RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 MUTYHQ9UIF7 546 aa18.96■□□□□ 0.63
HMGN3-203ENST00000620514 STK24Q9Y6E0 443 aa18.96■□□□□ 0.63
HMGN3-203ENST00000620514 ACKR2O00590 384 aa18.95■□□□□ 0.62
HMGN3-203ENST00000620514 EPCAMP16422 314 aa18.95■□□□□ 0.62
HMGN3-203ENST00000620514 HOXB8P17481 243 aaPredicted RBP18.95■□□□□ 0.62
HMGN3-203ENST00000620514 PPP2R5AQ15172 486 aa18.95■□□□□ 0.62
HMGN3-203ENST00000620514 ZRSR1Q15695 479 aaKnown RBP18.95■□□□□ 0.62
HMGN3-203ENST00000620514 MAPK6Q16659 721 aa18.95■□□□□ 0.62
HMGN3-203ENST00000620514 TMEM132AQ24JP5 1023 aa18.95■□□□□ 0.62
HMGN3-203ENST00000620514 LARP1BQ659C4 914 aaKnown RBP18.95■□□□□ 0.62
HMGN3-203ENST00000620514 KANK3Q6NY19 840 aa18.95■□□□□ 0.62
HMGN3-203ENST00000620514 TAS1R1Q7RTX1 841 aa18.95■□□□□ 0.62
HMGN3-203ENST00000620514 C12orf76Q8N812 135 aaPredicted RBP18.95■□□□□ 0.62
HMGN3-203ENST00000620514 TMEM87AQ8NBN3 555 aa18.95■□□□□ 0.62
HMGN3-203ENST00000620514 SLC22A17Q8WUG5 538 aa18.95■□□□□ 0.62
HMGN3-203ENST00000620514 KIFAP3Q92845 792 aa18.95■□□□□ 0.62
HMGN3-203ENST00000620514 IFT74Q96LB3 600 aa18.95■□□□□ 0.62
HMGN3-203ENST00000620514 RUSC1Q9BVN2 902 aa18.95■□□□□ 0.62
HMGN3-203ENST00000620514 DNM3Q9UQ16 869 aa18.95■□□□□ 0.62
HMGN3-203ENST00000620514 N4BP3O15049 544 aa18.94■□□□□ 0.62
HMGN3-203ENST00000620514 LILRB3O75022 631 aa18.94■□□□□ 0.62
HMGN3-203ENST00000620514 GIT2Q14161 759 aa18.94■□□□□ 0.62
HMGN3-203ENST00000620514 CBX2Q14781 532 aaPredicted RBP18.94■□□□□ 0.62
HMGN3-203ENST00000620514 DAW1Q8N136 415 aa18.94■□□□□ 0.62
HMGN3-203ENST00000620514 FEZF2Q8TBJ5 459 aa18.94■□□□□ 0.62
HMGN3-203ENST00000620514 RABGGTAQ92696 567 aa18.94■□□□□ 0.62
HMGN3-203ENST00000620514 KLHL5Q96PQ7 755 aa18.94■□□□□ 0.62
HMGN3-203ENST00000620514 PNMA5Q96PV4 448 aa18.94■□□□□ 0.62
HMGN3-203ENST00000620514 HERC2P3Q9BVR0 1158 aa18.94■□□□□ 0.62
HMGN3-203ENST00000620514 CXCL16Q9H2A7 254 aa18.94■□□□□ 0.62
HMGN3-203ENST00000620514 SNTG2Q9NY99 539 aa18.94■□□□□ 0.62
HMGN3-203ENST00000620514 CACNG4Q9UBN1 327 aa18.94■□□□□ 0.62
HMGN3-203ENST00000620514 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.94■□□□□ 0.62
HMGN3-203ENST00000620514 TDRD15B5MCY1 1934 aaKnown RBP18.94■□□□□ 0.62
HMGN3-203ENST00000620514 VWA3AA6NCI4 1184 aa18.93■□□□□ 0.62
HMGN3-203ENST00000620514 C2CD2LO14523 706 aa18.93■□□□□ 0.62
HMGN3-203ENST00000620514 HIP1RO75146 1068 aa18.93■□□□□ 0.62
HMGN3-203ENST00000620514 EFEMP2O95967 443 aa18.93■□□□□ 0.62
HMGN3-203ENST00000620514 SOD2P04179 222 aa18.93■□□□□ 0.62
HMGN3-203ENST00000620514 CNPP09543 421 aaKnown RBP18.93■□□□□ 0.62
HMGN3-203ENST00000620514 WEE2P0C1S8 567 aa18.93■□□□□ 0.62
HMGN3-203ENST00000620514 TPRNQ4KMQ1 711 aa18.93■□□□□ 0.62
HMGN3-203ENST00000620514 RARS2Q5T160 578 aaKnown RBP18.93■□□□□ 0.62
HMGN3-203ENST00000620514 NT5DC1Q5TFE4 455 aa18.93■□□□□ 0.62
HMGN3-203ENST00000620514 RINT1Q6NUQ1 792 aa18.93■□□□□ 0.62
HMGN3-203ENST00000620514 PLIN2Q99541 437 aa18.93■□□□□ 0.62
HMGN3-203ENST00000620514 ADAM7Q9H2U9 754 aa18.93■□□□□ 0.62
HMGN3-203ENST00000620514 SP100P23497 879 aaPredicted RBP18.92■□□□□ 0.62
HMGN3-203ENST00000620514 PEX3P56589 373 aa18.92■□□□□ 0.62
HMGN3-203ENST00000620514 GRIK3Q13003 919 aa18.92■□□□□ 0.62
HMGN3-203ENST00000620514 MAPK7Q13164 816 aa18.92■□□□□ 0.62
HMGN3-203ENST00000620514 HERC4Q5GLZ8 1057 aaPredicted RBP18.92■□□□□ 0.62
HMGN3-203ENST00000620514 C1orf186Q6ZWK4 172 aa18.92■□□□□ 0.62
HMGN3-203ENST00000620514 RNF168Q8IYW5 571 aaPredicted RBP18.92■□□□□ 0.62
HMGN3-203ENST00000620514 RPS6KC1Q96S38 1066 aa18.92■□□□□ 0.62
HMGN3-203ENST00000620514 EMILIN2Q9BXX0 1053 aa18.92■□□□□ 0.62
HMGN3-203ENST00000620514 MRPL17Q9NRX2 175 aaKnown RBP18.92■□□□□ 0.62
HMGN3-203ENST00000620514 STK39Q9UEW8 545 aa18.92■□□□□ 0.62
HMGN3-203ENST00000620514 ZMYM2Q9UBW7 1377 aa18.92■□□□□ 0.62
HMGN3-203ENST00000620514 CCDC169A6NNP5 214 aa18.91■□□□□ 0.62
HMGN3-203ENST00000620514 PTGESO14684 152 aa18.91■□□□□ 0.62
HMGN3-203ENST00000620514 RECQL4O94761 1208 aa18.91■□□□□ 0.62
HMGN3-203ENST00000620514 URODP06132 367 aa18.91■□□□□ 0.62
HMGN3-203ENST00000620514 KLRC2P26717 231 aa18.91■□□□□ 0.62
HMGN3-203ENST00000620514 NPTX2P47972 431 aa18.91■□□□□ 0.62
HMGN3-203ENST00000620514 EFNA5P52803 228 aa18.91■□□□□ 0.62
HMGN3-203ENST00000620514 CUL4AQ13619 759 aa18.91■□□□□ 0.62
HMGN3-203ENST00000620514 HYIQ5T013 277 aa18.91■□□□□ 0.62
HMGN3-203ENST00000620514 CES5AQ6NT32 575 aa18.91■□□□□ 0.62
HMGN3-203ENST00000620514 B3GALT6Q96L58 329 aa18.91■□□□□ 0.62
HMGN3-203ENST00000620514 PAAF1Q9BRP4 392 aa18.91■□□□□ 0.62
HMGN3-203ENST00000620514 ADPGKQ9BRR6 497 aa18.91■□□□□ 0.62
HMGN3-203ENST00000620514 COLEC11Q9BWP8 271 aa18.91■□□□□ 0.62
HMGN3-203ENST00000620514 POMKQ9H5K3 350 aa18.91■□□□□ 0.62
HMGN3-203ENST00000620514 DZANK1Q9NVP4 752 aa18.91■□□□□ 0.62
HMGN3-203ENST00000620514 SFI1A8K8P3 1242 aa18.9■□□□□ 0.62
HMGN3-203ENST00000620514 PRR33A8MZF0 331 aa18.9■□□□□ 0.62
HMGN3-203ENST00000620514 K7ERI5 159 aa18.9■□□□□ 0.62
HMGN3-203ENST00000620514 NR1I2O75469 434 aa18.9■□□□□ 0.62
HMGN3-203ENST00000620514 GLUD2P49448 558 aa18.9■□□□□ 0.62
HMGN3-203ENST00000620514 CLCN4P51793 760 aa18.9■□□□□ 0.62
HMGN3-203ENST00000620514 ITIH3Q06033 890 aa18.9■□□□□ 0.62
HMGN3-203ENST00000620514 ATF7IP2Q5U623 682 aa18.9■□□□□ 0.62
HMGN3-203ENST00000620514 KIAA0319Q5VV43 1072 aa18.9■□□□□ 0.62
HMGN3-203ENST00000620514 ARL6IP4Q66PJ3 421 aaKnown RBP18.9■□□□□ 0.62
HMGN3-203ENST00000620514 PPFIBP1Q86W92 1011 aa18.9■□□□□ 0.62
HMGN3-203ENST00000620514 FBXL18Q96ME1 805 aa18.9■□□□□ 0.62
HMGN3-203ENST00000620514 GPR62Q9BZJ7 368 aa18.9■□□□□ 0.62
HMGN3-203ENST00000620514 GDAQ9Y2T3 454 aa18.9■□□□□ 0.62
HMGN3-203ENST00000620514 CASTOR2A6NHX0 329 aa18.89■□□□□ 0.61
HMGN3-203ENST00000620514 RAD51AP2Q09MP3 1159 aa18.89■□□□□ 0.61
HMGN3-203ENST00000620514 TUSC3Q13454 348 aa18.89■□□□□ 0.61
HMGN3-203ENST00000620514 FUT10Q6P4F1 479 aa18.89■□□□□ 0.61
HMGN3-203ENST00000620514 TAS1R3Q7RTX0 852 aa18.89■□□□□ 0.61
HMGN3-203ENST00000620514 CABP7Q86V35 215 aa18.89■□□□□ 0.61
HMGN3-203ENST00000620514 BACH2Q9BYV9 841 aa18.89■□□□□ 0.61
HMGN3-203ENST00000620514 TSHZ2Q9NRE2 1034 aa18.89■□□□□ 0.61
HMGN3-203ENST00000620514 ARHGAP28Q9P2N2 729 aa18.89■□□□□ 0.61
HMGN3-203ENST00000620514 ADAM28Q9UKQ2 775 aa18.89■□□□□ 0.61
HMGN3-203ENST00000620514 VPS37CA5D8V6 355 aaPredicted RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms