RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 MYL7Q01449 175 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 DRAP1Q14919 205 aaPredicted RBP12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 TUBB8Q3ZCM7 444 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 STXBP4Q6ZWJ1 553 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 USP50Q70EL3 339 aaPredicted RBP12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 EEPD1Q7L9B9 569 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 CBWD2Q8IUF1 395 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 TSEN2Q8NCE0 465 aaKnown RBP12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 HDAC7Q8WUI4 952 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 NOX5Q96PH1 765 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 ALS2CR12Q96Q35 445 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 CCT8L2Q96SF2 557 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 POP1Q99575 1024 aaKnown RBP12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 MKNK1Q9BUB5 465 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 JPH1Q9HDC5 661 aaPredicted RBP12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 NAGPAQ9UK23 515 aa12.32□□□□□ -0.44
PCDHGA9-202ENST00000616887 GOLGA6L7A0A1B0GV03 622 aa12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 DDX3XO00571 662 aaKnown RBP eCLIP12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 STBD1O95210 358 aa12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 PPARDQ03181 441 aa12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 NNTQ13423 1086 aa12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 NFIL3Q16649 462 aa12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 ACCSLQ4AC99 568 aa12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 CYFIP1Q7L576 1253 aa12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 LNX1Q8TBB1 728 aaPredicted RBP12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 ZC3H15Q8WU90 426 aaKnown RBP12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 OTUD5Q96G74 571 aa12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 TAF1DQ9H5J8 278 aaPredicted RBP12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 ELP3Q9H9T3 547 aa12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 ACP6Q9NPH0 428 aa12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 TOPORSQ9NS56 1045 aaPredicted RBP12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 SEPT9Q9UHD8 586 aaPredicted RBP12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 GRID2IPA4D2P6 1211 aa12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 ENO4A6NNW6 628 aa12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 KRT14P02533 472 aa12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 ACTR2P61160 394 aa12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 PRKCEQ02156 737 aa12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 NAB2Q15742 525 aa12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 ALKBH5Q6P6C2 394 aaKnown RBP12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 SEPT14Q6ZU15 432 aa12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 CCDC121Q6ZUS5 278 aa12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 CCDC50Q8IVM0 306 aa12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 GLYCTKQ8IVS8 523 aa12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 ARHGEF19Q8IW93 802 aa12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 SULF1Q8IWU6 871 aa12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 TMEM161BQ8NDZ6 487 aa12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 CCDC26Q8TAB7 109 aa12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 MICAL1Q8TDZ2 1067 aa12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 GPRASP2Q96D09 838 aa12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 ZBTB10Q96DT7 871 aa12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 PAGR1Q9BTK6 254 aa12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 XPNPEP1Q9NQW7 623 aa12.31□□□□□ -0.44
PCDHGA9-202ENST00000616887 KIAA1217Q5T5P2 1943 aa12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 DENND3A2RUS2 1198 aa12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 HSF2BPO75031 334 aa12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 SFNP31947 248 aa12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 OAZ1P54368 228 aa12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 GTF2BQ00403 316 aa12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 CKAP4Q07065 602 aaKnown RBP12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 SPRED3Q2MJR0 410 aa12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 NOL9Q5SY16 702 aaKnown RBP12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 SLC39A4Q6P5W5 647 aa12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 GADL1Q6ZQY3 521 aa12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 NLRP14Q86W24 1093 aa12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 ANKRD35Q8N283 1001 aa12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 LMO3Q8TAP4 145 aa12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 MYCBPAPQ8TBZ2 947 aa12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 CCDC127Q96BQ5 260 aa12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 TBC1D31Q96DN5 1066 aa12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 RSRC1Q96IZ7 334 aaKnown RBP12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 ACCSQ96QU6 501 aa12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 TAS2R14Q9NYV8 317 aa12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 CPSF2Q9P2I0 782 aaKnown RBP12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 SLC9A2Q9UBY0 812 aa12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 GTPBP10A4D1E9 387 aaKnown RBP12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 FDX1P10109 184 aa12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 VAMP7P51809 220 aa12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 NCKAP1LP55160 1127 aa12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 PTGISQ16647 500 aa12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 MTERF2Q49AM1 385 aa12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 EAPPQ56P03 285 aaPredicted RBP12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 ZNF746Q6NUN9 644 aaPredicted RBP12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 ZNF784Q8NCA9 323 aaPredicted RBP12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 U2AF1L4Q8WU68 220 aaKnown RBP12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 LMBR1Q8WVP7 490 aa12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 RPGRIP1Q96KN7 1286 aa12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 APEX2Q9UBZ4 518 aa12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 DMGDHQ9UI17 866 aaKnown RBP12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 LCTP09848 1927 aa12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 IGSF9BQ9UPX0 1349 aa12.3□□□□□ -0.44
PCDHGA9-202ENST00000616887 E7EVH7 732 aa12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 DNM1LO00429 736 aa12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 ATP2C2O75185 946 aa12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 ATP4AP20648 1035 aa12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 SLC8A1P32418 973 aa12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 SOX5P35711 763 aa12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 PRKCIP41743 596 aa12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 SLC7A5Q01650 507 aa12.29□□□□□ -0.44
PCDHGA9-202ENST00000616887 SNX1Q13596 522 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms