RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 CRELD2Q6UXH1 353 aaPredicted RBP13.37□□□□□ -0.27
CBWD1-220ENST00000612045 TSHZ1Q6ZSZ6 1077 aa13.37□□□□□ -0.27
CBWD1-220ENST00000612045 IFNLR1Q8IU57 520 aaPredicted RBP13.37□□□□□ -0.27
CBWD1-220ENST00000612045 PPP1R13LQ8WUF5 828 aa13.37□□□□□ -0.27
CBWD1-220ENST00000612045 PPP1R16BQ96T49 567 aa13.37□□□□□ -0.27
CBWD1-220ENST00000612045 FDXACB1Q9BRP7 624 aaPredicted RBP13.37□□□□□ -0.27
CBWD1-220ENST00000612045 DESI2Q9BSY9 194 aa13.37□□□□□ -0.27
CBWD1-220ENST00000612045 UPF3AQ9H1J1 476 aaKnown RBP13.37□□□□□ -0.27
CBWD1-220ENST00000612045 FBXL5Q9UKA1 691 aa13.37□□□□□ -0.27
CBWD1-220ENST00000612045 PPP2R2CQ9Y2T4 447 aa13.37□□□□□ -0.27
CBWD1-220ENST00000612045 DNAH12Q6ZR08 3092 aa13.37□□□□□ -0.27
CBWD1-220ENST00000612045 ZSCAN12O43309 604 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 IQCF3P0C7M6 154 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 ACOT2P49753 483 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 MXI1P50539 228 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 GPC3P51654 580 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 CETN1Q12798 172 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 PRPF4BQ13523 1007 aaKnown RBP13.36□□□□□ -0.27
CBWD1-220ENST00000612045 HIC1Q14526 733 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 FAM187BQ17R55 369 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 GNASQ5JWF2 1037 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 EHBP1Q8NDI1 1231 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 NLRP7Q8WX94 980 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 SYN2Q92777 582 aaPredicted RBP13.36□□□□□ -0.27
CBWD1-220ENST00000612045 POP1Q99575 1024 aaKnown RBP13.36□□□□□ -0.27
CBWD1-220ENST00000612045 TCHPQ9BT92 498 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 TMEM117Q9H0C3 514 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 INTS2Q9H0H0 1204 aaKnown RBP13.36□□□□□ -0.27
CBWD1-220ENST00000612045 SPC25Q9HBM1 224 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 PRMT7Q9NVM4 692 aaPredicted RBP13.36□□□□□ -0.27
CBWD1-220ENST00000612045 FHOD1Q9Y613 1164 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 TULP1O00294 542 aaPredicted RBP13.36□□□□□ -0.27
CBWD1-220ENST00000612045 ABLIM1O14639 778 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 B4GALT5O43286 388 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 ZEB2O60315 1214 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 PGK1P00558 417 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 GNRH1P01148 92 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 PROZP22891 400 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 CCND3P30281 292 aaPredicted RBP13.36□□□□□ -0.27
CBWD1-220ENST00000612045 GTF2H1P32780 548 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 NKX3-2P78367 333 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 ADAM17P78536 824 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 MCL1Q07820 350 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 PSMD6Q15008 389 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 ZBTB41Q5SVQ8 909 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 ATF7IP2Q5U623 682 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 ZBTB33Q86T24 672 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 LMO3Q8TAP4 145 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 NHEJ1Q9H9Q4 299 aaPredicted RBP13.36□□□□□ -0.27
CBWD1-220ENST00000612045 TMEM8AQ9HCN3 771 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 PTPRHQ9HD43 1115 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 ADGRG1Q9Y653 693 aa13.36□□□□□ -0.27
CBWD1-220ENST00000612045 EPN1Q9Y6I3 576 aaPredicted RBP13.36□□□□□ -0.27
CBWD1-220ENST00000612045 SMIM35A0A1B0GVV1 85 aa13.35□□□□□ -0.27
CBWD1-220ENST00000612045 FAM189A1O60320 539 aa13.35□□□□□ -0.27
CBWD1-220ENST00000612045 CSDE1O75534 798 aaKnown RBP13.35□□□□□ -0.27
CBWD1-220ENST00000612045 HMGCRP04035 888 aa13.35□□□□□ -0.27
CBWD1-220ENST00000612045 CCDC175P0C221 793 aa13.35□□□□□ -0.27
CBWD1-220ENST00000612045 DLATP10515 647 aaKnown RBP13.35□□□□□ -0.27
CBWD1-220ENST00000612045 CYP2C9P11712 490 aa13.35□□□□□ -0.27
CBWD1-220ENST00000612045 HARSP12081 509 aaKnown RBP13.35□□□□□ -0.27
CBWD1-220ENST00000612045 CLDN10P78369 228 aa13.35□□□□□ -0.27
CBWD1-220ENST00000612045 AMHR2Q16671 573 aa13.35□□□□□ -0.27
CBWD1-220ENST00000612045 EPC2Q52LR7 807 aa13.35□□□□□ -0.27
CBWD1-220ENST00000612045 SFMBT2Q5VUG0 894 aa13.35□□□□□ -0.27
CBWD1-220ENST00000612045 KRT39Q6A163 491 aa13.35□□□□□ -0.27
CBWD1-220ENST00000612045 IQCEQ6IPM2 695 aa13.35□□□□□ -0.27
CBWD1-220ENST00000612045 MPZL3Q6UWV2 235 aa13.35□□□□□ -0.27
CBWD1-220ENST00000612045 ZNF410Q86VK4 478 aa13.35□□□□□ -0.27
CBWD1-220ENST00000612045 REXO1L1PQ8IX06 675 aa13.35□□□□□ -0.27
CBWD1-220ENST00000612045 CCDC170Q8IYT3 715 aa13.35□□□□□ -0.27
CBWD1-220ENST00000612045 PRIMPOLQ96LW4 560 aa13.35□□□□□ -0.27
CBWD1-220ENST00000612045 C16orf45Q96MC5 204 aaPredicted RBP13.35□□□□□ -0.27
CBWD1-220ENST00000612045 SCLT1Q96NL6 688 aa13.35□□□□□ -0.27
CBWD1-220ENST00000612045 MTG1Q9BT17 334 aaPredicted RBP13.35□□□□□ -0.27
CBWD1-220ENST00000612045 FAM49AQ9H0Q0 323 aaPredicted RBP13.35□□□□□ -0.27
CBWD1-220ENST00000612045 TOPORSQ9NS56 1045 aaPredicted RBP13.35□□□□□ -0.27
CBWD1-220ENST00000612045 RBAKQ9NYW8 714 aaPredicted RBP13.35□□□□□ -0.27
CBWD1-220ENST00000612045 MYO6Q9UM54 1294 aa13.35□□□□□ -0.27
CBWD1-220ENST00000612045 THSD7BQ9C0I4 1608 aa13.35□□□□□ -0.27
CBWD1-220ENST00000612045 C17orf102A2RUQ5 167 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 ADAMTS4O75173 837 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 NDUFA10O95299 355 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 HOXC8P31273 242 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 CDC42EP1Q00587 391 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 MAP2K1Q02750 393 aaPredicted RBP13.34□□□□□ -0.27
CBWD1-220ENST00000612045 RAPGEF1Q13905 1077 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 TMEM132AQ24JP5 1023 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 SEZ6Q53EL9 994 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 MAP3K21Q5TCX8 1036 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 GJB7Q6PEY0 223 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 RUFY4Q6ZNE9 571 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 NYAP1Q6ZVC0 841 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 C7orf31Q8N865 590 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 RAET1EQ8TD07 263 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 ERO1AQ96HE7 468 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 SPAG5Q96R06 1193 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 FNBP1Q96RU3 617 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 XPNPEP3Q9NQH7 507 aa13.34□□□□□ -0.27
CBWD1-220ENST00000612045 AIPL1Q9NZN9 384 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms