RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 RPS6KA5O75582 802 aa19.42■□□□□ 0.7
PTCHD3-202ENST00000622555 ADCY5O95622 1261 aa19.42■□□□□ 0.7
PTCHD3-202ENST00000622555 MARSP56192 900 aaKnown RBP19.42■□□□□ 0.7
PTCHD3-202ENST00000622555 MCL1Q07820 350 aa19.42■□□□□ 0.7
PTCHD3-202ENST00000622555 SNRNP35Q16560 246 aaKnown RBP19.42■□□□□ 0.7
PTCHD3-202ENST00000622555 FAM228AQ86W67 206 aa19.42■□□□□ 0.7
PTCHD3-202ENST00000622555 FAM213AQ9BRX8 229 aa19.42■□□□□ 0.7
PTCHD3-202ENST00000622555 XPO4Q9C0E2 1151 aaKnown RBP19.42■□□□□ 0.7
PTCHD3-202ENST00000622555 LRRC10BA6NIK2 292 aa19.42■□□□□ 0.7
PTCHD3-202ENST00000622555 PES1O00541 588 aaKnown RBP19.42■□□□□ 0.7
PTCHD3-202ENST00000622555 N4BP3O15049 544 aa19.42■□□□□ 0.7
PTCHD3-202ENST00000622555 CBFA2T2O43439 604 aa19.42■□□□□ 0.7
PTCHD3-202ENST00000622555 EXTL3O43909 919 aa19.42■□□□□ 0.7
PTCHD3-202ENST00000622555 ZNF75DP51815 510 aa19.42■□□□□ 0.7
PTCHD3-202ENST00000622555 TLE2Q04725 743 aa19.42■□□□□ 0.7
PTCHD3-202ENST00000622555 BFSP2Q13515 415 aa19.42■□□□□ 0.7
PTCHD3-202ENST00000622555 FILIP1LQ4L180 1135 aa19.42■□□□□ 0.7
PTCHD3-202ENST00000622555 C1orf53Q5VUE5 145 aa19.42■□□□□ 0.7
PTCHD3-202ENST00000622555 NECAB2Q7Z6G3 386 aa19.42■□□□□ 0.7
PTCHD3-202ENST00000622555 CBWD2Q8IUF1 395 aa19.42■□□□□ 0.7
PTCHD3-202ENST00000622555 NAP1L5Q96NT1 182 aaPredicted RBP19.42■□□□□ 0.7
PTCHD3-202ENST00000622555 NOC4LQ9BVI4 516 aaKnown RBP19.42■□□□□ 0.7
PTCHD3-202ENST00000622555 CDT1Q9H211 546 aa19.42■□□□□ 0.7
PTCHD3-202ENST00000622555 KIAA1586Q9HCI6 787 aa19.42■□□□□ 0.7
PTCHD3-202ENST00000622555 AGPAT5Q9NUQ2 364 aa19.42■□□□□ 0.7
PTCHD3-202ENST00000622555 PIN4Q9Y237 131 aaKnown RBP19.42■□□□□ 0.7
PTCHD3-202ENST00000622555 A0A1B0GUA9 196 aa19.41■□□□□ 0.7
PTCHD3-202ENST00000622555 MAPK13O15264 365 aa19.41■□□□□ 0.7
PTCHD3-202ENST00000622555 LDHAP00338 332 aaKnown RBP19.41■□□□□ 0.7
PTCHD3-202ENST00000622555 ADRB2P07550 413 aa19.41■□□□□ 0.7
PTCHD3-202ENST00000622555 AXLP30530 894 aa19.41■□□□□ 0.7
PTCHD3-202ENST00000622555 HOXA11P31270 313 aaPredicted RBP19.41■□□□□ 0.7
PTCHD3-202ENST00000622555 RBL2Q08999 1139 aa19.41■□□□□ 0.7
PTCHD3-202ENST00000622555 HSP90AA2PQ14568 343 aaPredicted RBP19.41■□□□□ 0.7
PTCHD3-202ENST00000622555 MAN2A1Q16706 1144 aa19.41■□□□□ 0.7
PTCHD3-202ENST00000622555 FBXO47Q5MNV8 452 aa19.41■□□□□ 0.7
PTCHD3-202ENST00000622555 NOTUMQ6P988 496 aa19.41■□□□□ 0.7
PTCHD3-202ENST00000622555 TRIM59Q8IWR1 403 aa19.41■□□□□ 0.7
PTCHD3-202ENST00000622555 FBXL18Q96ME1 805 aa19.41■□□□□ 0.7
PTCHD3-202ENST00000622555 TOX2Q96NM4 488 aa19.41■□□□□ 0.7
PTCHD3-202ENST00000622555 ADPGKQ9BRR6 497 aa19.41■□□□□ 0.7
PTCHD3-202ENST00000622555 RRAGDQ9NQL2 400 aaPredicted RBP19.41■□□□□ 0.7
PTCHD3-202ENST00000622555 ATP11BQ9Y2G3 1177 aa19.41■□□□□ 0.7
PTCHD3-202ENST00000622555 A0A1B0GTH6 734 aa19.4■□□□□ 0.7
PTCHD3-202ENST00000622555 TULP1O00294 542 aaPredicted RBP19.4■□□□□ 0.7
PTCHD3-202ENST00000622555 OGTO15294 1046 aa19.4■□□□□ 0.7
PTCHD3-202ENST00000622555 TPM3P06753 285 aa19.4■□□□□ 0.7
PTCHD3-202ENST00000622555 MCF2P10911 925 aa19.4■□□□□ 0.7
PTCHD3-202ENST00000622555 GHRP10912 638 aa19.4■□□□□ 0.7
PTCHD3-202ENST00000622555 KRT13P13646 458 aa19.4■□□□□ 0.7
PTCHD3-202ENST00000622555 ACOT2P49753 483 aa19.4■□□□□ 0.7
PTCHD3-202ENST00000622555 NFX1Q12986 1120 aaKnown RBP19.4■□□□□ 0.7
PTCHD3-202ENST00000622555 DCAF17Q5H9S7 520 aaPredicted RBP19.4■□□□□ 0.7
PTCHD3-202ENST00000622555 TRIM44Q96DX7 344 aaPredicted RBP19.4■□□□□ 0.7
PTCHD3-202ENST00000622555 BORCS6Q96GS4 357 aa19.4■□□□□ 0.7
PTCHD3-202ENST00000622555 ST3GAL5Q9UNP4 418 aa19.4■□□□□ 0.7
PTCHD3-202ENST00000622555 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.4■□□□□ 0.7
PTCHD3-202ENST00000622555 ZNF233A6NK53 670 aa19.39■□□□□ 0.7
PTCHD3-202ENST00000622555 RBAK-RBAKDNI3L0D1 243 aa19.39■□□□□ 0.7
PTCHD3-202ENST00000622555 SELPP16109 830 aa19.39■□□□□ 0.7
PTCHD3-202ENST00000622555 PAK2Q13177 524 aa19.39■□□□□ 0.7
PTCHD3-202ENST00000622555 LPIN1Q14693 890 aa19.39■□□□□ 0.7
PTCHD3-202ENST00000622555 SEZ6Q53EL9 994 aa19.39■□□□□ 0.7
PTCHD3-202ENST00000622555 ZBTB41Q5SVQ8 909 aa19.39■□□□□ 0.7
PTCHD3-202ENST00000622555 TCERG1LQ5VWI1 586 aa19.39■□□□□ 0.7
PTCHD3-202ENST00000622555 TRAF7Q6Q0C0 670 aa19.39■□□□□ 0.7
PTCHD3-202ENST00000622555 INTS8Q75QN2 995 aaKnown RBP19.39■□□□□ 0.7
PTCHD3-202ENST00000622555 LRRC8DQ7L1W4 858 aa19.39■□□□□ 0.7
PTCHD3-202ENST00000622555 APBB1IPQ7Z5R6 666 aaPredicted RBP19.39■□□□□ 0.7
PTCHD3-202ENST00000622555 THNSL1Q8IYQ7 743 aa19.39■□□□□ 0.7
PTCHD3-202ENST00000622555 OSBPL7Q9BZF2 842 aa19.39■□□□□ 0.7
PTCHD3-202ENST00000622555 AGO3Q9H9G7 860 aaKnown RBP19.39■□□□□ 0.7
PTCHD3-202ENST00000622555 GPR182O15218 404 aa19.39■□□□□ 0.69
PTCHD3-202ENST00000622555 EN2P19622 333 aaPredicted RBP19.39■□□□□ 0.69
PTCHD3-202ENST00000622555 CD52P31358 61 aa19.39■□□□□ 0.69
PTCHD3-202ENST00000622555 FAAP100Q0VG06 881 aa19.39■□□□□ 0.69
PTCHD3-202ENST00000622555 BFSP1Q12934 665 aa19.39■□□□□ 0.69
PTCHD3-202ENST00000622555 LRRC26Q2I0M4 334 aa19.39■□□□□ 0.69
PTCHD3-202ENST00000622555 DCAF4L1Q3SXM0 396 aa19.39■□□□□ 0.69
PTCHD3-202ENST00000622555 VWA3BQ502W6 1294 aa19.39■□□□□ 0.69
PTCHD3-202ENST00000622555 MIIPQ5JXC2 388 aa19.39■□□□□ 0.69
PTCHD3-202ENST00000622555 SLC27A1Q6PCB7 646 aa19.39■□□□□ 0.69
PTCHD3-202ENST00000622555 CRELD2Q6UXH1 353 aaPredicted RBP19.39■□□□□ 0.69
PTCHD3-202ENST00000622555 RTN4Q9NQC3 1192 aaKnown RBP19.39■□□□□ 0.69
PTCHD3-202ENST00000622555 LGALS16A8MUM7 142 aa19.38■□□□□ 0.69
PTCHD3-202ENST00000622555 FAM189A1O60320 539 aa19.38■□□□□ 0.69
PTCHD3-202ENST00000622555 NPTXRO95502 500 aa19.38■□□□□ 0.69
PTCHD3-202ENST00000622555 VAMP7P51809 220 aa19.38■□□□□ 0.69
PTCHD3-202ENST00000622555 PPP2R3AQ06190 1150 aa19.38■□□□□ 0.69
PTCHD3-202ENST00000622555 CYP24A1Q07973 514 aa19.38■□□□□ 0.69
PTCHD3-202ENST00000622555 USP38Q8NB14 1042 aa19.38■□□□□ 0.69
PTCHD3-202ENST00000622555 MRFAP1L1Q96HT8 127 aa19.38■□□□□ 0.69
PTCHD3-202ENST00000622555 MFSD14AQ96MC6 490 aa19.38■□□□□ 0.69
PTCHD3-202ENST00000622555 NDST4Q9H3R1 872 aa19.38■□□□□ 0.69
PTCHD3-202ENST00000622555 ERVK-5Q9HDB9 667 aa19.38■□□□□ 0.69
PTCHD3-202ENST00000622555 INTS13Q9NVM9 706 aa19.38■□□□□ 0.69
PTCHD3-202ENST00000622555 PADI3Q9ULW8 664 aa19.38■□□□□ 0.69
PTCHD3-202ENST00000622555 SQORQ9Y6N5 450 aa19.38■□□□□ 0.69
PTCHD3-202ENST00000622555 TANC1Q9C0D5 1861 aa19.38■□□□□ 0.69
PTCHD3-202ENST00000622555 CITO14578 2027 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms