RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 TMEM8AQ9HCN3 771 aa9.88□□□□□ -0.83
RBFOX1-223ENST00000620507 ZNF302Q9NR11 478 aa9.88□□□□□ -0.83
RBFOX1-223ENST00000620507 AGO2Q9UKV8 859 aaKnown RBP9.88□□□□□ -0.83
RBFOX1-223ENST00000620507 ZNF148Q9UQR1 794 aa9.88□□□□□ -0.83
RBFOX1-223ENST00000620507 BCORQ6W2J9 1755 aa9.88□□□□□ -0.83
RBFOX1-223ENST00000620507 COL22A1Q8NFW1 1626 aaPredicted RBP9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 CLDN3O15551 220 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 SRGAP2CP0DJJ0 459 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 COPB2P35606 906 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 NPTX2P47972 431 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 MAGOHP61326 146 aaKnown RBP9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 LACTBP83111 547 aaPredicted RBP9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 IFT88Q13099 833 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 TRIP13Q15645 432 aaPredicted RBP9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 XKR3Q5GH77 459 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 ZBTB33Q86T24 672 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 PASD1Q8IV76 773 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 EFCAB13Q8IY85 973 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 MGARPQ8TDB4 240 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 SLC20A1Q8WUM9 679 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 FAM53CQ9NYF3 392 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 TISP43B9A030 160 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 INO80B-WBP1J3KQ70 363 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 SYF2O95926 243 aaKnown RBP9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 TNNC2P02585 160 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 CD58P19256 250 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 GMPSP49915 693 aaPredicted RBP9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 TFAMQ00059 246 aaKnown RBP9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 KIAA1755Q5JYT7 1200 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 XRRA1Q6P2D8 792 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 SRLQ86TD4 932 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 RBM46Q8TBY0 533 aaKnown RBP9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 ZKSCAN4Q969J2 545 aaPredicted RBP9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 MRRFQ96E11 262 aaKnown RBP9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 C11orf70Q9BRQ4 267 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 INO80BQ9C086 356 aaPredicted RBP9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 INTS9Q9NV88 658 aaKnown RBP9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 TMEM51Q9NW97 253 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 GINS2Q9Y248 185 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 CAPN7Q9Y6W3 813 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 A0A1B0GUL6 1792 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 RASGRF2O14827 1237 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 EIF3HO15372 352 aaKnown RBP eCLIP9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 SGPL1O95470 568 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 FAM153BP0C7A2 387 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 ITGA4P13612 1032 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 SCP2P22307 547 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 ACOT2P49753 483 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 PMS2P54278 862 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 PRKCEQ02156 737 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 PGM5Q15124 567 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 ASTE1Q2TB18 679 aaPredicted RBP9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 FAM153CQ494X1 144 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 EPM2AIP1Q7L775 607 aaPredicted RBP9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 NIPA1Q7RTP0 329 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 TMEM143Q96AN5 459 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 RBAKQ9NYW8 714 aaPredicted RBP9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 UVRAGQ9P2Y5 699 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 FAM153AQ9UHL3 310 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 HACL1Q9UJ83 578 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 FAM169AQ9Y6X4 670 aa9.87□□□□□ -0.83
RBFOX1-223ENST00000620507 A0A087WUV0 522 aaPredicted RBP9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 CES2O00748 559 aa9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 MAPTP10636 758 aaKnown RBP9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 IBSPP21815 317 aaPredicted RBP9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 MARK3P27448 753 aa9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 IFNAR2P48551 515 aa9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 MMP14P50281 582 aa9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 YWHAEP62258 255 aaKnown RBP9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 LRRC31Q6UY01 552 aa9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 NT5DC3Q86UY8 548 aa9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 ANKRD42Q8N9B4 389 aa9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 GPRASP2Q96D09 838 aa9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 POP1Q99575 1024 aaKnown RBP9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 ERP44Q9BS26 406 aa9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 PI4K2AQ9BTU6 479 aa9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 HEMGNQ9BXL5 484 aa9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 PXMP2Q9NR77 195 aa9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 TBC1D12O60347 775 aa9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 PPP1R37O75864 691 aa9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 HSD17B3P37058 310 aa9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 JAG1P78504 1218 aa9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 ZNF394Q53GI3 561 aa9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 APOBEC3FQ8IUX4 373 aaKnown RBP9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 TSEN2Q8NCE0 465 aaKnown RBP9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 RDM1Q8NG50 284 aa9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 IL31RAQ8NI17 732 aa9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 DCPSQ96C86 337 aaKnown RBP9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 HVCN1Q96D96 273 aa9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 INPP4AQ96PE3 977 aaPredicted RBP9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 MAK16Q9BXY0 300 aaKnown RBP9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 DNAI2Q9GZS0 605 aa9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 BCAS3Q9H6U6 928 aa9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 CNOT10Q9H9A5 744 aaKnown RBP9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 C17orf75Q9HAS0 396 aa9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 GINM1Q9NU53 330 aa9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 ANAPC5Q9UJX4 755 aa9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 BTAF1O14981 1849 aa9.86□□□□□ -0.83
RBFOX1-223ENST00000620507 NAV1Q8NEY1 1877 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms