RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 ITKQ08881 620 aa6.82□□□□□ -1.32
SCAMP1-205ENST00000614488 CRIP3Q6Q6R5 217 aa6.82□□□□□ -1.32
SCAMP1-205ENST00000614488 FAM177A1Q8N128 213 aaPredicted RBP6.82□□□□□ -1.32
SCAMP1-205ENST00000614488 OR7D4Q8NG98 312 aa6.82□□□□□ -1.32
SCAMP1-205ENST00000614488 OR52N2Q8NGI0 321 aa6.82□□□□□ -1.32
SCAMP1-205ENST00000614488 HOXB13Q92826 284 aaPredicted RBP6.82□□□□□ -1.32
SCAMP1-205ENST00000614488 MTMR8Q96EF0 704 aa6.82□□□□□ -1.32
SCAMP1-205ENST00000614488 ZNF503Q96F45 646 aa6.82□□□□□ -1.32
SCAMP1-205ENST00000614488 MNTQ99583 582 aa6.82□□□□□ -1.32
SCAMP1-205ENST00000614488 CPPED1Q9BRF8 314 aaPredicted RBP6.82□□□□□ -1.32
SCAMP1-205ENST00000614488 ADI1Q9BV57 179 aa6.82□□□□□ -1.32
SCAMP1-205ENST00000614488 ZNF747Q9BV97 191 aa6.82□□□□□ -1.32
SCAMP1-205ENST00000614488 LSM14BQ9BX40 385 aaKnown RBP6.82□□□□□ -1.32
SCAMP1-205ENST00000614488 RBP3P10745 1247 aa6.81□□□□□ -1.32
SCAMP1-205ENST00000614488 FLT3LGP49771 235 aa6.81□□□□□ -1.32
SCAMP1-205ENST00000614488 MGAT2Q10469 447 aa6.81□□□□□ -1.32
SCAMP1-205ENST00000614488 PRAMEF14Q5SWL7 426 aa6.81□□□□□ -1.32
SCAMP1-205ENST00000614488 GPRIN1Q7Z2K8 1008 aa6.81□□□□□ -1.32
SCAMP1-205ENST00000614488 MDM1Q8TC05 714 aa6.81□□□□□ -1.32
SCAMP1-205ENST00000614488 CACTINQ8WUQ7 758 aaKnown RBP6.81□□□□□ -1.32
SCAMP1-205ENST00000614488 PARPBPQ9NWS1 579 aa6.81□□□□□ -1.32
SCAMP1-205ENST00000614488 MKS1Q9NXB0 559 aa6.81□□□□□ -1.32
SCAMP1-205ENST00000614488 CEP72Q9P209 647 aa6.81□□□□□ -1.32
SCAMP1-205ENST00000614488 XDHP47989 1333 aa6.8□□□□□ -1.32
SCAMP1-205ENST00000614488 SHTN1A0MZ66 631 aa6.8□□□□□ -1.32
SCAMP1-205ENST00000614488 FAM171A2A8MVW0 826 aa6.8□□□□□ -1.32
SCAMP1-205ENST00000614488 KATNA1O75449 491 aa6.8□□□□□ -1.32
SCAMP1-205ENST00000614488 ENDOD1O94919 500 aa6.8□□□□□ -1.32
SCAMP1-205ENST00000614488 HSP90B1P14625 803 aaKnown RBP6.8□□□□□ -1.32
SCAMP1-205ENST00000614488 TACR2P21452 398 aa6.8□□□□□ -1.32
SCAMP1-205ENST00000614488 IBSPP21815 317 aaPredicted RBP6.8□□□□□ -1.32
SCAMP1-205ENST00000614488 ADSLP30566 484 aaPredicted RBP6.8□□□□□ -1.32
SCAMP1-205ENST00000614488 PTH1RQ03431 593 aa6.8□□□□□ -1.32
SCAMP1-205ENST00000614488 FAM50AQ14320 339 aaKnown RBP6.8□□□□□ -1.32
SCAMP1-205ENST00000614488 ABCB5Q2M3G0 1257 aa6.8□□□□□ -1.32
SCAMP1-205ENST00000614488 PGM2L1Q6PCE3 622 aa6.8□□□□□ -1.32
SCAMP1-205ENST00000614488 Q6ZVL8 140 aa6.8□□□□□ -1.32
SCAMP1-205ENST00000614488 TRMT2AQ8IZ69 625 aaKnown RBP6.8□□□□□ -1.32
SCAMP1-205ENST00000614488 CPEB1Q9BZB8 566 aaKnown RBP6.8□□□□□ -1.32
SCAMP1-205ENST00000614488 DMRT3Q9NQL9 472 aa6.8□□□□□ -1.32
SCAMP1-205ENST00000614488 HDAC5Q9UQL6 1122 aa6.8□□□□□ -1.32
SCAMP1-205ENST00000614488 ZMYM3Q14202 1370 aa6.8□□□□□ -1.32
SCAMP1-205ENST00000614488 WASHC2CQ9Y4E1 1318 aa6.79□□□□□ -1.32
SCAMP1-205ENST00000614488 GABRDO14764 452 aa6.79□□□□□ -1.32
SCAMP1-205ENST00000614488 ADCY6O43306 1168 aa6.79□□□□□ -1.32
SCAMP1-205ENST00000614488 PEX11BO96011 259 aa6.79□□□□□ -1.32
SCAMP1-205ENST00000614488 MT-CO1P00395 513 aa6.79□□□□□ -1.32
SCAMP1-205ENST00000614488 AMHP03971 560 aa6.79□□□□□ -1.32
SCAMP1-205ENST00000614488 ZXDAP98168 799 aa6.79□□□□□ -1.32
SCAMP1-205ENST00000614488 TOB2Q14106 344 aaPredicted RBP6.79□□□□□ -1.32
SCAMP1-205ENST00000614488 CLUL1Q15846 466 aa6.79□□□□□ -1.32
SCAMP1-205ENST00000614488 VPS72Q15906 364 aa6.79□□□□□ -1.32
SCAMP1-205ENST00000614488 FAM47AQ5JRC9 791 aa6.79□□□□□ -1.32
SCAMP1-205ENST00000614488 ZNF572Q7Z3I7 529 aaPredicted RBP6.79□□□□□ -1.32
SCAMP1-205ENST00000614488 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.79□□□□□ -1.32
SCAMP1-205ENST00000614488 GPATCH3Q96I76 525 aa6.79□□□□□ -1.32
SCAMP1-205ENST00000614488 FAXDC2Q96IV6 333 aa6.79□□□□□ -1.32
SCAMP1-205ENST00000614488 NOP58Q9Y2X3 529 aaKnown RBP6.79□□□□□ -1.32
SCAMP1-205ENST00000614488 PCDHGA2Q9Y5H1 932 aa6.79□□□□□ -1.32
SCAMP1-205ENST00000614488 PRR5-ARHGAP8B1AHC4 643 aa6.78□□□□□ -1.32
SCAMP1-205ENST00000614488 FZD9O00144 591 aa6.78□□□□□ -1.32
SCAMP1-205ENST00000614488 PJA2O43164 708 aa6.78□□□□□ -1.32
SCAMP1-205ENST00000614488 C1SP09871 688 aa6.78□□□□□ -1.32
SCAMP1-205ENST00000614488 MYBL2P10244 700 aa6.78□□□□□ -1.32
SCAMP1-205ENST00000614488 C6P13671 934 aa6.78□□□□□ -1.32
SCAMP1-205ENST00000614488 HK1P19367 917 aa6.78□□□□□ -1.32
SCAMP1-205ENST00000614488 SREBF1P36956 1147 aa6.78□□□□□ -1.32
SCAMP1-205ENST00000614488 WASP42768 502 aa6.78□□□□□ -1.32
SCAMP1-205ENST00000614488 EVA1CP58658 441 aa6.78□□□□□ -1.32
SCAMP1-205ENST00000614488 SP140Q13342 867 aa6.78□□□□□ -1.32
SCAMP1-205ENST00000614488 NOMO1Q15155 1222 aa6.78□□□□□ -1.32
SCAMP1-205ENST00000614488 MFSD14BQ5SR56 506 aa6.78□□□□□ -1.32
SCAMP1-205ENST00000614488 DRICH1Q6PGQ1 229 aaPredicted RBP6.78□□□□□ -1.32
SCAMP1-205ENST00000614488 CEP95Q96GE4 821 aa6.78□□□□□ -1.32
SCAMP1-205ENST00000614488 PLEKHG4BQ96PX9 1271 aa6.78□□□□□ -1.32
SCAMP1-205ENST00000614488 UHRF1Q96T88 793 aaPredicted RBP6.78□□□□□ -1.32
SCAMP1-205ENST00000614488 CCDC8Q9H0W5 538 aaPredicted RBP6.78□□□□□ -1.32
SCAMP1-205ENST00000614488 LANCL2Q9NS86 450 aa6.78□□□□□ -1.32
SCAMP1-205ENST00000614488 SPEF1Q9Y4P9 236 aa6.78□□□□□ -1.32
SCAMP1-205ENST00000614488 KLHL33A6NCF5 533 aa6.77□□□□□ -1.33
SCAMP1-205ENST00000614488 GRXCR1A8MXD5 290 aa6.77□□□□□ -1.33
SCAMP1-205ENST00000614488 TRIM24O15164 1050 aa6.77□□□□□ -1.33
SCAMP1-205ENST00000614488 GSPT1P15170 499 aaKnown RBP6.77□□□□□ -1.33
SCAMP1-205ENST00000614488 GUCY1A2P33402 732 aa6.77□□□□□ -1.33
SCAMP1-205ENST00000614488 PTPN7P35236 360 aa6.77□□□□□ -1.33
SCAMP1-205ENST00000614488 PER3P56645 1201 aa6.77□□□□□ -1.33
SCAMP1-205ENST00000614488 XYLT1Q86Y38 959 aa6.77□□□□□ -1.33
SCAMP1-205ENST00000614488 PQLC1Q8N2U9 271 aa6.77□□□□□ -1.33
SCAMP1-205ENST00000614488 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.77□□□□□ -1.33
SCAMP1-205ENST00000614488 JADE3Q92613 823 aa6.77□□□□□ -1.33
SCAMP1-205ENST00000614488 PGBD4Q96DM1 585 aa6.77□□□□□ -1.33
SCAMP1-205ENST00000614488 FUBP3Q96I24 572 aaKnown RBP eCLIP6.77□□□□□ -1.33
SCAMP1-205ENST00000614488 SLC2A13Q96QE2 648 aa6.77□□□□□ -1.33
SCAMP1-205ENST00000614488 SLC13A1Q9BZW2 595 aa6.77□□□□□ -1.33
SCAMP1-205ENST00000614488 KCNH6Q9H252 994 aa6.77□□□□□ -1.33
SCAMP1-205ENST00000614488 HOMER2Q9NSB8 354 aa6.77□□□□□ -1.33
SCAMP1-205ENST00000614488 MRFAP1Q9Y605 127 aa6.77□□□□□ -1.33
SCAMP1-205ENST00000614488 TBKBP1A7MCY6 615 aa6.76□□□□□ -1.33
SCAMP1-205ENST00000614488 IL2RBP14784 551 aa6.76□□□□□ -1.33
SCAMP1-205ENST00000614488 ALOX15P16050 662 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms