RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 FAM47EQ6ZV65 393 aa16.92■□□□□ 0.3
NPHP4-211ENST00000622020 SLC13A5Q86YT5 568 aaPredicted RBP16.92■□□□□ 0.3
NPHP4-211ENST00000622020 NSMCE1Q8WV22 266 aa16.92■□□□□ 0.3
NPHP4-211ENST00000622020 CENPTQ96BT3 561 aa16.92■□□□□ 0.3
NPHP4-211ENST00000622020 UNC45AQ9H3U1 944 aa16.92■□□□□ 0.3
NPHP4-211ENST00000622020 CHST7Q9NS84 486 aa16.92■□□□□ 0.3
NPHP4-211ENST00000622020 NHSQ6T4R5 1651 aa16.92■□□□□ 0.3
NPHP4-211ENST00000622020 IGF2BP3O00425 579 aaKnown RBP eCLIP16.92■□□□□ 0.3
NPHP4-211ENST00000622020 EIF3DO15371 548 aaKnown RBP eCLIP16.92■□□□□ 0.3
NPHP4-211ENST00000622020 VAMP7P51809 220 aa16.92■□□□□ 0.3
NPHP4-211ENST00000622020 KRT17Q04695 432 aa16.92■□□□□ 0.3
NPHP4-211ENST00000622020 MOXD1Q6UVY6 613 aa16.92■□□□□ 0.3
NPHP4-211ENST00000622020 CAPN12Q6ZSI9 719 aa16.92■□□□□ 0.3
NPHP4-211ENST00000622020 PLEKHO2Q8TD55 490 aa16.92■□□□□ 0.3
NPHP4-211ENST00000622020 AGAP11Q8TF27 550 aa16.92■□□□□ 0.3
NPHP4-211ENST00000622020 SAAL1Q96ER3 474 aa16.92■□□□□ 0.3
NPHP4-211ENST00000622020 CRAMP1Q96RY5 1269 aa16.92■□□□□ 0.3
NPHP4-211ENST00000622020 COA1Q9GZY4 146 aa16.92■□□□□ 0.3
NPHP4-211ENST00000622020 GPRC5CQ9NQ84 441 aa16.92■□□□□ 0.3
NPHP4-211ENST00000622020 DIS3Q9Y2L1 958 aaKnown RBP16.92■□□□□ 0.3
NPHP4-211ENST00000622020 ASAP2O43150 1006 aa16.91■□□□□ 0.3
NPHP4-211ENST00000622020 SNX3O60493 162 aa16.91■□□□□ 0.3
NPHP4-211ENST00000622020 FOSP01100 380 aaPredicted RBP16.91■□□□□ 0.3
NPHP4-211ENST00000622020 PAX7P23759 505 aa16.91■□□□□ 0.3
NPHP4-211ENST00000622020 MPP2Q14168 576 aa16.91■□□□□ 0.3
NPHP4-211ENST00000622020 RRP1BQ14684 758 aaKnown RBP16.91■□□□□ 0.3
NPHP4-211ENST00000622020 KIF22Q14807 665 aa16.91■□□□□ 0.3
NPHP4-211ENST00000622020 PI4KBQ9UBF8 816 aa16.91■□□□□ 0.3
NPHP4-211ENST00000622020 FAM198AQ9UFP1 575 aa16.91■□□□□ 0.3
NPHP4-211ENST00000622020 MTUS1Q9ULD2 1270 aa16.91■□□□□ 0.3
NPHP4-211ENST00000622020 SLC12A4Q9UP95 1085 aa16.91■□□□□ 0.3
NPHP4-211ENST00000622020 PCDHA3Q9Y5H8 950 aa16.91■□□□□ 0.3
NPHP4-211ENST00000622020 PODXLO00592 558 aa16.91■□□□□ 0.3
NPHP4-211ENST00000622020 ECEL1O95672 775 aa16.91■□□□□ 0.3
NPHP4-211ENST00000622020 ALDH5A1P51649 535 aaPredicted RBP16.91■□□□□ 0.3
NPHP4-211ENST00000622020 SGO2Q562F6 1265 aa16.91■□□□□ 0.3
NPHP4-211ENST00000622020 CYP4X1Q8N118 509 aa16.91■□□□□ 0.3
NPHP4-211ENST00000622020 DAW1Q8N136 415 aa16.91■□□□□ 0.3
NPHP4-211ENST00000622020 TAOK3Q9H2K8 898 aa16.91■□□□□ 0.3
NPHP4-211ENST00000622020 TDRD3Q9H7E2 651 aaKnown RBP16.91■□□□□ 0.3
NPHP4-211ENST00000622020 PSMD10O75832 226 aa16.91■□□□□ 0.3
NPHP4-211ENST00000622020 CYP3A4P08684 503 aa16.91■□□□□ 0.3
NPHP4-211ENST00000622020 GHRP10912 638 aa16.91■□□□□ 0.3
NPHP4-211ENST00000622020 RARGP13631 454 aa16.91■□□□□ 0.3
NPHP4-211ENST00000622020 CTNNA2P26232 953 aa16.91■□□□□ 0.3
NPHP4-211ENST00000622020 TAOK1Q7L7X3 1001 aa16.91■□□□□ 0.3
NPHP4-211ENST00000622020 COL23A1Q86Y22 540 aaPredicted RBP16.91■□□□□ 0.3
NPHP4-211ENST00000622020 CCDC50Q8IVM0 306 aa16.91■□□□□ 0.3
NPHP4-211ENST00000622020 SRRM1Q8IYB3 904 aaKnown RBP16.91■□□□□ 0.3
NPHP4-211ENST00000622020 KLHL29Q96CT2 875 aa16.91■□□□□ 0.3
NPHP4-211ENST00000622020 KIFC3Q9BVG8 833 aa16.91■□□□□ 0.3
NPHP4-211ENST00000622020 TOPORSQ9NS56 1045 aaPredicted RBP16.91■□□□□ 0.3
NPHP4-211ENST00000622020 NYAP2Q9P242 653 aa16.91■□□□□ 0.3
NPHP4-211ENST00000622020 PASKQ96RG2 1323 aa16.9■□□□□ 0.3
NPHP4-211ENST00000622020 ANP32DO95626 131 aa16.9■□□□□ 0.3
NPHP4-211ENST00000622020 CHRNB2P17787 502 aa16.9■□□□□ 0.3
NPHP4-211ENST00000622020 SLC8A1P32418 973 aa16.9■□□□□ 0.3
NPHP4-211ENST00000622020 PPP2R5EQ16537 467 aa16.9■□□□□ 0.3
NPHP4-211ENST00000622020 ACER1Q8TDN7 264 aa16.9■□□□□ 0.3
NPHP4-211ENST00000622020 EPS8L1Q8TE68 723 aa16.9■□□□□ 0.3
NPHP4-211ENST00000622020 C9orf72Q96LT7 481 aa16.9■□□□□ 0.3
NPHP4-211ENST00000622020 DMAC2Q9NW81 257 aa16.9■□□□□ 0.3
NPHP4-211ENST00000622020 PCYOX1Q9UHG3 505 aa16.9■□□□□ 0.3
NPHP4-211ENST00000622020 MIF4GDA9UHW6 222 aaKnown RBP16.9■□□□□ 0.3
NPHP4-211ENST00000622020 BRAFP15056 766 aa16.9■□□□□ 0.3
NPHP4-211ENST00000622020 PRELPP51888 382 aa16.9■□□□□ 0.3
NPHP4-211ENST00000622020 PADI6Q6TGC4 694 aa16.9■□□□□ 0.3
NPHP4-211ENST00000622020 KCNV2Q8TDN2 545 aa16.9■□□□□ 0.3
NPHP4-211ENST00000622020 HERPUD2Q9BSE4 406 aa16.9■□□□□ 0.3
NPHP4-211ENST00000622020 PI4K2AQ9BTU6 479 aa16.9■□□□□ 0.3
NPHP4-211ENST00000622020 KRT16P08779 473 aa16.89■□□□□ 0.29
NPHP4-211ENST00000622020 CIITAP33076 1130 aa16.89■□□□□ 0.29
NPHP4-211ENST00000622020 SSR1P43307 286 aaKnown RBP16.89■□□□□ 0.29
NPHP4-211ENST00000622020 PDE6CP51160 858 aa16.89■□□□□ 0.29
NPHP4-211ENST00000622020 CETN1Q12798 172 aa16.89■□□□□ 0.29
NPHP4-211ENST00000622020 SLMAPQ14BN4 828 aa16.89■□□□□ 0.29
NPHP4-211ENST00000622020 RBM26Q5T8P6 1007 aaKnown RBP16.89■□□□□ 0.29
NPHP4-211ENST00000622020 ART4Q93070 314 aa16.89■□□□□ 0.29
NPHP4-211ENST00000622020 KREMEN1Q96MU8 473 aa16.89■□□□□ 0.29
NPHP4-211ENST00000622020 NACC1Q96RE7 527 aa16.89■□□□□ 0.29
NPHP4-211ENST00000622020 MKNK1Q9BUB5 465 aa16.89■□□□□ 0.29
NPHP4-211ENST00000622020 NSRP1Q9H0G5 558 aaKnown RBP16.89■□□□□ 0.29
NPHP4-211ENST00000622020 AAASQ9NRG9 546 aa16.89■□□□□ 0.29
NPHP4-211ENST00000622020 USP15Q9Y4E8 981 aaPredicted RBP16.89■□□□□ 0.29
NPHP4-211ENST00000622020 O00370 1275 aa16.89■□□□□ 0.29
NPHP4-211ENST00000622020 DIAPH2O60879 1101 aa16.89■□□□□ 0.29
NPHP4-211ENST00000622020 RTN2O75298 545 aa16.89■□□□□ 0.29
NPHP4-211ENST00000622020 KRT5P13647 590 aa16.89■□□□□ 0.29
NPHP4-211ENST00000622020 DRG2P55039 364 aaKnown RBP16.89■□□□□ 0.29
NPHP4-211ENST00000622020 NCALDP61601 193 aa16.89■□□□□ 0.29
NPHP4-211ENST00000622020 CYP4F22Q6NT55 531 aa16.89■□□□□ 0.29
NPHP4-211ENST00000622020 STXBP4Q6ZWJ1 553 aa16.89■□□□□ 0.29
NPHP4-211ENST00000622020 MIGA2Q7L4E1 593 aa16.89■□□□□ 0.29
NPHP4-211ENST00000622020 CBWD2Q8IUF1 395 aa16.89■□□□□ 0.29
NPHP4-211ENST00000622020 SEMA4DQ92854 862 aa16.89■□□□□ 0.29
NPHP4-211ENST00000622020 ZNF622Q969S3 477 aaKnown RBP eCLIP16.89■□□□□ 0.29
NPHP4-211ENST00000622020 MKL1Q969V6 931 aa16.89■□□□□ 0.29
NPHP4-211ENST00000622020 RMDN2Q96LZ7 410 aa16.89■□□□□ 0.29
NPHP4-211ENST00000622020 SLC24A3Q9HC58 644 aa16.89■□□□□ 0.29
NPHP4-211ENST00000622020 HOMER3Q9NSC5 361 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms