RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 KIAA1586Q9HCI6 787 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 HSPBP1Q9NZL4 362 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 MAGEC2Q9UBF1 373 aaPredicted RBP8.77□□□□□ -1.01
CPNE3-209ENST00000620393 LIMA1Q9UHB6 759 aaKnown RBP8.77□□□□□ -1.01
CPNE3-209ENST00000620393 TNFSF13BQ9Y275 285 aa8.77□□□□□ -1.01
CPNE3-209ENST00000620393 NOC2LQ9Y3T9 749 aaKnown RBP8.77□□□□□ -1.01
CPNE3-209ENST00000620393 KCNJ18B7U540 433 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 ABLIM1O14639 778 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 MAPK13O15264 365 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 CLDN3O15551 220 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 B4GALT5O43286 388 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 EXTL3O43909 919 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 TSPAN1O60635 241 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 PQBP1O60828 265 aaKnown RBP8.76□□□□□ -1.01
CPNE3-209ENST00000620393 RPS6KA5O75582 802 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 AKAP3O75969 853 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 ERLIN2O94905 339 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 LDHAP00338 332 aaKnown RBP8.76□□□□□ -1.01
CPNE3-209ENST00000620393 ARF4P18085 180 aaPredicted RBP8.76□□□□□ -1.01
CPNE3-209ENST00000620393 EN2P19622 333 aaPredicted RBP8.76□□□□□ -1.01
CPNE3-209ENST00000620393 FGFR4P22455 802 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 SFPQP23246 707 aaKnown RBP eCLIP8.76□□□□□ -1.01
CPNE3-209ENST00000620393 AXLP30530 894 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 HOXA11P31270 313 aaPredicted RBP8.76□□□□□ -1.01
CPNE3-209ENST00000620393 CASP4P49662 377 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 CYP2J2P51589 502 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 MARSP56192 900 aaKnown RBP8.76□□□□□ -1.01
CPNE3-209ENST00000620393 MCCD1P59942 119 aaPredicted RBP8.76□□□□□ -1.01
CPNE3-209ENST00000620393 MCL1Q07820 350 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 FAAP100Q0VG06 881 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 KCNJ12Q14500 433 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 HSP90AA2PQ14568 343 aaPredicted RBP8.76□□□□□ -1.01
CPNE3-209ENST00000620393 HSP90AA4PQ58FG1 418 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 EEF1DP3Q658K8 133 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 CEP135Q66GS9 1140 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 TRAF7Q6Q0C0 670 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 SARM1Q6SZW1 724 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 CREBRFQ8IUR6 639 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 CCDC155Q8N6L0 562 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 USP38Q8NB14 1042 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 ANKRD20A12PQ8NF67 263 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 KHSRPQ92945 711 aaKnown RBP eCLIP8.76□□□□□ -1.01
CPNE3-209ENST00000620393 BORCS6Q96GS4 357 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 KRTAP3-3Q9BYR6 98 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 KRTAP3-2Q9BYR7 98 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 HAPLN2Q9GZV7 340 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 METTL14Q9HCE5 456 aaKnown RBP8.76□□□□□ -1.01
CPNE3-209ENST00000620393 AGO2Q9UKV8 859 aaKnown RBP8.76□□□□□ -1.01
CPNE3-209ENST00000620393 ST3GAL5Q9UNP4 418 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 FRMD4BQ9Y2L6 1034 aa8.76□□□□□ -1.01
CPNE3-209ENST00000620393 CENPFP49454 3210 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 ZNF233A6NK53 670 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 N4BP3O15049 544 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 GPR182O15218 404 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 OGTO15294 1046 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 SLC16A3O15427 465 aaKnown RBP8.75□□□□□ -1.01
CPNE3-209ENST00000620393 AP5Z1O43299 807 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 SERPINC1P01008 464 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 CTSHP09668 335 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 MCF2P10911 925 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 EPB41P11171 864 aaKnown RBP8.75□□□□□ -1.01
CPNE3-209ENST00000620393 SELPP16109 830 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 MATR3P43243 847 aaKnown RBP eCLIP8.75□□□□□ -1.01
CPNE3-209ENST00000620393 PLCB2Q00722 1185 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 POU5F1Q01860 360 aaKnown RBP8.75□□□□□ -1.01
CPNE3-209ENST00000620393 NR1I3Q14994 352 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 KRT31Q15323 416 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 TMEM132AQ24JP5 1023 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 TRIM60Q495X7 471 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 CCDC40Q4G0X9 1142 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 FBXO47Q5MNV8 452 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 MPZL3Q6UWV2 235 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 APTXQ7Z2E3 356 aaKnown RBP8.75□□□□□ -1.01
CPNE3-209ENST00000620393 UBE2Q1Q7Z7E8 422 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 ZBTB33Q86T24 672 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 FAM228AQ86W67 206 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 FAM186BQ8IYM0 893 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 ZNF687Q8N1G0 1237 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 GPD1LQ8N335 351 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 RDH13Q8NBN7 331 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 ZSWIM2Q8NEG5 633 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 CPB2Q96IY4 423 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 CNOT6LQ96LI5 555 aaKnown RBP8.75□□□□□ -1.01
CPNE3-209ENST00000620393 MFSD14AQ96MC6 490 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 NAP1L5Q96NT1 182 aaPredicted RBP8.75□□□□□ -1.01
CPNE3-209ENST00000620393 TUBGCP2Q9BSJ2 902 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 MSTO1Q9BUK6 570 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 PDZD7Q9H5P4 517 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 AGO3Q9H9G7 860 aaKnown RBP8.75□□□□□ -1.01
CPNE3-209ENST00000620393 ERVK-5Q9HDB9 667 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 CHST12Q9NRB3 414 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 AGPAT5Q9NUQ2 364 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 ARMCX3Q9UH62 379 aaPredicted RBP8.75□□□□□ -1.01
CPNE3-209ENST00000620393 PCDHGA4Q9Y5G9 962 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 CNTNAP2Q9UHC6 1331 aa8.75□□□□□ -1.01
CPNE3-209ENST00000620393 LOXHD1Q8IVV2 1947 aa8.74□□□□□ -1.01
CPNE3-209ENST00000620393 GOLGA8IPA6NC78 632 aa8.74□□□□□ -1.01
CPNE3-209ENST00000620393 GOLGA8JA6NMD2 632 aa8.74□□□□□ -1.01
CPNE3-209ENST00000620393 GHRP10912 638 aa8.74□□□□□ -1.01
CPNE3-209ENST00000620393 MTIF2P46199 727 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms