RNA–Protein interactions for RNA: ENST00000616502.4

EPHB4-210, Transcript of EPH receptor B4, humanhuman

TSL 5 BASIC

Gene EPHB4, Length 3,737 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-210ENST00000616502 STRN3Q13033 797 aa15.34■□□□□ 0.05
EPHB4-210ENST00000616502 MTM1Q13496 603 aa15.34■□□□□ 0.05
EPHB4-210ENST00000616502 DNAJC19Q96DA6 116 aa15.34■□□□□ 0.05
EPHB4-210ENST00000616502 TCHPQ9BT92 498 aa15.34■□□□□ 0.05
EPHB4-210ENST00000616502 INTS2Q9H0H0 1204 aaKnown RBP15.34■□□□□ 0.05
EPHB4-210ENST00000616502 BATF3Q9NR55 127 aa15.34■□□□□ 0.05
EPHB4-210ENST00000616502 ZNF70Q9UC06 446 aaPredicted RBP15.34■□□□□ 0.05
EPHB4-210ENST00000616502 IKBKGQ9Y6K9 419 aa15.34■□□□□ 0.05
EPHB4-210ENST00000616502 ZHX2Q9Y6X8 837 aa15.34■□□□□ 0.05
EPHB4-210ENST00000616502 EXOC1LA0A1B0GW35 172 aa15.34■□□□□ 0.05
EPHB4-210ENST00000616502 PHF2O75151 1096 aa15.34■□□□□ 0.05
EPHB4-210ENST00000616502 ATF7P17544 494 aaPredicted RBP15.34■□□□□ 0.05
EPHB4-210ENST00000616502 KRT17Q04695 432 aa15.34■□□□□ 0.05
EPHB4-210ENST00000616502 DNAJC3Q13217 504 aa15.34■□□□□ 0.05
EPHB4-210ENST00000616502 CLUL1Q15846 466 aa15.34■□□□□ 0.05
EPHB4-210ENST00000616502 CHADLQ6NUI6 762 aa15.34■□□□□ 0.05
EPHB4-210ENST00000616502 EPM2AIP1Q7L775 607 aaPredicted RBP15.34■□□□□ 0.05
EPHB4-210ENST00000616502 DPH6Q7L8W6 267 aa15.34■□□□□ 0.05
EPHB4-210ENST00000616502 RHOT2Q8IXI1 618 aa15.34■□□□□ 0.05
EPHB4-210ENST00000616502 ATG4AQ8WYN0 398 aa15.34■□□□□ 0.05
EPHB4-210ENST00000616502 KRT35Q92764 455 aa15.34■□□□□ 0.05
EPHB4-210ENST00000616502 POP1Q99575 1024 aaKnown RBP15.34■□□□□ 0.05
EPHB4-210ENST00000616502 GANQ9H2C0 597 aa15.34■□□□□ 0.05
EPHB4-210ENST00000616502 VCXQ9H320 206 aa15.34■□□□□ 0.05
EPHB4-210ENST00000616502 PICK1Q9NRD5 415 aa15.34■□□□□ 0.05
EPHB4-210ENST00000616502 TAS2R14Q9NYV8 317 aa15.34■□□□□ 0.05
EPHB4-210ENST00000616502 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.34■□□□□ 0.05
EPHB4-210ENST00000616502 COL14A1Q05707 1796 aaKnown RBP15.34■□□□□ 0.05
EPHB4-210ENST00000616502 SPEF2Q9C093 1822 aa15.34■□□□□ 0.05
EPHB4-210ENST00000616502 PTENP60484 403 aa15.33■□□□□ 0.05
EPHB4-210ENST00000616502 GPC5P78333 572 aa15.33■□□□□ 0.05
EPHB4-210ENST00000616502 EDRF1Q3B7T1 1238 aa15.33■□□□□ 0.05
EPHB4-210ENST00000616502 DALRD3Q5D0E6 543 aaKnown RBP15.33■□□□□ 0.05
EPHB4-210ENST00000616502 SLC30A5Q8TAD4 765 aa15.33■□□□□ 0.05
EPHB4-210ENST00000616502 RBM46Q8TBY0 533 aaKnown RBP15.33■□□□□ 0.05
EPHB4-210ENST00000616502 RNF25Q96BH1 459 aaPredicted RBP15.33■□□□□ 0.05
EPHB4-210ENST00000616502 DYDC2Q96IM9 177 aa15.33■□□□□ 0.05
EPHB4-210ENST00000616502 DNAJC18Q9H819 358 aa15.33■□□□□ 0.05
EPHB4-210ENST00000616502 YDJCA8MPS7 323 aa15.33■□□□□ 0.04
EPHB4-210ENST00000616502 BAG2O95816 211 aa15.33■□□□□ 0.04
EPHB4-210ENST00000616502 MARCKSL1P49006 195 aa15.33■□□□□ 0.04
EPHB4-210ENST00000616502 RASSF2P50749 326 aa15.33■□□□□ 0.04
EPHB4-210ENST00000616502 CCNHP51946 323 aaPredicted RBP15.33■□□□□ 0.04
EPHB4-210ENST00000616502 IRX1P78414 480 aaPredicted RBP15.33■□□□□ 0.04
EPHB4-210ENST00000616502 CXCL9Q07325 125 aa15.33■□□□□ 0.04
EPHB4-210ENST00000616502 ITIH4Q14624 930 aa15.33■□□□□ 0.04
EPHB4-210ENST00000616502 ANKRD35Q8N283 1001 aa15.33■□□□□ 0.04
EPHB4-210ENST00000616502 TMEM237Q96Q45 408 aa15.33■□□□□ 0.04
EPHB4-210ENST00000616502 MTMR9Q96QG7 549 aa15.33■□□□□ 0.04
EPHB4-210ENST00000616502 WRNIP1Q96S55 665 aa15.33■□□□□ 0.04
EPHB4-210ENST00000616502 CARD9Q9H257 536 aa15.33■□□□□ 0.04
EPHB4-210ENST00000616502 LRRC4CQ9HCJ2 640 aa15.33■□□□□ 0.04
EPHB4-210ENST00000616502 ALG13Q9NP73 1137 aaKnown RBP15.33■□□□□ 0.04
EPHB4-210ENST00000616502 PIM2Q9P1W9 311 aa15.33■□□□□ 0.04
EPHB4-210ENST00000616502 HAO1Q9UJM8 370 aa15.33■□□□□ 0.04
EPHB4-210ENST00000616502 LRP6O75581 1613 aa15.33■□□□□ 0.04
EPHB4-210ENST00000616502 POTEJP0CG39 1038 aa15.33■□□□□ 0.04
EPHB4-210ENST00000616502 MAPK4P31152 587 aa15.33■□□□□ 0.04
EPHB4-210ENST00000616502 RWDD2BP57060 319 aa15.33■□□□□ 0.04
EPHB4-210ENST00000616502 ANKRD20A3Q5VUR7 823 aa15.33■□□□□ 0.04
EPHB4-210ENST00000616502 SH3BP5LQ7L8J4 393 aa15.33■□□□□ 0.04
EPHB4-210ENST00000616502 CATSPER3Q86XQ3 398 aa15.33■□□□□ 0.04
EPHB4-210ENST00000616502 SPDYE1Q8NFV5 336 aaPredicted RBP15.33■□□□□ 0.04
EPHB4-210ENST00000616502 DTX3LQ8TDB6 740 aa15.33■□□□□ 0.04
EPHB4-210ENST00000616502 ZNF148Q9UQR1 794 aa15.33■□□□□ 0.04
EPHB4-210ENST00000616502 FOXN3O00409 490 aaPredicted RBP15.32■□□□□ 0.04
EPHB4-210ENST00000616502 ATP2A1O14983 1001 aa15.32■□□□□ 0.04
EPHB4-210ENST00000616502 KRT16P08779 473 aa15.32■□□□□ 0.04
EPHB4-210ENST00000616502 HSPA6P17066 643 aa15.32■□□□□ 0.04
EPHB4-210ENST00000616502 MTMR2Q13614 643 aa15.32■□□□□ 0.04
EPHB4-210ENST00000616502 FAM102BQ5T8I3 360 aa15.32■□□□□ 0.04
EPHB4-210ENST00000616502 NUP85Q9BW27 656 aa15.32■□□□□ 0.04
EPHB4-210ENST00000616502 IQCGQ9H095 443 aaKnown RBP15.32■□□□□ 0.04
EPHB4-210ENST00000616502 PARVGQ9HBI0 331 aa15.32■□□□□ 0.04
EPHB4-210ENST00000616502 CCDC160A6NGH7 325 aa15.32■□□□□ 0.04
EPHB4-210ENST00000616502 ASAP2O43150 1006 aa15.32■□□□□ 0.04
EPHB4-210ENST00000616502 HOXA10P31260 410 aaPredicted RBP15.32■□□□□ 0.04
EPHB4-210ENST00000616502 HMGCS2P54868 508 aa15.32■□□□□ 0.04
EPHB4-210ENST00000616502 RASIP1Q5U651 963 aa15.32■□□□□ 0.04
EPHB4-210ENST00000616502 ZC3H18Q86VM9 953 aaKnown RBP15.32■□□□□ 0.04
EPHB4-210ENST00000616502 C4orf33Q8N1A6 199 aa15.32■□□□□ 0.04
EPHB4-210ENST00000616502 SLC20A1Q8WUM9 679 aa15.32■□□□□ 0.04
EPHB4-210ENST00000616502 FAM84AQ96KN4 292 aa15.32■□□□□ 0.04
EPHB4-210ENST00000616502 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.32■□□□□ 0.041e-8■■□□□ 12.8
EPHB4-210ENST00000616502 PKD1L3Q7Z443 1732 aa15.32■□□□□ 0.04
EPHB4-210ENST00000616502 A0A0G2JND7 137 aa15.32■□□□□ 0.04
EPHB4-210ENST00000616502 MIF4GDA9UHW6 222 aaKnown RBP15.32■□□□□ 0.04
EPHB4-210ENST00000616502 PDXKO00764 312 aa15.32■□□□□ 0.04
EPHB4-210ENST00000616502 SNX3O60493 162 aa15.32■□□□□ 0.04
EPHB4-210ENST00000616502 TMEM253P0C7T8 217 aa15.32■□□□□ 0.04
EPHB4-210ENST00000616502 CREB1P16220 341 aa15.32■□□□□ 0.04
EPHB4-210ENST00000616502 SSTR3P32745 418 aaPredicted RBP15.32■□□□□ 0.04
EPHB4-210ENST00000616502 FMO5P49326 533 aa15.32■□□□□ 0.04
EPHB4-210ENST00000616502 PPP1R18Q6NYC8 613 aa15.32■□□□□ 0.04
EPHB4-210ENST00000616502 MICALL2Q8IY33 904 aa15.32■□□□□ 0.04
EPHB4-210ENST00000616502 ZNF564Q8TBZ8 553 aaPredicted RBP15.32■□□□□ 0.04
EPHB4-210ENST00000616502 CHURC1Q8WUH1 139 aa15.32■□□□□ 0.04
EPHB4-210ENST00000616502 SMC6Q96SB8 1091 aa15.32■□□□□ 0.04
EPHB4-210ENST00000616502 CDC42EP4Q9H3Q1 356 aaKnown RBP15.32■□□□□ 0.04
EPHB4-210ENST00000616502 PSEN1P49768 467 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms