RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 GOLGA8JA6NMD2 632 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 GOLGA8RI6L899 631 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 CES2O00748 559 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 CETPP11597 493 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 CHRNA3P32297 505 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 COILP38432 576 aaPredicted RBP14.08□□□□□ -0.16
MSH6-214ENST00000616033 TBC1D25Q3MII6 688 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 LRRC37BQ96QE4 947 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 KLF6Q99612 283 aaPredicted RBP14.08□□□□□ -0.16
MSH6-214ENST00000616033 RXFP1Q9HBX9 757 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 CHST7Q9NS84 486 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 RHBDL2Q9NX52 303 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 TMEM253P0C7T8 217 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 ZBTB48P10074 688 aaPredicted RBP14.08□□□□□ -0.16
MSH6-214ENST00000616033 PTGIRP43119 386 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 FMO5P49326 533 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 ITGA8P53708 1063 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 RIPK1Q13546 671 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 SLMAPQ14BN4 828 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 EPM2AIP1Q7L775 607 aaPredicted RBP14.08□□□□□ -0.16
MSH6-214ENST00000616033 MYLK4Q86YV6 388 aaPredicted RBP14.08□□□□□ -0.16
MSH6-214ENST00000616033 EIF1ADQ8N9N8 165 aaKnown RBP14.08□□□□□ -0.16
MSH6-214ENST00000616033 CNBD1Q8NA66 436 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 NEDD1Q8NHV4 660 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 TXLNGYQ9BZA5 131 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 INTS2Q9H0H0 1204 aaKnown RBP14.08□□□□□ -0.16
MSH6-214ENST00000616033 KLHL11Q9NVR0 708 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 BCORQ6W2J9 1755 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 MYO3BQ8WXR4 1341 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 KDM3AQ9Y4C1 1321 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 RARGP13631 454 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 FOXN2P32314 431 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 PAPOLAP51003 745 aaKnown RBP14.08□□□□□ -0.16
MSH6-214ENST00000616033 MYL7Q01449 175 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 BLMHQ13867 455 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 KAZNQ674X7 775 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 HOMEZQ8IX15 550 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 UTP4Q969X6 686 aaKnown RBP14.08□□□□□ -0.16
MSH6-214ENST00000616033 CCDC127Q96BQ5 260 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 SYT15Q9BQS2 421 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 FRMD4BQ9Y2L6 1034 aa14.08□□□□□ -0.16
MSH6-214ENST00000616033 ASTN1O14525 1302 aa14.07□□□□□ -0.16
MSH6-214ENST00000616033 GOLGA8SH3BPF8 625 aa14.07□□□□□ -0.16
MSH6-214ENST00000616033 GOLGA8MH3BSY2 632 aa14.07□□□□□ -0.16
MSH6-214ENST00000616033 RIMBP2O15034 1052 aa14.07□□□□□ -0.16
MSH6-214ENST00000616033 DLG4P78352 724 aa14.07□□□□□ -0.16
MSH6-214ENST00000616033 RRP1BQ14684 758 aaKnown RBP14.07□□□□□ -0.16
MSH6-214ENST00000616033 EDRF1Q3B7T1 1238 aa14.07□□□□□ -0.16
MSH6-214ENST00000616033 CDCA2Q69YH5 1023 aaPredicted RBP14.07□□□□□ -0.16
MSH6-214ENST00000616033 ANO7Q6IWH7 933 aa14.07□□□□□ -0.16
MSH6-214ENST00000616033 ISLR2Q6UXK2 745 aa14.07□□□□□ -0.16
MSH6-214ENST00000616033 ZNF653Q96CK0 615 aa14.07□□□□□ -0.16
MSH6-214ENST00000616033 SETDB2Q96T68 719 aa14.07□□□□□ -0.16
MSH6-214ENST00000616033 NAALADL1Q9UQQ1 740 aa14.07□□□□□ -0.16
MSH6-214ENST00000616033 NUP98P52948 1817 aa14.07□□□□□ -0.16
MSH6-214ENST00000616033 GM2AP17900 193 aa14.07□□□□□ -0.16
MSH6-214ENST00000616033 PSMC2P35998 433 aaKnown RBP14.07□□□□□ -0.16
MSH6-214ENST00000616033 RCN2Q14257 317 aa14.07□□□□□ -0.16
MSH6-214ENST00000616033 SEPT7Q16181 437 aaKnown RBP14.07□□□□□ -0.16
MSH6-214ENST00000616033 PHLDB3Q6NSJ2 640 aa14.07□□□□□ -0.16
MSH6-214ENST00000616033 HS2ST1Q7LGA3 356 aa14.07□□□□□ -0.16
MSH6-214ENST00000616033 SCYL3Q8IZE3 742 aa14.07□□□□□ -0.16
MSH6-214ENST00000616033 EPAS1Q99814 870 aa14.07□□□□□ -0.16
MSH6-214ENST00000616033 CDCA7Q9BWT1 371 aaPredicted RBP14.07□□□□□ -0.16
MSH6-214ENST00000616033 NPHS2Q9NP85 383 aa14.07□□□□□ -0.16
MSH6-214ENST00000616033 ARHGEF3Q9NR81 526 aa14.07□□□□□ -0.16
MSH6-214ENST00000616033 ANAPC5Q9UJX4 755 aa14.07□□□□□ -0.16
MSH6-214ENST00000616033 CHRNB2P17787 502 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 PRKCIP41743 596 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 CPA2P48052 419 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 SLC12A3P55017 1021 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 TCP10Q12799 353 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 MIGA2Q7L4E1 593 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 RAB3IPQ96QF0 476 aaPredicted RBP14.06□□□□□ -0.16
MSH6-214ENST00000616033 AGPAT1Q99943 283 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 NUP85Q9BW27 656 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 ANO3Q9BYT9 981 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 TYW1Q9NV66 732 aaKnown RBP14.06□□□□□ -0.16
MSH6-214ENST00000616033 RABGAP1Q9Y3P9 1069 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 C2CD2Q9Y426 696 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 SYNGAP1Q96PV0 1343 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 KAT6AQ92794 2004 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 A0A0G2JND7 137 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 ANKRD62A6NC57 917 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 PODXLO00592 558 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 CYP26A1O43174 497 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 SGPL1O95470 568 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 UBTFL6P0CB48 400 aaPredicted RBP14.06□□□□□ -0.16
MSH6-214ENST00000616033 ZCCHC18P0CG32 403 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 EEF2P13639 858 aaKnown RBP14.06□□□□□ -0.16
MSH6-214ENST00000616033 PTDSS1P48651 473 aaKnown RBP14.06□□□□□ -0.16
MSH6-214ENST00000616033 SCNN1DP51172 638 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 CACNB3P54284 484 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 PPATQ06203 517 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 MFSD14BQ5SR56 506 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 CGB2Q6NT52 195 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 FAM13CQ8NE31 585 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 TBC1D16Q8TBP0 767 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 HAUS1Q96CS2 278 aa14.06□□□□□ -0.16
MSH6-214ENST00000616033 ZSWIM1Q9BR11 485 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms