RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 CALN1Q9BXU9 219 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 MLXIPLQ9NP71 852 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 HACD3Q9P035 362 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 SUN2Q9UH99 717 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 PIK3R2O00459 728 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 TRAPPC3O43617 180 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 TRIM28Q13263 835 aaKnown RBP10.87□□□□□ -0.67
CUL4A-212ENST00000617546 MEI1Q5TIA1 1274 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 DAGLBQ8NCG7 672 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 C1orf131Q8NDD1 294 aaKnown RBP10.87□□□□□ -0.67
CUL4A-212ENST00000617546 FBXL13Q8NEE6 735 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 TPCN2Q8NHX9 752 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 ACSBG1Q96GR2 724 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 BHMT2Q9H2M3 363 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 APEX2Q9UBZ4 518 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 RNF103-CHMP3A0A140T963 221 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 FAM237AA0A1B0GTK4 181 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 KRR1Q13601 381 aaKnown RBP10.87□□□□□ -0.67
CUL4A-212ENST00000617546 LONRF1Q17RB8 773 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 TRMT5Q32P41 509 aaKnown RBP10.87□□□□□ -0.67
CUL4A-212ENST00000617546 LRRC8BQ6P9F7 803 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 OR2W6PQ8NHA6 318 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 NPHS2Q9NP85 383 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 WARS2Q9UGM6 360 aaKnown RBP10.87□□□□□ -0.67
CUL4A-212ENST00000617546 ALKQ9UM73 1620 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 SYCE1LA8MT33 242 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 CAPN9O14815 690 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 ZBTB5O15062 677 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 TBX3O15119 743 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 COILP38432 576 aaPredicted RBP10.87□□□□□ -0.67
CUL4A-212ENST00000617546 PRELPP51888 382 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 SLC29A2Q14542 456 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 MTHFD1LQ6UB35 978 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 CCDC28BQ9BUN5 200 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 MANSC1Q9H8J5 431 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 TUFT1Q9NNX1 390 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 PRR36Q9H6K5 1346 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 EIF3DO15371 548 aaKnown RBP eCLIP10.87□□□□□ -0.67
CUL4A-212ENST00000617546 PJA2O43164 708 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 WFS1O76024 890 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 HSPA1AP0DMV8 641 aaKnown RBP10.87□□□□□ -0.67
CUL4A-212ENST00000617546 HSPA1BP0DMV9 641 aaKnown RBP10.87□□□□□ -0.67
CUL4A-212ENST00000617546 FCER1AP12319 257 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 STX3Q13277 289 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 SYDE2Q5VT97 1194 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 FAM160B2Q86V87 743 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 DNAAF3Q8N9W5 541 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 HIPK4Q8NE63 616 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 ZFRQ96KR1 1074 aaKnown RBP10.87□□□□□ -0.67
CUL4A-212ENST00000617546 PICK1Q9NRD5 415 aa10.87□□□□□ -0.67
CUL4A-212ENST00000617546 DBR1Q9UK59 544 aaKnown RBP10.87□□□□□ -0.67
CUL4A-212ENST00000617546 WDR64B1ANS9 1081 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 ENO1P06733 434 aaKnown RBP10.86□□□□□ -0.67
CUL4A-212ENST00000617546 SARSP49591 514 aaKnown RBP10.86□□□□□ -0.67
CUL4A-212ENST00000617546 DYNLT1P63172 113 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 PRUNE1Q86TP1 453 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 ZNF677Q86XU0 584 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 DDHD1Q8NEL9 900 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 PPP2R3CQ969Q6 453 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 ZBTB18Q99592 522 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 PCIF1Q9H4Z3 704 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 AS3MTQ9HBK9 375 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 SAR1AQ9NR31 198 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 BSDC1Q9NW68 430 aaPredicted RBP10.86□□□□□ -0.67
CUL4A-212ENST00000617546 CORO1CQ9ULV4 474 aaPredicted RBP10.86□□□□□ -0.67
CUL4A-212ENST00000617546 B2RBV5 119 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 ROR1Q01973 937 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 CROCCP3Q8IVE0 287 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 KIF2BQ8N4N8 673 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 COA7Q96BR5 231 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 STX18Q9P2W9 335 aaKnown RBP10.86□□□□□ -0.67
CUL4A-212ENST00000617546 HNRNPRO43390 633 aaKnown RBP10.86□□□□□ -0.67
CUL4A-212ENST00000617546 PDHBP11177 359 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 MAGEA4P43358 317 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 ARSEP51690 589 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 ABCB5Q2M3G0 1257 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 CEP55Q53EZ4 464 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 MIS18BP1Q6P0N0 1132 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 PI16Q6UXB8 463 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 SPDYE1Q8NFV5 336 aaPredicted RBP10.86□□□□□ -0.67
CUL4A-212ENST00000617546 EML4Q9HC35 981 aaKnown RBP10.86□□□□□ -0.67
CUL4A-212ENST00000617546 PHTF1Q9UMS5 762 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 GOLGA8MH3BSY2 632 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 EYA4O95677 639 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 ALDH1B1P30837 517 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 CDK8P49336 464 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 FOXO4P98177 505 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 ROR2Q01974 943 aaKnown RBP10.86□□□□□ -0.67
CUL4A-212ENST00000617546 RCN1Q15293 331 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 BBS5Q8N3I7 341 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 SIKE1Q9BRV8 207 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.86□□□□□ -0.671e-9■■■■□ 23.4
CUL4A-212ENST00000617546 HPS5Q9UPZ3 1129 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 NEU2Q9Y3R4 380 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 SLC4A7Q9Y6M7 1214 aa10.86□□□□□ -0.67
CUL4A-212ENST00000617546 H0Y626 953 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 GNPATO15228 680 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 DAB1O75553 588 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 PDE5AO76074 875 aa10.85□□□□□ -0.67
CUL4A-212ENST00000617546 TRIM16O95361 564 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms