RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 SH3GL3Q99963 347 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 SNX25Q9H3E2 840 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 NDST4Q9H3R1 872 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 BTBD19C9JJ37 291 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 STK25O00506 426 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 SLC4A1P02730 911 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 ZNF18P17022 549 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 KLRC1P26715 233 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 PHKA2P46019 1235 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 CRYMQ14894 314 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 NPY5RQ15761 445 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 WDR72Q3MJ13 1102 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 PPP1R21Q6ZMI0 780 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 UNC13DQ70J99 1090 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 DAAM2Q86T65 1068 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 PARD3BQ8TEW8 1205 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 HVCN1Q96D96 273 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 KIF12Q96FN5 646 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 PI4K2AQ9BTU6 479 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 DDX20Q9UHI6 824 aaKnown RBP11.61□□□□□ -0.55
FAM3A-221ENST00000612856 TTC26A0AVF1 554 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 AFPP02771 609 aaKnown RBP11.6□□□□□ -0.55
FAM3A-221ENST00000612856 FDX1P10109 184 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 PPP1R2P41236 205 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 JAG1P78504 1218 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 XKR3Q5GH77 459 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 TMEM270Q6UE05 265 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 MB21D1Q8N884 522 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 XXYLT1Q8NBI6 393 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 CCDC51Q96ER9 411 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 EPN3Q9H201 632 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 H3BRB1 525 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 ATP9AO75110 1047 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 RGS2P41220 211 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 RCAN1P53805 252 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 BCAR1P56945 870 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 DYNLT1P63172 113 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 PPATQ06203 517 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 DPYDQ12882 1025 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 WDR93Q6P2C0 686 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 RPUSD2Q8IZ73 545 aaKnown RBP11.6□□□□□ -0.55
FAM3A-221ENST00000612856 CHST13Q8NET6 341 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 BHMTQ93088 406 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 STAMBPL1Q96FJ0 436 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 PAIP2Q9BPZ3 127 aaKnown RBP11.6□□□□□ -0.55
FAM3A-221ENST00000612856 TUT1Q9H6E5 874 aaKnown RBP11.6□□□□□ -0.55
FAM3A-221ENST00000612856 MRPL42Q9Y6G3 142 aaKnown RBP11.6□□□□□ -0.55
FAM3A-221ENST00000612856 CICQ96RK0 1608 aaPredicted RBP11.6□□□□□ -0.55
FAM3A-221ENST00000612856 GNAT1P11488 350 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 GAP43P17677 238 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 SESN3P58005 492 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 PPP2R5CQ13362 524 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 ZNF579Q8NAF0 562 aaKnown RBP11.6□□□□□ -0.55
FAM3A-221ENST00000612856 GMCL1Q96IK5 515 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 MS4A14Q96JA4 679 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 RUSC1Q9BVN2 902 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 SENP6Q9GZR1 1112 aaPredicted RBP11.6□□□□□ -0.55
FAM3A-221ENST00000612856 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.6□□□□□ -0.55
FAM3A-221ENST00000612856 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.6□□□□□ -0.55
FAM3A-221ENST00000612856 MYH7P12883 1935 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 CXCL11O14625 94 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 PRKCBP05771 671 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 P4HA1P13674 534 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 SFNP31947 248 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 PTK2Q05397 1052 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 EHHADHQ08426 723 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 RRP1BQ14684 758 aaKnown RBP11.6□□□□□ -0.55
FAM3A-221ENST00000612856 UAP1Q16222 522 aaPredicted RBP11.6□□□□□ -0.55
FAM3A-221ENST00000612856 THEMIS2Q5TEJ8 643 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 ANKRD40Q6AI12 368 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 PEX26Q7Z412 305 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 SMARCAD1Q9H4L7 1026 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 RBAKQ9NYW8 714 aaPredicted RBP11.6□□□□□ -0.55
FAM3A-221ENST00000612856 PLAAQ9Y263 795 aa11.6□□□□□ -0.55
FAM3A-221ENST00000612856 ZSCAN5CA6NGD5 496 aaPredicted RBP11.59□□□□□ -0.55
FAM3A-221ENST00000612856 SPDYE16A6NNV3 312 aaPredicted RBP11.59□□□□□ -0.55
FAM3A-221ENST00000612856 PDE6CP51160 858 aa11.59□□□□□ -0.55
FAM3A-221ENST00000612856 KCNH2Q12809 1159 aa11.59□□□□□ -0.55
FAM3A-221ENST00000612856 SMAD1Q15797 465 aaKnown RBP11.59□□□□□ -0.55
FAM3A-221ENST00000612856 CCDC117Q8IWD4 279 aaPredicted RBP11.59□□□□□ -0.55
FAM3A-221ENST00000612856 MYCBPAPQ8TBZ2 947 aa11.59□□□□□ -0.55
FAM3A-221ENST00000612856 GCOM2Q9BZD3 368 aaPredicted RBP11.59□□□□□ -0.55
FAM3A-221ENST00000612856 RIOX1Q9H6W3 641 aa11.59□□□□□ -0.55
FAM3A-221ENST00000612856 METTL14Q9HCE5 456 aaKnown RBP11.59□□□□□ -0.55
FAM3A-221ENST00000612856 PXMP2Q9NR77 195 aa11.59□□□□□ -0.55
FAM3A-221ENST00000612856 AGO2Q9UKV8 859 aaKnown RBP11.59□□□□□ -0.55
FAM3A-221ENST00000612856 CCDC85CA6NKD9 419 aa11.59□□□□□ -0.55
FAM3A-221ENST00000612856 EML1O00423 815 aa11.59□□□□□ -0.55
FAM3A-221ENST00000612856 LGR5O75473 907 aa11.59□□□□□ -0.55
FAM3A-221ENST00000612856 GHRP10912 638 aa11.59□□□□□ -0.55
FAM3A-221ENST00000612856 CIITAP33076 1130 aa11.59□□□□□ -0.55
FAM3A-221ENST00000612856 NSFP46459 744 aaKnown RBP11.59□□□□□ -0.55
FAM3A-221ENST00000612856 CARSP49589 748 aaKnown RBP11.59□□□□□ -0.55
FAM3A-221ENST00000612856 EMC2Q15006 297 aa11.59□□□□□ -0.55
FAM3A-221ENST00000612856 IFI16Q16666 785 aaKnown RBP11.59□□□□□ -0.55
FAM3A-221ENST00000612856 C2CD6Q53TS8 623 aa11.59□□□□□ -0.55
FAM3A-221ENST00000612856 SPATA4Q8NEY3 305 aa11.59□□□□□ -0.55
FAM3A-221ENST00000612856 MIS12Q9H081 205 aa11.59□□□□□ -0.55
FAM3A-221ENST00000612856 DPH5Q9H2P9 285 aa11.59□□□□□ -0.55
FAM3A-221ENST00000612856 TMEM206Q9H813 350 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms