RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 MYL5Q02045 173 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 MYO1EQ12965 1108 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 NFIL3Q16649 462 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 DPCR1Q3MIW9 517 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 OLFML2BQ68BL8 750 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 NCAPH2Q6IBW4 605 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 PDILTQ8N807 584 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 GOLGA1Q92805 767 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 HVCN1Q96D96 273 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 CREBZFQ9NS37 354 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 BMP2KQ9NSY1 1161 aaPredicted RBP9.49□□□□□ -0.89
VPS11-206ENST00000614944 PCMTD2Q9NV79 361 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 KDM1AO60341 852 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 HOXD12P35452 270 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 PSMC5P62195 406 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 BMT2Q1RMZ1 405 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.49□□□□□ -0.89
VPS11-206ENST00000614944 NEK10Q6ZWH5 1172 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 MIER3Q7Z3K6 550 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 PLEKHH3Q7Z736 793 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 ZC3H3Q8IXZ2 948 aaKnown RBP9.49□□□□□ -0.89
VPS11-206ENST00000614944 ADSSL1Q8N142 457 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 RASSF8Q8NHQ8 419 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 DNAJC25Q9H1X3 360 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 SYNCQ9H7C4 482 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 EBF2Q9HAK2 575 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 WDR35Q9P2L0 1181 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 CFAP69A5D8W1 941 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 MYMKA6NI61 221 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 PFDN1O60925 122 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 LGR5O75473 907 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 LUC7L3O95232 432 aaKnown RBP9.49□□□□□ -0.89
VPS11-206ENST00000614944 PSAPP07602 524 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 HOXD8P13378 290 aaPredicted RBP9.49□□□□□ -0.89
VPS11-206ENST00000614944 QARSP47897 775 aaKnown RBP9.49□□□□□ -0.89
VPS11-206ENST00000614944 PDE4DQ08499 809 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 CCDC62Q6P9F0 684 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 ABHD15Q6UXT9 468 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 RSRC2Q7L4I2 434 aaKnown RBP9.49□□□□□ -0.89
VPS11-206ENST00000614944 SOCS4Q8WXH5 440 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 NR1H4Q96RI1 486 aaPredicted RBP9.49□□□□□ -0.89
VPS11-206ENST00000614944 KATNBL1Q9H079 304 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 ZFYVE28Q9HCC9 887 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 OLFML3Q9NRN5 406 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 TMCO1Q9UM00 188 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 KIAA1024Q9UPX6 916 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 C15orf41Q9Y2V0 281 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 SAMM50Q9Y512 469 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 PCDHA2Q9Y5H9 948 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 PCDHA10Q9Y5I2 948 aa9.49□□□□□ -0.89
VPS11-206ENST00000614944 ANKRD62A6NC57 917 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 BECN2A8MW95 431 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 MGRN1O60291 552 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 MTRF1O75570 445 aaKnown RBP9.48□□□□□ -0.89
VPS11-206ENST00000614944 ALDH3A1P30838 453 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 RTP1P59025 263 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 ALCAMQ13740 583 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 ARID5BQ14865 1188 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 KCNK18Q7Z418 384 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 FUKQ8N0W3 1084 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 GUF1Q8N442 669 aaKnown RBP9.48□□□□□ -0.89
VPS11-206ENST00000614944 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.48□□□□□ -0.89
VPS11-206ENST00000614944 ST6GALNAC4Q9H4F1 302 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 JPH1Q9HDC5 661 aaPredicted RBP9.48□□□□□ -0.89
VPS11-206ENST00000614944 C6orf203Q9P0P8 240 aaPredicted RBP9.48□□□□□ -0.89
VPS11-206ENST00000614944 ZMAT5Q9UDW3 170 aaKnown RBP9.48□□□□□ -0.89
VPS11-206ENST00000614944 L1RE1Q9UN81 338 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 MAFBQ9Y5Q3 323 aaPredicted RBP9.48□□□□□ -0.89
VPS11-206ENST00000614944 COMMD10Q9Y6G5 202 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 EMSYQ7Z589 1322 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 POTEB3A0JP26 581 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 LRRD1A4D1F6 860 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 IGF2BP3O00425 579 aaKnown RBP eCLIP9.48□□□□□ -0.89
VPS11-206ENST00000614944 CA12O43570 354 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 TROVE2P10155 538 aaKnown RBP eCLIP9.48□□□□□ -0.89
VPS11-206ENST00000614944 ZNF18P17022 549 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 SLC26A2P50443 739 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 NKX3-2P78367 333 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 NOGQ13253 232 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 STIM1Q13586 685 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 SPATA1Q5VX52 437 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 POTEBQ6S5H4 581 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 C1orf186Q6ZWK4 172 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 GPR142Q7Z601 462 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 LRRC49Q8IUZ0 686 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 ATP6V0A1Q93050 837 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 PAGR1Q9BTK6 254 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 C17orf75Q9HAS0 396 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 SLC9A2Q9UBY0 812 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 SSX2IPQ9Y2D8 614 aa9.48□□□□□ -0.89
VPS11-206ENST00000614944 EIF3DO15371 548 aaKnown RBP eCLIP9.47□□□□□ -0.89
VPS11-206ENST00000614944 STBD1O95210 358 aa9.47□□□□□ -0.89
VPS11-206ENST00000614944 CYP2C8P10632 490 aa9.47□□□□□ -0.89
VPS11-206ENST00000614944 IDO1P14902 403 aa9.47□□□□□ -0.89
VPS11-206ENST00000614944 CDC25AP30304 524 aa9.47□□□□□ -0.89
VPS11-206ENST00000614944 AFMP43652 599 aa9.47□□□□□ -0.89
VPS11-206ENST00000614944 SH3BGRP55822 239 aaPredicted RBP9.47□□□□□ -0.89
VPS11-206ENST00000614944 SNRPFP62306 86 aaKnown RBP9.47□□□□□ -0.89
VPS11-206ENST00000614944 MXRA7P84157 204 aa9.47□□□□□ -0.89
VPS11-206ENST00000614944 PPP2R3AQ06190 1150 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms