RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 SLC44A4Q53GD3 710 aa19.64■□□□□ 0.73
TRAPPC3-209ENST00000616395 OSBPL6Q9BZF3 934 aa19.64■□□□□ 0.73
TRAPPC3-209ENST00000616395 PRKD2Q9BZL6 878 aa19.64■□□□□ 0.73
TRAPPC3-209ENST00000616395 PLEKHA4Q9H4M7 779 aa19.64■□□□□ 0.73
TRAPPC3-209ENST00000616395 RSAD1Q9HA92 442 aa19.64■□□□□ 0.73
TRAPPC3-209ENST00000616395 ZDHHC7Q9NXF8 308 aa19.64■□□□□ 0.73
TRAPPC3-209ENST00000616395 V9GY48 417 aaPredicted RBP19.64■□□□□ 0.73
TRAPPC3-209ENST00000616395 CCDC196A0A1B0GTZ2 297 aa19.63■□□□□ 0.73
TRAPPC3-209ENST00000616395 GAS2O43903 313 aaKnown RBP19.63■□□□□ 0.73
TRAPPC3-209ENST00000616395 FSHRP23945 695 aa19.63■□□□□ 0.73
TRAPPC3-209ENST00000616395 GJB2P29033 226 aa19.63■□□□□ 0.73
TRAPPC3-209ENST00000616395 RCAN1P53805 252 aa19.63■□□□□ 0.73
TRAPPC3-209ENST00000616395 CDC42EP1Q00587 391 aa19.63■□□□□ 0.73
TRAPPC3-209ENST00000616395 SETQ01105 290 aaPredicted RBP19.63■□□□□ 0.73
TRAPPC3-209ENST00000616395 TARBP2Q15633 366 aaKnown RBP19.63■□□□□ 0.73
TRAPPC3-209ENST00000616395 CATSPER4Q7RTX7 472 aa19.63■□□□□ 0.73
TRAPPC3-209ENST00000616395 RNF168Q8IYW5 571 aaPredicted RBP19.63■□□□□ 0.73
TRAPPC3-209ENST00000616395 INO80BQ9C086 356 aaPredicted RBP19.63■□□□□ 0.73
TRAPPC3-209ENST00000616395 LTB4R2Q9NPC1 389 aa19.63■□□□□ 0.73
TRAPPC3-209ENST00000616395 DISC1Q9NRI5 854 aa19.63■□□□□ 0.73
TRAPPC3-209ENST00000616395 KANSL3Q9P2N6 904 aa19.63■□□□□ 0.73
TRAPPC3-209ENST00000616395 GMEB2Q9UKD1 530 aa19.63■□□□□ 0.73
TRAPPC3-209ENST00000616395 ZFP37Q9Y6Q3 630 aaPredicted RBP19.63■□□□□ 0.73
TRAPPC3-209ENST00000616395 TGM5O43548 720 aa19.62■□□□□ 0.73
TRAPPC3-209ENST00000616395 EFEMP2O95967 443 aa19.62■□□□□ 0.73
TRAPPC3-209ENST00000616395 PDIA3P30101 505 aaKnown RBP19.62■□□□□ 0.73
TRAPPC3-209ENST00000616395 OR1G1P47890 313 aa19.62■□□□□ 0.73
TRAPPC3-209ENST00000616395 SPEM2Q0P670 501 aa19.62■□□□□ 0.73
TRAPPC3-209ENST00000616395 PRR16Q569H4 304 aa19.62■□□□□ 0.73
TRAPPC3-209ENST00000616395 MRPL10Q7Z7H8 261 aaKnown RBP19.62■□□□□ 0.73
TRAPPC3-209ENST00000616395 NECAB1Q8N987 351 aa19.62■□□□□ 0.73
TRAPPC3-209ENST00000616395 GLT8D2Q9H1C3 349 aa19.62■□□□□ 0.73
TRAPPC3-209ENST00000616395 BARHL2Q9NY43 387 aa19.62■□□□□ 0.73
TRAPPC3-209ENST00000616395 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.62■□□□□ 0.73
TRAPPC3-209ENST00000616395 BAHCC1Q9P281 2608 aa19.62■□□□□ 0.73
TRAPPC3-209ENST00000616395 TMEM150BA6NC51 233 aa19.61■□□□□ 0.73
TRAPPC3-209ENST00000616395 SLC30A4O14863 429 aa19.61■□□□□ 0.73
TRAPPC3-209ENST00000616395 DTNBO60941 627 aa19.61■□□□□ 0.73
TRAPPC3-209ENST00000616395 MAGEA9P43362 315 aa19.61■□□□□ 0.73
TRAPPC3-209ENST00000616395 DSG1Q02413 1049 aa19.61■□□□□ 0.73
TRAPPC3-209ENST00000616395 MTERF2Q49AM1 385 aa19.61■□□□□ 0.73
TRAPPC3-209ENST00000616395 ZBTB41Q5SVQ8 909 aa19.61■□□□□ 0.73
TRAPPC3-209ENST00000616395 LARP1BQ659C4 914 aaKnown RBP19.61■□□□□ 0.73
TRAPPC3-209ENST00000616395 RHPN2Q8IUC4 686 aa19.61■□□□□ 0.73
TRAPPC3-209ENST00000616395 GLYCTKQ8IVS8 523 aa19.61■□□□□ 0.73
TRAPPC3-209ENST00000616395 KSR1Q8IVT5 923 aa19.61■□□□□ 0.73
TRAPPC3-209ENST00000616395 B3GALT6Q96L58 329 aa19.61■□□□□ 0.73
TRAPPC3-209ENST00000616395 AGPAT5Q9NUQ2 364 aa19.61■□□□□ 0.73
TRAPPC3-209ENST00000616395 SUCLA2Q9P2R7 463 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC3-209ENST00000616395 CDH7Q9ULB5 785 aa19.61■□□□□ 0.73
TRAPPC3-209ENST00000616395 CNTNAP2Q9UHC6 1331 aa19.6■□□□□ 0.73
TRAPPC3-209ENST00000616395 F8W810 466 aa19.6■□□□□ 0.73
TRAPPC3-209ENST00000616395 ADAMTS3O15072 1205 aa19.6■□□□□ 0.73
TRAPPC3-209ENST00000616395 STX6O43752 255 aa19.6■□□□□ 0.73
TRAPPC3-209ENST00000616395 LARGE1O95461 756 aa19.6■□□□□ 0.73
TRAPPC3-209ENST00000616395 DNM2P50570 870 aa19.6■□□□□ 0.73
TRAPPC3-209ENST00000616395 NTHL1P78549 312 aa19.6■□□□□ 0.73
TRAPPC3-209ENST00000616395 COL9A2Q14055 689 aaPredicted RBP19.6■□□□□ 0.73
TRAPPC3-209ENST00000616395 LILRA6Q6PI73 481 aa19.6■□□□□ 0.73
TRAPPC3-209ENST00000616395 GRASPQ7Z6J2 395 aaPredicted RBP19.6■□□□□ 0.73
TRAPPC3-209ENST00000616395 ZNF410Q86VK4 478 aa19.6■□□□□ 0.73
TRAPPC3-209ENST00000616395 COLGALT2Q8IYK4 626 aa19.6■□□□□ 0.73
TRAPPC3-209ENST00000616395 NETO1Q8TDF5 533 aa19.6■□□□□ 0.73
TRAPPC3-209ENST00000616395 CLDN23Q96B33 292 aa19.6■□□□□ 0.73
TRAPPC3-209ENST00000616395 NLRP4Q96MN2 994 aa19.6■□□□□ 0.73
TRAPPC3-209ENST00000616395 CEP89Q96ST8 783 aa19.6■□□□□ 0.73
TRAPPC3-209ENST00000616395 SH2D3AQ9BRG2 576 aa19.6■□□□□ 0.73
TRAPPC3-209ENST00000616395 SEPT9Q9UHD8 586 aaPredicted RBP19.6■□□□□ 0.73
TRAPPC3-209ENST00000616395 MYH15Q9Y2K3 1946 aa19.6■□□□□ 0.73
TRAPPC3-209ENST00000616395 IGKV6-21A0A0C4DH24 114 aa19.59■□□□□ 0.73
TRAPPC3-209ENST00000616395 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.59■□□□□ 0.73
TRAPPC3-209ENST00000616395 hCG_1984214I3L0E3 225 aa19.59■□□□□ 0.73
TRAPPC3-209ENST00000616395 CHMP2AO43633 222 aa19.59■□□□□ 0.73
TRAPPC3-209ENST00000616395 ZMYND10O75800 440 aa19.59■□□□□ 0.73
TRAPPC3-209ENST00000616395 C1RP00736 705 aa19.59■□□□□ 0.73
TRAPPC3-209ENST00000616395 TARSP26639 723 aaKnown RBP19.59■□□□□ 0.73
TRAPPC3-209ENST00000616395 NTRK3Q16288 839 aa19.59■□□□□ 0.73
TRAPPC3-209ENST00000616395 LPAL2Q16609 132 aa19.59■□□□□ 0.73
TRAPPC3-209ENST00000616395 RSPO2Q6UXX9 243 aaPredicted RBP19.59■□□□□ 0.73
TRAPPC3-209ENST00000616395 ZNF713Q8N859 430 aaPredicted RBP19.59■□□□□ 0.73
TRAPPC3-209ENST00000616395 PRMT8Q9NR22 394 aaPredicted RBP19.59■□□□□ 0.73
TRAPPC3-209ENST00000616395 CHST7Q9NS84 486 aa19.59■□□□□ 0.73
TRAPPC3-209ENST00000616395 H3BQV1 296 aa19.58■□□□□ 0.73
TRAPPC3-209ENST00000616395 MCM4P33991 863 aa19.58■□□□□ 0.73
TRAPPC3-209ENST00000616395 PFKPQ01813 784 aa19.58■□□□□ 0.73
TRAPPC3-209ENST00000616395 SKOR2Q2VWA4 1001 aaPredicted RBP19.58■□□□□ 0.73
TRAPPC3-209ENST00000616395 UBXN11Q5T124 520 aa19.58■□□□□ 0.73
TRAPPC3-209ENST00000616395 CLEC17AQ6ZS10 378 aa19.58■□□□□ 0.73
TRAPPC3-209ENST00000616395 MTSS1LQ765P7 747 aa19.58■□□□□ 0.73
TRAPPC3-209ENST00000616395 WASF1Q92558 559 aa19.58■□□□□ 0.73
TRAPPC3-209ENST00000616395 FGF13Q92913 245 aa19.58■□□□□ 0.73
TRAPPC3-209ENST00000616395 LENG9Q96B70 501 aa19.58■□□□□ 0.73
TRAPPC3-209ENST00000616395 SLC26A6Q9BXS9 759 aa19.58■□□□□ 0.73
TRAPPC3-209ENST00000616395 NIFKQ9BYG3 293 aaKnown RBP19.58■□□□□ 0.73
TRAPPC3-209ENST00000616395 ZSCAN22P10073 491 aaPredicted RBP19.57■□□□□ 0.72
TRAPPC3-209ENST00000616395 RPL17P18621 184 aaKnown RBP19.57■□□□□ 0.72
TRAPPC3-209ENST00000616395 SYT1P21579 422 aa19.57■□□□□ 0.72
TRAPPC3-209ENST00000616395 KCNA4P22459 653 aa19.57■□□□□ 0.72
TRAPPC3-209ENST00000616395 SCRN1Q12765 414 aa19.57■□□□□ 0.72
TRAPPC3-209ENST00000616395 PFKFB3Q16875 520 aaPredicted RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms