RNA–Protein interactions for RNA: ENST00000613444.4

USP39-220, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-220ENST00000613444 PANX2Q96RD6 677 aa15.53■□□□□ 0.08
USP39-220ENST00000613444 MSTO1Q9BUK6 570 aa15.53■□□□□ 0.08
USP39-220ENST00000613444 KIAA1586Q9HCI6 787 aa15.53■□□□□ 0.08
USP39-220ENST00000613444 FAM207AQ9NSI2 230 aaPredicted RBP15.53■□□□□ 0.08
USP39-220ENST00000613444 TNFSF13BQ9Y275 285 aa15.53■□□□□ 0.08
USP39-220ENST00000613444 TRIM21P19474 475 aaKnown RBP15.52■□□□□ 0.08
USP39-220ENST00000613444 FECHP22830 423 aa15.52■□□□□ 0.08
USP39-220ENST00000613444 ACOT2P49753 483 aa15.52■□□□□ 0.08
USP39-220ENST00000613444 WNT7BP56706 349 aa15.52■□□□□ 0.08
USP39-220ENST00000613444 APBA1Q02410 837 aa15.52■□□□□ 0.08
USP39-220ENST00000613444 ATF7IP2Q5U623 682 aa15.52■□□□□ 0.08
USP39-220ENST00000613444 EEF1DP3Q658K8 133 aa15.52■□□□□ 0.08
USP39-220ENST00000613444 CNGA4Q8IV77 575 aa15.52■□□□□ 0.08
USP39-220ENST00000613444 TMC2Q8TDI7 906 aa15.52■□□□□ 0.08
USP39-220ENST00000613444 MMRN2Q9H8L6 949 aa15.52■□□□□ 0.08
USP39-220ENST00000613444 ZNF233A6NK53 670 aa15.52■□□□□ 0.07
USP39-220ENST00000613444 LRRIQ3A6PVS8 624 aaPredicted RBP15.52■□□□□ 0.07
USP39-220ENST00000613444 ESPNB1AK53 854 aa15.52■□□□□ 0.07
USP39-220ENST00000613444 MYCNP04198 464 aaPredicted RBP15.52■□□□□ 0.07
USP39-220ENST00000613444 SKILP12757 684 aa15.52■□□□□ 0.07
USP39-220ENST00000613444 SLC9A1P19634 815 aa15.52■□□□□ 0.07
USP39-220ENST00000613444 PON1P27169 355 aa15.52■□□□□ 0.07
USP39-220ENST00000613444 KRT9P35527 623 aa15.52■□□□□ 0.07
USP39-220ENST00000613444 ACLYP53396 1101 aa15.52■□□□□ 0.07
USP39-220ENST00000613444 CLDN10P78369 228 aa15.52■□□□□ 0.07
USP39-220ENST00000613444 MPZL3Q6UWV2 235 aa15.52■□□□□ 0.07
USP39-220ENST00000613444 IQCDQ96DY2 449 aa15.52■□□□□ 0.07
USP39-220ENST00000613444 PCMTD1Q96MG8 357 aaPredicted RBP15.52■□□□□ 0.07
USP39-220ENST00000613444 GANQ9H2C0 597 aa15.52■□□□□ 0.07
USP39-220ENST00000613444 ABHD10Q9NUJ1 306 aa15.52■□□□□ 0.07
USP39-220ENST00000613444 PMM2O15305 246 aa15.51■□□□□ 0.07
USP39-220ENST00000613444 TSPAN1O60635 241 aa15.51■□□□□ 0.07
USP39-220ENST00000613444 LDHAP00338 332 aaKnown RBP15.51■□□□□ 0.07
USP39-220ENST00000613444 ARF4P18085 180 aaPredicted RBP15.51■□□□□ 0.07
USP39-220ENST00000613444 EXOC3L4Q17RC7 722 aa15.51■□□□□ 0.07
USP39-220ENST00000613444 TAF2Q6P1X5 1199 aa15.51■□□□□ 0.07
USP39-220ENST00000613444 LMO3Q8TAP4 145 aa15.51■□□□□ 0.07
USP39-220ENST00000613444 KIAA1524Q8TCG1 905 aa15.51■□□□□ 0.07
USP39-220ENST00000613444 BAP1Q92560 729 aa15.51■□□□□ 0.07
USP39-220ENST00000613444 WNT8BQ93098 351 aa15.51■□□□□ 0.07
USP39-220ENST00000613444 CCDC51Q96ER9 411 aa15.51■□□□□ 0.07
USP39-220ENST00000613444 DNAJC7Q99615 494 aa15.51■□□□□ 0.07
USP39-220ENST00000613444 LSM14BQ9BX40 385 aaKnown RBP15.51■□□□□ 0.07
USP39-220ENST00000613444 SIX2Q9NPC8 291 aa15.51■□□□□ 0.07
USP39-220ENST00000613444 PLCB1Q9NQ66 1216 aa15.51■□□□□ 0.07
USP39-220ENST00000613444 LUC7L2Q9Y383 392 aaKnown RBP15.51■□□□□ 0.07
USP39-220ENST00000613444 DARSP14868 501 aaKnown RBP15.51■□□□□ 0.07
USP39-220ENST00000613444 NOLC1Q14978 699 aaKnown RBP eCLIP15.51■□□□□ 0.07
USP39-220ENST00000613444 PSMD6Q15008 389 aa15.51■□□□□ 0.07
USP39-220ENST00000613444 SEZ6Q53EL9 994 aa15.51■□□□□ 0.07
USP39-220ENST00000613444 GBP6Q6ZN66 633 aa15.51■□□□□ 0.07
USP39-220ENST00000613444 ZBTB33Q86T24 672 aa15.51■□□□□ 0.07
USP39-220ENST00000613444 SERINC5Q86VE9 423 aa15.51■□□□□ 0.07
USP39-220ENST00000613444 CDR2LQ86X02 465 aaPredicted RBP15.51■□□□□ 0.07
USP39-220ENST00000613444 NME8Q8N427 588 aa15.51■□□□□ 0.07
USP39-220ENST00000613444 TMEM40Q8WWA1 233 aa15.51■□□□□ 0.07
USP39-220ENST00000613444 CCDC127Q96BQ5 260 aa15.51■□□□□ 0.07
USP39-220ENST00000613444 POP1Q99575 1024 aaKnown RBP15.51■□□□□ 0.07
USP39-220ENST00000613444 OSMRQ99650 979 aa15.51■□□□□ 0.07
USP39-220ENST00000613444 TMEM117Q9H0C3 514 aa15.51■□□□□ 0.07
USP39-220ENST00000613444 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.51■□□□□ 0.07
USP39-220ENST00000613444 CDT1Q9H211 546 aa15.51■□□□□ 0.07
USP39-220ENST00000613444 PDZD7Q9H5P4 517 aa15.51■□□□□ 0.07
USP39-220ENST00000613444 GCNT4Q9P109 453 aa15.51■□□□□ 0.07
USP39-220ENST00000613444 OGTO15294 1046 aa15.5■□□□□ 0.07
USP39-220ENST00000613444 CABYRO75952 493 aa15.5■□□□□ 0.07
USP39-220ENST00000613444 TPM1P09493 284 aa15.5■□□□□ 0.07
USP39-220ENST00000613444 ACTN1P12814 892 aa15.5■□□□□ 0.07
USP39-220ENST00000613444 TNFSF9P41273 254 aa15.5■□□□□ 0.07
USP39-220ENST00000613444 MATR3P43243 847 aaKnown RBP eCLIP15.5■□□□□ 0.07
USP39-220ENST00000613444 GCLMP48507 274 aa15.5■□□□□ 0.07
USP39-220ENST00000613444 ZBED6P86452 979 aa15.5■□□□□ 0.07
USP39-220ENST00000613444 CCDC112Q8NEF3 446 aa15.5■□□□□ 0.07
USP39-220ENST00000613444 NEK11Q8NG66 645 aa15.5■□□□□ 0.07
USP39-220ENST00000613444 SCLT1Q96NL6 688 aa15.5■□□□□ 0.07
USP39-220ENST00000613444 TSEN34Q9BSV6 310 aaKnown RBP15.5■□□□□ 0.07
USP39-220ENST00000613444 TCHPQ9BT92 498 aa15.5■□□□□ 0.07
USP39-220ENST00000613444 GCOM2Q9BZD3 368 aaPredicted RBP15.5■□□□□ 0.07
USP39-220ENST00000613444 EDEM3Q9BZQ6 932 aa15.5■□□□□ 0.07
USP39-220ENST00000613444 UNC93B1Q9H1C4 597 aa15.5■□□□□ 0.07
USP39-220ENST00000613444 CITO14578 2027 aa15.5■□□□□ 0.07
USP39-220ENST00000613444 TRIP11Q15643 1979 aa15.5■□□□□ 0.07
USP39-220ENST00000613444 A0A1B0GUA9 196 aa15.49■□□□□ 0.07
USP39-220ENST00000613444 MOXD2PA6NHM9 499 aa15.49■□□□□ 0.07
USP39-220ENST00000613444 P4HA2O15460 535 aa15.49■□□□□ 0.07
USP39-220ENST00000613444 HARSP12081 509 aaKnown RBP15.49■□□□□ 0.07
USP39-220ENST00000613444 FGFR4P22455 802 aa15.49■□□□□ 0.07
USP39-220ENST00000613444 HOXA11P31270 313 aaPredicted RBP15.49■□□□□ 0.07
USP39-220ENST00000613444 MYL7Q01449 175 aa15.49■□□□□ 0.07
USP39-220ENST00000613444 ZNF568Q3ZCX4 644 aa15.49■□□□□ 0.07
USP39-220ENST00000613444 EPC2Q52LR7 807 aa15.49■□□□□ 0.07
USP39-220ENST00000613444 KLHDC7AQ5VTJ3 777 aa15.49■□□□□ 0.07
USP39-220ENST00000613444 TRIM65Q6PJ69 517 aa15.49■□□□□ 0.07
USP39-220ENST00000613444 WDR59Q6PJI9 974 aa15.49■□□□□ 0.07
USP39-220ENST00000613444 OR8K1Q8NGG5 319 aa15.49■□□□□ 0.07
USP39-220ENST00000613444 ZNF516Q92618 1163 aa15.49■□□□□ 0.07
USP39-220ENST00000613444 CPB2Q96IY4 423 aa15.49■□□□□ 0.07
USP39-220ENST00000613444 BAG1Q99933 345 aaPredicted RBP15.49■□□□□ 0.07
USP39-220ENST00000613444 PAK6Q9NQU5 681 aaPredicted RBP15.49■□□□□ 0.07
USP39-220ENST00000613444 TOPORSQ9NS56 1045 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms