RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 TAAR1Q96RJ0 339 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 PLEKHA5Q9HAU0 1116 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 KIAA1257Q9ULG3 409 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 ATRNO75882 1429 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 MNAT1P51948 309 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 RPS6P62753 249 aaKnown RBP10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 NBPF9Q3BBW0 867 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 WNK4Q96J92 1243 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 C7orf25Q9BPX7 421 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 FTHL17Q9BXU8 183 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 CATSPERBQ9H7T0 1116 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 SNAP23O00161 211 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 TDP2O95551 362 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 ADORA2BP29275 332 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 HARS2P49590 506 aaKnown RBP10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 YWHAGP61981 247 aaKnown RBP eCLIP10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 MFSD10Q14728 455 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 SDCCAG8Q86SQ7 713 aaPredicted RBP10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 HERC6Q8IVU3 1022 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 CCDC13Q8IYE1 715 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 GPATCH11Q8N954 259 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 FAM133AQ8N9E0 248 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 SKA1Q96BD8 255 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 MKNK1Q9BUB5 465 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 CALN1Q9BXU9 219 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 UXTQ9UBK9 157 aaPredicted RBP10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 MAD2L2Q9UI95 211 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 TRPV2Q9Y5S1 764 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 USH1CQ9Y6N9 552 aa10.38□□□□□ -0.75
TNFRSF9-204ENST00000615230 COL3A1P02461 1466 aaPredicted RBP10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 PGRMC1O00264 195 aaKnown RBP10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 GTF2H1P32780 548 aa10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 ATP6V0D2Q8N8Y2 350 aa10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 IGDCC4Q8TDY8 1250 aa10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 ASIC4Q96FT7 647 aa10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 AGBL1Q96MI9 1066 aa10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 KCNH7Q9NS40 1196 aa10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 CALCOCO1Q9P1Z2 691 aa10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 NFU1Q9UMS0 254 aa10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 LRRN2O75325 713 aa10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 NPTXRO95502 500 aa10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 IKBKEQ14164 716 aa10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 ZNF235Q14590 738 aa10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 RAPH1Q70E73 1250 aa10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 SMIM5Q71RC9 77 aa10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 NT5DC4Q86YG4 428 aa10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 EMSYQ7Z589 1322 aa10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 LRRD1A4D1F6 860 aa10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 ADM5C9JUS6 153 aa10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 CDC27P30260 824 aa10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 SLMAPQ14BN4 828 aa10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 PRAMEF18Q5VWM3 479 aa10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 ZNF280DQ6N043 979 aa10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 WDR18Q9BV38 432 aa10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 ASCC2Q9H1I8 757 aaPredicted RBP10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 HSPBP1Q9NZL4 362 aa10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 AGAP1Q9UPQ3 857 aa10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 FOXP2O15409 715 aa10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 RNASEH1O60930 286 aaKnown RBP10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 FGF19O95750 216 aa10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 MAPTP10636 758 aaKnown RBP10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 LHX1P48742 406 aa10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 IRX4P78413 519 aa10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 MRPS31Q92665 395 aaKnown RBP10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 PPP2R2CQ9Y2T4 447 aa10.37□□□□□ -0.75
TNFRSF9-204ENST00000615230 RGS16O15492 202 aaPredicted RBP10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 ATICP31939 592 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 STX1BP61266 288 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 PDE1BQ01064 536 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 PPP2R5CQ13362 524 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 EFHC1Q5JVL4 640 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 B4GALNT4Q76KP1 1039 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 ATP6V1E2Q96A05 226 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 HDAC11Q96DB2 347 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 FOPNLQ96NB1 174 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 SLC7A5P2Q9GIP4 190 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 DRC3Q9H069 523 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 MAGED2Q9UNF1 606 aaPredicted RBP10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 GOLGA8KD6RF30 607 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 RPA1P27694 616 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 SREBF1P36956 1147 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 NOP14P78316 857 aaKnown RBP10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 SEPT6Q14141 434 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 ACCSLQ4AC99 568 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 TRIM54Q9BYV2 358 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 PPP1R12CQ9BZL4 782 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 DBR1Q9UK59 544 aaKnown RBP10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 CNTNAP5Q8WYK1 1306 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 SULT1E1P49888 294 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 C4orf22Q6V702 233 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 MICALL1Q8N3F8 863 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 HSPH1Q92598 858 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 EPSTI1Q96J88 318 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 SEPT5Q99719 369 aaPredicted RBP10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 RNF208Q9H0X6 261 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 OLFML3Q9NRN5 406 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 BUB1O43683 1085 aa10.36□□□□□ -0.75
TNFRSF9-204ENST00000615230 RNF40O75150 1001 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms