RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 CMA1P23946 247 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 ABCD1P33897 745 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 STAT6P42226 847 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 BCAR1P56945 870 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 KRT85P78386 507 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 NUCB2P80303 420 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 MCL1Q07820 350 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 EHHADHQ08426 723 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 PTPROQ16827 1216 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 DCAF4L1Q3SXM0 396 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 ZNF720Q7Z2F6 126 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 HAUS6Q7Z4H7 955 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 ZNF280BQ86YH2 543 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 COLGALT2Q8IYK4 626 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 RNF168Q8IYW5 571 aaPredicted RBP9.07□□□□□ -0.96
NEK3-209ENST00000618856 IQUBQ8NA54 791 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 RNF169Q8NCN4 708 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 SLC17A8Q8NDX2 589 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 C7orf25Q9BPX7 421 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 TMEM175Q9BSA9 504 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 MRPL4Q9BYD3 311 aaKnown RBP9.07□□□□□ -0.96
NEK3-209ENST00000618856 SCAND2PQ9GZW5 306 aaPredicted RBP9.07□□□□□ -0.96
NEK3-209ENST00000618856 MAGEF1Q9HAY2 307 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 ALG13Q9NP73 1137 aaKnown RBP9.07□□□□□ -0.96
NEK3-209ENST00000618856 OLFML3Q9NRN5 406 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 SEL1LQ9UBV2 794 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 TBX20Q9UMR3 447 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 PCDHB12Q9Y5F1 795 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 STYXL1Q9Y6J8 313 aa9.07□□□□□ -0.96
NEK3-209ENST00000618856 MYO9BQ13459 2157 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 A0A1W2PQ27 194 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 A0A1W2PQ64 194 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 A0A1W2PQD8 194 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 PTGESO14684 152 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 TOM1L1O75674 476 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 ADRB2P07550 413 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 GAP43P17677 238 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 AKAP5P24588 427 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 PPM1AP35813 382 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 MLH1P40692 756 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 GRM5P41594 1212 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 ME1P48163 572 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 CTC1Q2NKJ3 1217 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 FOXD4L6Q3SYB3 417 aaPredicted RBP9.06□□□□□ -0.96
NEK3-209ENST00000618856 LONRF3Q496Y0 759 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 TIGD5Q53EQ6 642 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 PDE12Q6L8Q7 609 aaKnown RBP9.06□□□□□ -0.96
NEK3-209ENST00000618856 SLC39A4Q6P5W5 647 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 MPZL3Q6UWV2 235 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 FOXD4L3Q6VB84 417 aaPredicted RBP9.06□□□□□ -0.96
NEK3-209ENST00000618856 TMEM173Q86WV6 379 aaPredicted RBP9.06□□□□□ -0.96
NEK3-209ENST00000618856 MAP4K3Q8IVH8 894 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 HACE1Q8IYU2 909 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 MYCT1Q8N699 235 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 RASSF8Q8NHQ8 419 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 URGCPQ8TCY9 931 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 BCL7CQ8WUZ0 217 aaPredicted RBP9.06□□□□□ -0.96
NEK3-209ENST00000618856 POF1BQ8WVV4 589 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 MRPS27Q92552 414 aaKnown RBP9.06□□□□□ -0.96
NEK3-209ENST00000618856 HVCN1Q96D96 273 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 IGSF21Q96ID5 467 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 SPATA32Q96LK8 384 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 ZFP42Q96MM3 310 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 ZNF558Q96NG5 402 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 GAD1Q99259 594 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 PYM1Q9BRP8 204 aaKnown RBP9.06□□□□□ -0.96
NEK3-209ENST00000618856 TARS2Q9BW92 718 aaKnown RBP9.06□□□□□ -0.96
NEK3-209ENST00000618856 VN1R3Q9BXE9 311 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 PANK2Q9BZ23 570 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 TRIM9Q9C026 710 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 TRIM6Q9C030 488 aaPredicted RBP9.06□□□□□ -0.96
NEK3-209ENST00000618856 HAPLN2Q9GZV7 340 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 CDT1Q9H211 546 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 CXCL16Q9H2A7 254 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 SPG21Q9NZD8 308 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 DNAJB4Q9UDY4 337 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 KCNH3Q9ULD8 1083 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 MYH11P35749 1972 aa9.06□□□□□ -0.96
NEK3-209ENST00000618856 POLR2DO15514 142 aaKnown RBP9.05□□□□□ -0.96
NEK3-209ENST00000618856 ACTN4O43707 911 aaKnown RBP9.05□□□□□ -0.96
NEK3-209ENST00000618856 LILRB3O75022 631 aa9.05□□□□□ -0.96
NEK3-209ENST00000618856 RECQL4O94761 1208 aa9.05□□□□□ -0.96
NEK3-209ENST00000618856 FAM13AO94988 1023 aa9.05□□□□□ -0.96
NEK3-209ENST00000618856 POMCP01189 267 aa9.05□□□□□ -0.96
NEK3-209ENST00000618856 SLFN14P0C7P3 912 aa9.05□□□□□ -0.96
NEK3-209ENST00000618856 NMT1P30419 496 aaKnown RBP9.05□□□□□ -0.96
NEK3-209ENST00000618856 IRS1P35568 1242 aa9.05□□□□□ -0.96
NEK3-209ENST00000618856 PBX3P40426 434 aa9.05□□□□□ -0.96
NEK3-209ENST00000618856 SLC11A1P49279 550 aa9.05□□□□□ -0.96
NEK3-209ENST00000618856 ALDH7A1P49419 539 aaKnown RBP9.05□□□□□ -0.96
NEK3-209ENST00000618856 SCNN1GP51170 649 aa9.05□□□□□ -0.96
NEK3-209ENST00000618856 ERVFC1P60507 584 aa9.05□□□□□ -0.96
NEK3-209ENST00000618856 GRIK3Q13003 919 aa9.05□□□□□ -0.96
NEK3-209ENST00000618856 KCNC3Q14003 757 aa9.05□□□□□ -0.96
NEK3-209ENST00000618856 DHX8Q14562 1220 aaKnown RBP9.05□□□□□ -0.96
NEK3-209ENST00000618856 DYMQ7RTS9 669 aa9.05□□□□□ -0.96
NEK3-209ENST00000618856 APBB1IPQ7Z5R6 666 aaPredicted RBP9.05□□□□□ -0.96
NEK3-209ENST00000618856 FAM178BQ8IXR5 827 aa9.05□□□□□ -0.96
NEK3-209ENST00000618856 PDILTQ8N807 584 aa9.05□□□□□ -0.96
NEK3-209ENST00000618856 CEP120Q8N960 986 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms