RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 UBE2Q2Q8WVN8 375 aa3.6□□□□□ -1.83
HMGB1P24-202ENST00000615653 SLC5A5Q92911 643 aa3.6□□□□□ -1.83
HMGB1P24-202ENST00000615653 ARL8AQ96BM9 186 aa3.6□□□□□ -1.83
HMGB1P24-202ENST00000615653 SOX7Q9BT81 388 aa3.6□□□□□ -1.83
HMGB1P24-202ENST00000615653 IFT22Q9H7X7 185 aa3.6□□□□□ -1.83
HMGB1P24-202ENST00000615653 EMC7Q9NPA0 242 aa3.6□□□□□ -1.83
HMGB1P24-202ENST00000615653 KCNG1Q9UIX4 513 aa3.6□□□□□ -1.83
HMGB1P24-202ENST00000615653 COL11A2P13942 1736 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P24-202ENST00000615653 TLDC2A0PJX2 215 aa3.59□□□□□ -1.83
HMGB1P24-202ENST00000615653 UBE2QL1A1L167 161 aa3.59□□□□□ -1.83
HMGB1P24-202ENST00000615653 DNAJC9-AS1A6NH13 148 aa3.59□□□□□ -1.83
HMGB1P24-202ENST00000615653 KCNAB3O43448 404 aa3.59□□□□□ -1.83
HMGB1P24-202ENST00000615653 RAB11FIP3O75154 756 aa3.59□□□□□ -1.83
HMGB1P24-202ENST00000615653 PPFIA4O75335 1185 aa3.59□□□□□ -1.83
HMGB1P24-202ENST00000615653 STAT3P40763 770 aa3.59□□□□□ -1.83
HMGB1P24-202ENST00000615653 MANFP55145 182 aaKnown RBP3.59□□□□□ -1.83
HMGB1P24-202ENST00000615653 NPEPPSP55786 919 aa3.59□□□□□ -1.83
HMGB1P24-202ENST00000615653 SESN3P58005 492 aa3.59□□□□□ -1.83
HMGB1P24-202ENST00000615653 ELAVL1Q15717 326 aaKnown RBP3.59□□□□□ -1.83
HMGB1P24-202ENST00000615653 ATP13A4Q4VNC1 1196 aa3.59□□□□□ -1.83
HMGB1P24-202ENST00000615653 FKBP15Q5T1M5 1219 aa3.59□□□□□ -1.83
HMGB1P24-202ENST00000615653 GJC2Q5T442 439 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P24-202ENST00000615653 KCNV1Q6PIU1 500 aa3.59□□□□□ -1.83
HMGB1P24-202ENST00000615653 LRRC55Q6ZSA7 311 aa3.59□□□□□ -1.83
HMGB1P24-202ENST00000615653 HTR3DQ70Z44 454 aa3.59□□□□□ -1.83
HMGB1P24-202ENST00000615653 RNF180Q86T96 592 aa3.59□□□□□ -1.83
HMGB1P24-202ENST00000615653 SRRM1Q8IYB3 904 aaKnown RBP3.59□□□□□ -1.83
HMGB1P24-202ENST00000615653 FAM9AQ8IZU1 332 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P24-202ENST00000615653 LEO1Q8WVC0 666 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P24-202ENST00000615653 ZNF496Q96IT1 587 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P24-202ENST00000615653 ACAP3Q96P50 834 aa3.59□□□□□ -1.83
HMGB1P24-202ENST00000615653 PDCD2LQ9BRP1 358 aa3.59□□□□□ -1.83
HMGB1P24-202ENST00000615653 C1QTNF7Q9BXJ2 289 aa3.59□□□□□ -1.83
HMGB1P24-202ENST00000615653 INSL6Q9Y581 213 aa3.59□□□□□ -1.83
HMGB1P24-202ENST00000615653 PPP2R3BQ9Y5P8 575 aa3.59□□□□□ -1.83
HMGB1P24-202ENST00000615653 ARID4BQ4LE39 1312 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P24-202ENST00000615653 ARHGEF17Q96PE2 2063 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P24-202ENST00000615653 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P24-202ENST00000615653 GOLGA6L6A8MZA4 724 aa3.58□□□□□ -1.84
HMGB1P24-202ENST00000615653 MFAP3LO75121 409 aa3.58□□□□□ -1.84
HMGB1P24-202ENST00000615653 ALDH1A2O94788 518 aa3.58□□□□□ -1.84
HMGB1P24-202ENST00000615653 CLSTN1O94985 981 aa3.58□□□□□ -1.84
HMGB1P24-202ENST00000615653 C1RP00736 705 aa3.58□□□□□ -1.84
HMGB1P24-202ENST00000615653 CPEP16870 476 aa3.58□□□□□ -1.84
HMGB1P24-202ENST00000615653 GYS2P54840 703 aa3.58□□□□□ -1.84
HMGB1P24-202ENST00000615653 PPARAQ07869 468 aa3.58□□□□□ -1.84
HMGB1P24-202ENST00000615653 METTL24Q5JXM2 366 aa3.58□□□□□ -1.84
HMGB1P24-202ENST00000615653 BROXQ5VW32 411 aa3.58□□□□□ -1.84
HMGB1P24-202ENST00000615653 SDE2Q6IQ49 451 aa3.58□□□□□ -1.84
HMGB1P24-202ENST00000615653 LMBR1LQ6UX01 489 aa3.58□□□□□ -1.84
HMGB1P24-202ENST00000615653 DDX46Q7L014 1031 aaKnown RBP3.58□□□□□ -1.84
HMGB1P24-202ENST00000615653 TAS1R1Q7RTX1 841 aa3.58□□□□□ -1.84
HMGB1P24-202ENST00000615653 RASSF3Q86WH2 238 aa3.58□□□□□ -1.84
HMGB1P24-202ENST00000615653 THNSL2Q86YJ6 484 aa3.58□□□□□ -1.84
HMGB1P24-202ENST00000615653 MDGA1Q8NFP4 955 aa3.58□□□□□ -1.84
HMGB1P24-202ENST00000615653 OR14C36Q8NHC7 312 aa3.58□□□□□ -1.84
HMGB1P24-202ENST00000615653 CHAC2Q8WUX2 184 aa3.58□□□□□ -1.84
HMGB1P24-202ENST00000615653 GAB3Q8WWW8 586 aa3.58□□□□□ -1.84
HMGB1P24-202ENST00000615653 TTC1Q99614 292 aa3.58□□□□□ -1.84
HMGB1P24-202ENST00000615653 CAAP1Q9H8G2 361 aa3.58□□□□□ -1.84
HMGB1P24-202ENST00000615653 RSAD1Q9HA92 442 aa3.58□□□□□ -1.84
HMGB1P24-202ENST00000615653 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.58□□□□□ -1.84
HMGB1P24-202ENST00000615653 NOC2LQ9Y3T9 749 aaKnown RBP3.58□□□□□ -1.84
HMGB1P24-202ENST00000615653 A0A1W2PR48 441 aa3.57□□□□□ -1.84
HMGB1P24-202ENST00000615653 PRSS38A1L453 326 aa3.57□□□□□ -1.84
HMGB1P24-202ENST00000615653 BRINP1O60477 761 aa3.57□□□□□ -1.84
HMGB1P24-202ENST00000615653 LY86O95711 162 aa3.57□□□□□ -1.84
HMGB1P24-202ENST00000615653 LTA4HP09960 611 aaKnown RBP3.57□□□□□ -1.84
HMGB1P24-202ENST00000615653 GNAT2P19087 354 aa3.57□□□□□ -1.84
HMGB1P24-202ENST00000615653 ELLP55199 621 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P24-202ENST00000615653 FAPQ12884 760 aa3.57□□□□□ -1.84
HMGB1P24-202ENST00000615653 NAIF1Q69YI7 327 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P24-202ENST00000615653 SP5Q6BEB4 398 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P24-202ENST00000615653 Q6YL49 198 aa3.57□□□□□ -1.84
HMGB1P24-202ENST00000615653 GSPT2Q8IYD1 628 aaKnown RBP3.57□□□□□ -1.84
HMGB1P24-202ENST00000615653 PIK3C3Q8NEB9 887 aa3.57□□□□□ -1.84
HMGB1P24-202ENST00000615653 ZNF512Q96ME7 567 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P24-202ENST00000615653 GPR87Q9BY21 358 aa3.57□□□□□ -1.84
HMGB1P24-202ENST00000615653 ENKD1Q9H0I2 346 aa3.57□□□□□ -1.84
HMGB1P24-202ENST00000615653 CYP4F11Q9HBI6 524 aa3.57□□□□□ -1.84
HMGB1P24-202ENST00000615653 BCCIPQ9P287 314 aaKnown RBP eCLIP3.57□□□□□ -1.84
HMGB1P24-202ENST00000615653 NCDNQ9UBB6 729 aa3.57□□□□□ -1.84
HMGB1P24-202ENST00000615653 PRSS50Q9UI38 385 aa3.57□□□□□ -1.84
HMGB1P24-202ENST00000615653 USP18Q9UMW8 372 aa3.57□□□□□ -1.84
HMGB1P24-202ENST00000615653 KLRG2A4D1S0 409 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P24-202ENST00000615653 GYPEP15421 78 aa3.56□□□□□ -1.84
HMGB1P24-202ENST00000615653 RABGGTBP53611 331 aa3.56□□□□□ -1.84
HMGB1P24-202ENST00000615653 DUSP2Q05923 314 aa3.56□□□□□ -1.84
HMGB1P24-202ENST00000615653 MGAT5Q09328 741 aa3.56□□□□□ -1.84
HMGB1P24-202ENST00000615653 ACAP1Q15027 740 aa3.56□□□□□ -1.84
HMGB1P24-202ENST00000615653 CRELD2Q6UXH1 353 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P24-202ENST00000615653 DOK3Q7L591 496 aa3.56□□□□□ -1.84
HMGB1P24-202ENST00000615653 GLB1L3Q8NCI6 653 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P24-202ENST00000615653 ST8SIA2Q92186 375 aa3.56□□□□□ -1.84
HMGB1P24-202ENST00000615653 IL17RAQ96F46 866 aa3.56□□□□□ -1.84
HMGB1P24-202ENST00000615653 RAX2Q96IS3 184 aa3.56□□□□□ -1.84
HMGB1P24-202ENST00000615653 PSMD1Q99460 953 aa3.56□□□□□ -1.84
HMGB1P24-202ENST00000615653 FDXACB1Q9BRP7 624 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P24-202ENST00000615653 LRFN3Q9BTN0 628 aa3.56□□□□□ -1.84
HMGB1P24-202ENST00000615653 TMPRSS11EQ9UL52 423 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms