ENST00000623007 TRPM7Q96QT4 1865 aa17.65■□□□□ 0.42
LDB3-208ENST00000623007 ADGRA2Q96PE1 1338 aa17.65■□□□□ 0.42
LDB3-208ENST00000623007 GRID2IPA4D2P6 1211 aa17.64■□□□□ 0.42
LDB3-208ENST00000623007 CCDC151A5D8V7 595 aa17.64■□□□□ 0.42
LDB3-208ENST00000623007 DCAF8L1A6NGE4 600 aa17.64■□□□□ 0.42
LDB3-208ENST00000623007 DDX3XO00571 662 aaKnown RBP eCLIP17.64■□□□□ 0.42
LDB3-208ENST00000623007 LGALS2P05162 132 aa17.64■□□□□ 0.42
LDB3-208ENST00000623007 TNNI1P19237 187 aa17.64■□□□□ 0.42
LDB3-208ENST00000623007 TBXAS1P24557 533 aaPredicted RBP17.64■□□□□ 0.42
LDB3-208ENST00000623007 KLRC1P26715 233 aa17.64■□□□□ 0.42
LDB3-208ENST00000623007 PHKA2P46019 1235 aa17.64■□□□□ 0.42
LDB3-208ENST00000623007 GJB7Q6PEY0 223 aa17.64■□□□□ 0.42
LDB3-208ENST00000623007 IFNLR1Q8IU57 520 aaPredicted RBP17.64■□□□□ 0.42
LDB3-208ENST00000623007 PLEKHO2Q8TD55 490 aa17.64■□□□□ 0.42
LDB3-208ENST00000623007 RFFLQ8WZ73 363 aa17.64■□□□□ 0.42
LDB3-208ENST00000623007 MAML3Q96JK9 1138 aa17.64■□□□□ 0.42
LDB3-208ENST00000623007 TINF2Q9BSI4 451 aa17.64■□□□□ 0.42
LDB3-208ENST00000623007 IMPG2Q9BZV3 1241 aa17.64■□□□□ 0.42
LDB3-208ENST00000623007 SUGCTQ9HAC7 445 aa17.64■□□□□ 0.42
LDB3-208ENST00000623007 PRMT7Q9NVM4 692 aaPredicted RBP17.64■□□□□ 0.42
LDB3-208ENST00000623007 ZBTB42B2RXF5 422 aa17.64■□□□□ 0.41
LDB3-208ENST00000623007 FOXN3O00409 490 aaPredicted RBP17.64■□□□□ 0.41
LDB3-208ENST00000623007 ACKR2O00590 384 aa17.64■□□□□ 0.41
LDB3-208ENST00000623007 ENC1O14682 589 aa17.64■□□□□ 0.41
LDB3-208ENST00000623007 MSCO60682 206 aa17.64■□□□□ 0.41
LDB3-208ENST00000623007 PRKCBP05771 671 aa17.64■□□□□ 0.41
LDB3-208ENST00000623007 DLATP10515 647 aaKnown RBP17.64■□□□□ 0.41
LDB3-208ENST00000623007 HOXD8P13378 290 aaPredicted RBP17.64■□□□□ 0.41
LDB3-208ENST00000623007 MARK3P27448 753 aa17.64■□□□□ 0.41
LDB3-208ENST00000623007 PDE6CP51160 858 aa17.64■□□□□ 0.41
LDB3-208ENST00000623007 HADHBP55084 474 aaKnown RBP17.64■□□□□ 0.41
LDB3-208ENST00000623007 FAM187BQ17R55 369 aa17.64■□□□□ 0.41
LDB3-208ENST00000623007 CFAP221Q4G0U5 840 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms