RNA–Protein interactions for RNA: ENST00000620364.4

COL19A1-205, Transcript of collagen type XIX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL19A1, Length 6,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL19A1-205ENST00000620364 CCDC138Q96M89 665 aa13.13□□□□□ -0.31
COL19A1-205ENST00000620364 TRIM54Q9BYV2 358 aa13.13□□□□□ -0.31
COL19A1-205ENST00000620364 LGALS16A8MUM7 142 aa13.13□□□□□ -0.31
COL19A1-205ENST00000620364 TAP1Q03518 808 aa13.13□□□□□ -0.31
COL19A1-205ENST00000620364 POU5F1BQ06416 359 aa13.13□□□□□ -0.31
COL19A1-205ENST00000620364 GLYCTKQ8IVS8 523 aa13.13□□□□□ -0.31
COL19A1-205ENST00000620364 STKLD1Q8NE28 680 aa13.13□□□□□ -0.31
COL19A1-205ENST00000620364 TEKT4Q8WW24 435 aa13.13□□□□□ -0.31
COL19A1-205ENST00000620364 SH3BP1Q9Y3L3 701 aa13.13□□□□□ -0.31
COL19A1-205ENST00000620364 MYO1DO94832 1006 aa13.12□□□□□ -0.31
COL19A1-205ENST00000620364 HHIPL2Q6UWX4 724 aa13.12□□□□□ -0.31
COL19A1-205ENST00000620364 MTA3Q9BTC8 594 aa13.12□□□□□ -0.31
COL19A1-205ENST00000620364 TRAIPQ9BWF2 469 aa13.12□□□□□ -0.31
COL19A1-205ENST00000620364 FAM95CA0A1B0GW59 222 aa13.12□□□□□ -0.31
COL19A1-205ENST00000620364 PP2D1A8MPX8 630 aa13.12□□□□□ -0.31
COL19A1-205ENST00000620364 CAMTA2O94983 1202 aa13.12□□□□□ -0.31
COL19A1-205ENST00000620364 EIF3BP55884 814 aaKnown RBP13.12□□□□□ -0.31
COL19A1-205ENST00000620364 TPI1P60174 286 aa13.12□□□□□ -0.31
COL19A1-205ENST00000620364 XKR3Q5GH77 459 aa13.12□□□□□ -0.31
COL19A1-205ENST00000620364 TTC17Q96AE7 1141 aa13.12□□□□□ -0.31
COL19A1-205ENST00000620364 SRPK1Q96SB4 655 aaKnown RBP13.12□□□□□ -0.31
COL19A1-205ENST00000620364 L3MBTL1Q9Y468 752 aa13.12□□□□□ -0.31
COL19A1-205ENST00000620364 C1orf167Q5SNV9 1468 aa13.12□□□□□ -0.31
COL19A1-205ENST00000620364 SYNDIG1LA6NDD5 238 aa13.12□□□□□ -0.31
COL19A1-205ENST00000620364 KRT38O76015 456 aa13.12□□□□□ -0.31
COL19A1-205ENST00000620364 NNTQ13423 1086 aa13.12□□□□□ -0.31
COL19A1-205ENST00000620364 TAF11Q15544 211 aa13.12□□□□□ -0.31
COL19A1-205ENST00000620364 BARGINQ6ZT62 677 aa13.12□□□□□ -0.31
COL19A1-205ENST00000620364 SMAP1Q8IYB5 467 aaPredicted RBP13.12□□□□□ -0.31
COL19A1-205ENST00000620364 PDCD7Q8N8D1 485 aaKnown RBP13.12□□□□□ -0.31
COL19A1-205ENST00000620364 SEPT1Q8WYJ6 367 aa13.12□□□□□ -0.31
COL19A1-205ENST00000620364 PLA2G12BQ9BX93 195 aa13.12□□□□□ -0.31
COL19A1-205ENST00000620364 MTMR4Q9NYA4 1195 aa13.12□□□□□ -0.31
COL19A1-205ENST00000620364 PACSIN2Q9UNF0 486 aaPredicted RBP13.12□□□□□ -0.31
COL19A1-205ENST00000620364 CCDC151A5D8V7 595 aa13.12□□□□□ -0.31
COL19A1-205ENST00000620364 SYF2O95926 243 aaKnown RBP13.12□□□□□ -0.31
COL19A1-205ENST00000620364 RBP5P82980 135 aa13.12□□□□□ -0.31
COL19A1-205ENST00000620364 FAM133BQ5BKY9 247 aaKnown RBP13.12□□□□□ -0.31
COL19A1-205ENST00000620364 ANKS3Q6ZW76 656 aa13.12□□□□□ -0.31
COL19A1-205ENST00000620364 MUC3BQ9H195 1237 aa13.12□□□□□ -0.31
COL19A1-205ENST00000620364 PDCD2Q16342 344 aaPredicted RBP13.12□□□□□ -0.31
COL19A1-205ENST00000620364 KLHL38Q2WGJ6 581 aa13.12□□□□□ -0.31
COL19A1-205ENST00000620364 TRIM59Q8IWR1 403 aa13.12□□□□□ -0.31
COL19A1-205ENST00000620364 FAM151AQ8WW52 585 aa13.12□□□□□ -0.31
COL19A1-205ENST00000620364 EPAS1Q99814 870 aa13.12□□□□□ -0.31
COL19A1-205ENST00000620364 SLC38A7Q9NVC3 462 aa13.12□□□□□ -0.31
COL19A1-205ENST00000620364 SCAF8Q9UPN6 1271 aaKnown RBP13.12□□□□□ -0.31
COL19A1-205ENST00000620364 TRPM1Q7Z4N2 1603 aa13.12□□□□□ -0.31
COL19A1-205ENST00000620364 NBPF26B4DH59 902 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 KIAA0391O15091 583 aaKnown RBP13.11□□□□□ -0.31
COL19A1-205ENST00000620364 CTNND1O60716 968 aaKnown RBP13.11□□□□□ -0.31
COL19A1-205ENST00000620364 OR1G1P47890 313 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 CCT5P48643 541 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 TMPRSS15P98073 1019 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 EMC2Q15006 297 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 ZNF746Q6NUN9 644 aaPredicted RBP13.11□□□□□ -0.31
COL19A1-205ENST00000620364 NBPF10Q6P3W6 841 aaKnown RBP13.11□□□□□ -0.31
COL19A1-205ENST00000620364 ACAD11Q709F0 780 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 TRMT10CQ7L0Y3 403 aaKnown RBP13.11□□□□□ -0.31
COL19A1-205ENST00000620364 NBPF15Q8N660 670 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 TEX12Q9BXU0 123 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 FTLP02792 175 aaPredicted RBP13.11□□□□□ -0.31
COL19A1-205ENST00000620364 SNCBQ16143 134 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 ANKRD13AQ8IZ07 590 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 TBC1D19Q8N5T2 526 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 PPHLN1Q8NEY8 458 aaKnown RBP13.11□□□□□ -0.31
COL19A1-205ENST00000620364 ZC3H15Q8WU90 426 aaKnown RBP13.11□□□□□ -0.31
COL19A1-205ENST00000620364 TXLNGQ9NUQ3 528 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 MAGEB2O15479 319 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 HSD17B4P51659 736 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 BCAR1P56945 870 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 KRT17Q04695 432 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 ARHGAP15Q53QZ3 475 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 KDELC2Q7Z4H8 507 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 EHD2Q9NZN4 543 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 ERCC6L2Q5T890 1561 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 CCDC195A0A1B0GUA6 201 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 C17orf102A2RUQ5 167 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 IFT88Q13099 833 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 MGAT5BQ3V5L5 792 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 SAMD7Q7Z3H4 446 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 CHST13Q8NET6 341 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 TMEM39BQ9GZU3 492 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 CASS4Q9NQ75 786 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 ABHD10Q9NUJ1 306 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 POLRMTO00411 1230 aaKnown RBP13.11□□□□□ -0.31
COL19A1-205ENST00000620364 RFC5P40937 340 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 ASAP3Q8TDY4 903 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 RGL1Q9NZL6 768 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 TTC7AQ9ULT0 858 aaPredicted RBP13.11□□□□□ -0.31
COL19A1-205ENST00000620364 SNX9Q9Y5X1 595 aa13.11□□□□□ -0.31
COL19A1-205ENST00000620364 NDUFB10O96000 172 aa13.1□□□□□ -0.31
COL19A1-205ENST00000620364 CD4P01730 458 aa13.1□□□□□ -0.31
COL19A1-205ENST00000620364 TRIM49P0CI25 452 aa13.1□□□□□ -0.31
COL19A1-205ENST00000620364 TRIM49CP0CI26 452 aa13.1□□□□□ -0.31
COL19A1-205ENST00000620364 SLC8A1P32418 973 aa13.1□□□□□ -0.31
COL19A1-205ENST00000620364 CAV1Q03135 178 aa13.1□□□□□ -0.31
COL19A1-205ENST00000620364 ZNF543Q08ER8 600 aa13.1□□□□□ -0.31
COL19A1-205ENST00000620364 SV2CQ496J9 727 aa13.1□□□□□ -0.31
COL19A1-205ENST00000620364 CXorf38Q8TB03 319 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms