RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 POTECB2RU33 542 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 ZNF12P17014 697 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 ATP2B4P23634 1241 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 FNTAP49354 379 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 GPC5P78333 572 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 SGSM1Q2NKQ1 1148 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 TIMM50Q3ZCQ8 353 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 ZKSCAN4Q969J2 545 aaPredicted RBP9.26□□□□□ -0.93
TTC28-208ENST00000612946 DDX25Q9UHL0 483 aaKnown RBP9.26□□□□□ -0.93
TTC28-208ENST00000612946 C2CD2Q9Y426 696 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 UBTFL6P0CB48 400 aaPredicted RBP9.26□□□□□ -0.93
TTC28-208ENST00000612946 IMPDH2P12268 514 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 NME9Q86XW9 330 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 GRIN2AQ12879 1464 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 IL12AP29459 219 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 ADAT2Q7Z6V5 191 aaKnown RBP9.26□□□□□ -0.93
TTC28-208ENST00000612946 EGFL6Q8IUX8 553 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 MICU2Q8IYU8 434 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 CDYLQ9Y232 598 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 PLCH2O75038 1416 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 CDH3P22223 829 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 HOXC8P31273 242 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 ARL4AP40617 200 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 RIPK1Q13546 671 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 TBC1D10BQ4KMP7 808 aaPredicted RBP9.26□□□□□ -0.93
TTC28-208ENST00000612946 ZC3H12BQ5HYM0 836 aaKnown RBP9.26□□□□□ -0.93
TTC28-208ENST00000612946 CATSPER3Q86XQ3 398 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 PAGE5Q96GU1 130 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 IARS2Q9NSE4 1012 aaKnown RBP9.26□□□□□ -0.93
TTC28-208ENST00000612946 TTLL1O95922 423 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 PIK3CAP42336 1068 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 KCNB1Q14721 858 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 TCHHL1Q5QJ38 904 aaPredicted RBP9.26□□□□□ -0.93
TTC28-208ENST00000612946 ARMC4Q5T2S8 1044 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 MTHFD1LQ6UB35 978 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 CCDC36Q8IYA8 594 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 DISC1Q9NRI5 854 aa9.26□□□□□ -0.93
TTC28-208ENST00000612946 SERPINH1P50454 418 aaKnown RBP9.25□□□□□ -0.93
TTC28-208ENST00000612946 CENPPQ6IPU0 288 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 NFRKBQ6P4R8 1299 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 SORCS3Q9UPU3 1222 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 WBP11Q9Y2W2 641 aaKnown RBP9.25□□□□□ -0.93
TTC28-208ENST00000612946 MYH13Q9UKX3 1938 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 TNPO2O14787 897 aaKnown RBP9.25□□□□□ -0.93
TTC28-208ENST00000612946 STX5Q13190 355 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 PHF21AQ96BD5 680 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 WDR70Q9NW82 654 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 ZNF521Q96K83 1311 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 K7ENM7 598 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 TM9SF1O15321 606 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 PSTPIP1O43586 416 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 PEX5P50542 639 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 NR1H2P55055 460 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 BBS9Q3SYG4 887 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 CCDC137Q6PK04 289 aaKnown RBP9.25□□□□□ -0.93
TTC28-208ENST00000612946 LRRC74BQ6ZQY2 392 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 FMR1NBQ8N0W7 255 aaPredicted RBP9.25□□□□□ -0.93
TTC28-208ENST00000612946 SVOPQ8N4V2 548 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 UHMK1Q8TAS1 419 aaKnown RBP9.25□□□□□ -0.93
TTC28-208ENST00000612946 RBBP8Q99708 897 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 EPAS1Q99814 870 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 ABCB11O95342 1321 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 C21orf2O43822 256 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 CYP2J2P51589 502 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 XRCC4Q13426 336 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 RSRC2Q7L4I2 434 aaKnown RBP9.25□□□□□ -0.93
TTC28-208ENST00000612946 UBE2Q1Q7Z7E8 422 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 RBM46Q8TBY0 533 aaKnown RBP9.25□□□□□ -0.93
TTC28-208ENST00000612946 BORCS5Q969J3 196 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 CCDC85AQ96PX6 553 aaPredicted RBP9.25□□□□□ -0.93
TTC28-208ENST00000612946 CENPXA8MT69 81 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 PRPSAP2O60256 369 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 TRIM13O60858 407 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 HSPD1P10809 573 aaKnown RBP9.25□□□□□ -0.93
TTC28-208ENST00000612946 DMC1Q14565 340 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 PDPRQ8NCN5 879 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 STK32AQ8WU08 396 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 ZNF556Q9HAH1 456 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 ATP6V1C1P21283 382 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 ADSLP30566 484 aaPredicted RBP9.25□□□□□ -0.93
TTC28-208ENST00000612946 CWF19L1Q69YN2 538 aaKnown RBP9.25□□□□□ -0.93
TTC28-208ENST00000612946 SHCBP1Q8NEM2 672 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 EFHD2Q96C19 240 aaPredicted RBP9.25□□□□□ -0.93
TTC28-208ENST00000612946 ANKRD36BP1Q96IX9 119 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 KRT84Q9NSB2 600 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 MYRFQ9Y2G1 1151 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 CD109Q6YHK3 1445 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 ARHGEF40Q8TER5 1519 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 TMEM120BA0PK00 339 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 SPIDRQ14159 915 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 TMTC4Q5T4D3 741 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 THOC7Q6I9Y2 204 aaKnown RBP9.25□□□□□ -0.93
TTC28-208ENST00000612946 ZCCHC7Q8N3Z6 543 aaKnown RBP9.25□□□□□ -0.93
TTC28-208ENST00000612946 TSPAN17Q96FV3 270 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 YWHAHQ04917 246 aaPredicted RBP9.25□□□□□ -0.93
TTC28-208ENST00000612946 KRT74Q7RTS7 529 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 PCDHA12Q9UN75 941 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 PZPP20742 1482 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 CES2O00748 559 aa9.25□□□□□ -0.93
TTC28-208ENST00000612946 CYP2E1P05181 493 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms