RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 RBM26Q5T8P6 1007 aaKnown RBP4.67□□□□□ -1.66
SEC22B-202ENST00000618538 MEX3CQ5U5Q3 659 aaKnown RBP4.67□□□□□ -1.66
SEC22B-202ENST00000618538 DUPD1Q68J44 220 aa4.67□□□□□ -1.66
SEC22B-202ENST00000618538 C6orf89Q6UWU4 347 aa4.67□□□□□ -1.66
SEC22B-202ENST00000618538 LRIG3Q6UXM1 1119 aa4.67□□□□□ -1.66
SEC22B-202ENST00000618538 KRT27Q7Z3Y8 459 aa4.67□□□□□ -1.66
SEC22B-202ENST00000618538 NOP9Q86U38 636 aaKnown RBP4.67□□□□□ -1.66
SEC22B-202ENST00000618538 NLRP14Q86W24 1093 aa4.67□□□□□ -1.66
SEC22B-202ENST00000618538 SLC9A9Q8IVB4 645 aa4.67□□□□□ -1.66
SEC22B-202ENST00000618538 FAM178BQ8IXR5 827 aa4.67□□□□□ -1.66
SEC22B-202ENST00000618538 PRELID2Q8N945 189 aa4.67□□□□□ -1.66
SEC22B-202ENST00000618538 C18orf8Q96DM3 657 aa4.67□□□□□ -1.66
SEC22B-202ENST00000618538 AGBL1Q96MI9 1066 aa4.67□□□□□ -1.66
SEC22B-202ENST00000618538 KREMEN1Q96MU8 473 aa4.67□□□□□ -1.66
SEC22B-202ENST00000618538 CCT8L2Q96SF2 557 aa4.67□□□□□ -1.66
SEC22B-202ENST00000618538 HERPUD2Q9BSE4 406 aa4.67□□□□□ -1.66
SEC22B-202ENST00000618538 PAGR1Q9BTK6 254 aa4.67□□□□□ -1.66
SEC22B-202ENST00000618538 WDR11Q9BZH6 1224 aa4.67□□□□□ -1.66
SEC22B-202ENST00000618538 MTFR1LQ9H019 292 aa4.67□□□□□ -1.66
SEC22B-202ENST00000618538 EPN3Q9H201 632 aa4.67□□□□□ -1.66
SEC22B-202ENST00000618538 SLITRK6Q9H5Y7 841 aa4.67□□□□□ -1.66
SEC22B-202ENST00000618538 QTRT2Q9H974 415 aaKnown RBP4.67□□□□□ -1.66
SEC22B-202ENST00000618538 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.67□□□□□ -1.66
SEC22B-202ENST00000618538 GPRC5CQ9NQ84 441 aa4.67□□□□□ -1.66
SEC22B-202ENST00000618538 NPDC1Q9NQX5 325 aaPredicted RBP4.67□□□□□ -1.66
SEC22B-202ENST00000618538 PGAP2Q9UHJ9 254 aa4.67□□□□□ -1.66
SEC22B-202ENST00000618538 NOCTQ9UK39 431 aaKnown RBP4.67□□□□□ -1.66
SEC22B-202ENST00000618538 TELO2Q9Y4R8 837 aa4.67□□□□□ -1.66
SEC22B-202ENST00000618538 UBE4BO95155 1302 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 A0A087WUV0 522 aaPredicted RBP4.66□□□□□ -1.66
SEC22B-202ENST00000618538 HMGB1P1B2RPK0 211 aaPredicted RBP4.66□□□□□ -1.66
SEC22B-202ENST00000618538 CCDC188H7C350 402 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 GCOM1H8Y6P7 765 aaPredicted RBP4.66□□□□□ -1.66
SEC22B-202ENST00000618538 IPO5O00410 1097 aaKnown RBP4.66□□□□□ -1.66
SEC22B-202ENST00000618538 EBAG9O00559 213 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 KIAA0391O15091 583 aaKnown RBP4.66□□□□□ -1.66
SEC22B-202ENST00000618538 PPFIA2O75334 1257 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 SGPL1O95470 568 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 POLR2MP0CAP2 368 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 ADSSP30520 456 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 CTNNA1P35221 906 aaKnown RBP4.66□□□□□ -1.66
SEC22B-202ENST00000618538 PEX5P50542 639 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 MRPS9P82933 396 aaKnown RBP4.66□□□□□ -1.66
SEC22B-202ENST00000618538 DHX9Q08211 1270 aaKnown RBP4.66□□□□□ -1.66
SEC22B-202ENST00000618538 PPP2R5AQ15172 486 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 SIX1Q15475 284 aaPredicted RBP4.66□□□□□ -1.66
SEC22B-202ENST00000618538 TTC31Q49AM3 519 aaPredicted RBP4.66□□□□□ -1.66
SEC22B-202ENST00000618538 CC2D2BQ6DHV5 1058 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 MCTP2Q6DN12 878 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 LDHDQ86WU2 507 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 MICALL1Q8N3F8 863 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 MDM1Q8TC05 714 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 EPS8L1Q8TE68 723 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 UBLCP1Q8WVY7 318 aaPredicted RBP4.66□□□□□ -1.66
SEC22B-202ENST00000618538 CLEC4DQ8WXI8 215 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 PPM1EQ8WY54 764 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 SEMA4DQ92854 862 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 CD101Q93033 1021 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 TLCD1Q96CP7 247 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 BTBD6Q96KE9 485 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 GMLQ99445 158 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 ZNF577Q9BSK1 485 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 KIFC3Q9BVG8 833 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 TMEM39BQ9GZU3 492 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 CARD9Q9H257 536 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 ADAM7Q9H2U9 754 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 CENPHQ9H3R5 247 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 KCNH7Q9NS40 1196 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 TOPORSQ9NS56 1045 aaPredicted RBP4.66□□□□□ -1.66
SEC22B-202ENST00000618538 ODF2LQ9ULJ1 636 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 DNMT3AQ9Y6K1 912 aaPredicted RBP4.66□□□□□ -1.66
SEC22B-202ENST00000618538 ZHX2Q9Y6X8 837 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 ASTN2O75129 1339 aaPredicted RBP4.66□□□□□ -1.66
SEC22B-202ENST00000618538 ATXN2Q99700 1313 aaKnown RBP4.66□□□□□ -1.66
SEC22B-202ENST00000618538 ANKRD62A6NC57 917 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 GOLGA8IPA6NC78 632 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 GOLGA8JA6NMD2 632 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 K7ENM7 598 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 TRAPPC3O43617 180 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 EXOC3O60645 756 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 CAND2O75155 1236 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 FAM107AO95990 144 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 CCNE2O96020 404 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 ALAS1P13196 640 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 LMNB1P20700 586 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 RPL21P46778 160 aaKnown RBP4.66□□□□□ -1.66
SEC22B-202ENST00000618538 RARRES1P49788 294 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 GSK3AP49840 483 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 HSD17B4P51659 736 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 HADHBP55084 474 aaKnown RBP4.66□□□□□ -1.66
SEC22B-202ENST00000618538 SOX10P56693 466 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 SF3B2Q13435 895 aaKnown RBP4.66□□□□□ -1.66
SEC22B-202ENST00000618538 PRPF4BQ13523 1007 aaKnown RBP4.66□□□□□ -1.66
SEC22B-202ENST00000618538 IFI16Q16666 785 aaKnown RBP4.66□□□□□ -1.66
SEC22B-202ENST00000618538 SLC39A4Q6P5W5 647 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 MIGA2Q7L4E1 593 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 SLC47A2Q86VL8 602 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 JAMLQ86YT9 394 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 CBWD2Q8IUF1 395 aa4.66□□□□□ -1.66
SEC22B-202ENST00000618538 FBXO25Q8TCJ0 367 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms