RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 GPR62Q9BZJ7 368 aa6.28□□□□□ -1.4
CPNE3-208ENST00000614678 RSAD1Q9HA92 442 aa6.28□□□□□ -1.4
CPNE3-208ENST00000614678 KMT5AQ9NQR1 393 aa6.28□□□□□ -1.4
CPNE3-208ENST00000614678 RALGAPA2Q2PPJ7 1873 aa6.28□□□□□ -1.4
CPNE3-208ENST00000614678 LAD1O00515 517 aa6.28□□□□□ -1.4
CPNE3-208ENST00000614678 PPEF2O14830 753 aa6.28□□□□□ -1.4
CPNE3-208ENST00000614678 POLR2DO15514 142 aaKnown RBP6.28□□□□□ -1.4
CPNE3-208ENST00000614678 EFCAB14O75071 495 aa6.28□□□□□ -1.4
CPNE3-208ENST00000614678 PRR29P0C7W0 189 aa6.28□□□□□ -1.4
CPNE3-208ENST00000614678 XRCC6P12956 609 aaKnown RBP eCLIP6.28□□□□□ -1.4
CPNE3-208ENST00000614678 DDIT3P35638 169 aa6.28□□□□□ -1.4
CPNE3-208ENST00000614678 NOMO2Q5JPE7 1267 aa6.28□□□□□ -1.4
CPNE3-208ENST00000614678 ODR4Q5SWX8 454 aa6.28□□□□□ -1.4
CPNE3-208ENST00000614678 CMTR2Q8IYT2 770 aaKnown RBP6.28□□□□□ -1.4
CPNE3-208ENST00000614678 MYCT1Q8N699 235 aa6.28□□□□□ -1.4
CPNE3-208ENST00000614678 KRI1Q8N9T8 703 aaKnown RBP6.28□□□□□ -1.4
CPNE3-208ENST00000614678 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.28□□□□□ -1.4
CPNE3-208ENST00000614678 EEF2KMTQ96G04 330 aa6.28□□□□□ -1.4
CPNE3-208ENST00000614678 CDK5RAP3Q96JB5 506 aa6.28□□□□□ -1.4
CPNE3-208ENST00000614678 CDT1Q9H211 546 aa6.28□□□□□ -1.4
CPNE3-208ENST00000614678 CLDND1Q9NY35 253 aa6.28□□□□□ -1.4
CPNE3-208ENST00000614678 MYO10Q9HD67 2058 aa6.28□□□□□ -1.4
CPNE3-208ENST00000614678 C5orf67F2Z3F1 127 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 K7ERI5 159 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 NRP1O14786 923 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 HOXD13P35453 343 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 NAMPTP43490 491 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 ME1P48163 572 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 RNASELQ05823 741 aaKnown RBP6.27□□□□□ -1.41
CPNE3-208ENST00000614678 TMEM132AQ24JP5 1023 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 IFNLR1Q8IU57 520 aaPredicted RBP6.27□□□□□ -1.41
CPNE3-208ENST00000614678 ABI1Q8IZP0 508 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 MCPH1Q8NEM0 835 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 MRPL38Q96DV4 380 aaKnown RBP6.27□□□□□ -1.41
CPNE3-208ENST00000614678 ACO2Q99798 780 aaKnown RBP6.27□□□□□ -1.41
CPNE3-208ENST00000614678 TCF25Q9BQ70 676 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 TMEM117Q9H0C3 514 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 PTPRHQ9HD43 1115 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 TMEM265A0A087WTH1 108 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 ADAM12O43184 909 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 DKC1O60832 514 aaKnown RBP eCLIP6.27□□□□□ -1.41
CPNE3-208ENST00000614678 STAG3L1P0CL83 205 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 MAPTP10636 758 aaKnown RBP6.27□□□□□ -1.41
CPNE3-208ENST00000614678 IDEP14735 1019 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 LONP1P36776 959 aaKnown RBP6.27□□□□□ -1.41
CPNE3-208ENST00000614678 OR1G1P47890 313 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 ORC2Q13416 577 aaPredicted RBP6.27□□□□□ -1.41
CPNE3-208ENST00000614678 CUL4BQ13620 913 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 ATF7IP2Q5U623 682 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 NOTUMQ6P988 496 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 CD300LGQ6UXG3 332 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 LEO1Q8WVC0 666 aaPredicted RBP6.27□□□□□ -1.41
CPNE3-208ENST00000614678 TRIM6Q9C030 488 aaPredicted RBP6.27□□□□□ -1.41
CPNE3-208ENST00000614678 C1orf112Q9NSG2 853 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 CLEC1BQ9P126 229 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 CNTNAP2Q9UHC6 1331 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 ACKR2O00590 384 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 CXCL8P10145 99 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 ITGA4P13612 1032 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 ADSSP30520 456 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 ACOT2P49753 483 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 MAPK6Q16659 721 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 RRAGBQ5VZM2 374 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 SLC27A1Q6PCB7 646 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 RSPO2Q6UXX9 243 aaPredicted RBP6.27□□□□□ -1.41
CPNE3-208ENST00000614678 HAUS6Q7Z4H7 955 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 MRPL10Q7Z7H8 261 aaKnown RBP6.27□□□□□ -1.41
CPNE3-208ENST00000614678 COLGALT2Q8IYK4 626 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 SLC39A11Q8N1S5 342 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 CCSER1Q9C0I3 900 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 DACT1Q9NYF0 836 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 SERTAD1Q9UHV2 236 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 SCN1AP35498 2009 aa6.27□□□□□ -1.41
CPNE3-208ENST00000614678 GOLGA8IPA6NC78 632 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 GOLGA8JA6NMD2 632 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 NRG2O14511 850 aaPredicted RBP6.26□□□□□ -1.41
CPNE3-208ENST00000614678 ZNF623O75123 536 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 GADD45BO75293 160 aaPredicted RBP6.26□□□□□ -1.41
CPNE3-208ENST00000614678 PRPF6O94906 941 aaKnown RBP6.26□□□□□ -1.41
CPNE3-208ENST00000614678 KIF4AO95239 1232 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 PLS3P13797 630 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 BRCC3P46736 316 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 NDUFA8P51970 172 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 DMP1Q13316 513 aaPredicted RBP6.26□□□□□ -1.41
CPNE3-208ENST00000614678 PRSS55Q6UWB4 352 aaPredicted RBP6.26□□□□□ -1.41
CPNE3-208ENST00000614678 VPS52Q8N1B4 723 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 RAB34Q9BZG1 259 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 TUBGCP4Q9UGJ1 667 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 CITO14578 2027 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 K7ENM7 598 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 FAM189A1O60320 539 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 BMP1P13497 986 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 GUCY2CP25092 1073 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 CLCNKBP51801 687 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 TFDP1Q14186 410 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 LMBRD2Q68DH5 695 aaPredicted RBP6.26□□□□□ -1.41
CPNE3-208ENST00000614678 SAAL1Q96ER3 474 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 CALML4Q96GE6 196 aa6.26□□□□□ -1.41
CPNE3-208ENST00000614678 JPH2Q9BR39 696 aaPredicted RBP6.26□□□□□ -1.41
CPNE3-208ENST00000614678 SMOC2Q9H3U7 446 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms