RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 NOCTQ9UK39 431 aaKnown RBP18.54■□□□□ 0.56
NEK3-206ENST00000611833 NOVA2Q9UNW9 492 aaKnown RBP18.54■□□□□ 0.56
NEK3-206ENST00000611833 E7EVH7 732 aa18.54■□□□□ 0.56
NEK3-206ENST00000611833 PMM2O15305 246 aa18.54■□□□□ 0.56
NEK3-206ENST00000611833 ATMINO43313 823 aaPredicted RBP18.54■□□□□ 0.56
NEK3-206ENST00000611833 PHF2O75151 1096 aa18.54■□□□□ 0.56
NEK3-206ENST00000611833 PPFIA2O75334 1257 aa18.54■□□□□ 0.56
NEK3-206ENST00000611833 SFNP31947 248 aa18.54■□□□□ 0.56
NEK3-206ENST00000611833 MARCKSL1P49006 195 aa18.54■□□□□ 0.56
NEK3-206ENST00000611833 KRT76Q01546 638 aa18.54■□□□□ 0.56
NEK3-206ENST00000611833 PPARDQ03181 441 aa18.54■□□□□ 0.56
NEK3-206ENST00000611833 DMP1Q13316 513 aaPredicted RBP18.54■□□□□ 0.56
NEK3-206ENST00000611833 TNFAIP1Q13829 316 aa18.54■□□□□ 0.56
NEK3-206ENST00000611833 TTC31Q49AM3 519 aaPredicted RBP18.54■□□□□ 0.56
NEK3-206ENST00000611833 KRT39Q6A163 491 aa18.54■□□□□ 0.56
NEK3-206ENST00000611833 NLRP14Q86W24 1093 aa18.54■□□□□ 0.56
NEK3-206ENST00000611833 MICALL1Q8N3F8 863 aa18.54■□□□□ 0.56
NEK3-206ENST00000611833 ZNF473Q8WTR7 871 aaKnown RBP18.54■□□□□ 0.56
NEK3-206ENST00000611833 MAGOHBQ96A72 148 aaKnown RBP18.54■□□□□ 0.56
NEK3-206ENST00000611833 C18orf8Q96DM3 657 aa18.54■□□□□ 0.56
NEK3-206ENST00000611833 CCT8L2Q96SF2 557 aa18.54■□□□□ 0.56
NEK3-206ENST00000611833 PPANQ9NQ55 473 aaKnown RBP18.54■□□□□ 0.56
NEK3-206ENST00000611833 ANKEF1Q9NU02 776 aa18.54■□□□□ 0.56
NEK3-206ENST00000611833 SNX24Q9Y343 169 aa18.54■□□□□ 0.56
NEK3-206ENST00000611833 VWA5AO00534 786 aa18.53■□□□□ 0.56
NEK3-206ENST00000611833 ZBED4O75132 1171 aa18.53■□□□□ 0.56
NEK3-206ENST00000611833 MMEP08473 750 aa18.53■□□□□ 0.56
NEK3-206ENST00000611833 NPTX2P47972 431 aa18.53■□□□□ 0.56
NEK3-206ENST00000611833 PLTPP55058 493 aa18.53■□□□□ 0.56
NEK3-206ENST00000611833 SPATS2Q86XZ4 545 aaKnown RBP18.53■□□□□ 0.56
NEK3-206ENST00000611833 SEMA4DQ92854 862 aa18.53■□□□□ 0.56
NEK3-206ENST00000611833 ATG4CQ96DT6 458 aa18.53■□□□□ 0.56
NEK3-206ENST00000611833 WNT8AQ9H1J5 351 aa18.53■□□□□ 0.56
NEK3-206ENST00000611833 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.53■□□□□ 0.56
NEK3-206ENST00000611833 PARP14Q460N5 1801 aa18.53■□□□□ 0.56
NEK3-206ENST00000611833 KIAA0754O94854 1291 aa18.52■□□□□ 0.56
NEK3-206ENST00000611833 CNGA1P29973 690 aa18.52■□□□□ 0.56
NEK3-206ENST00000611833 CHRNA3P32297 505 aa18.52■□□□□ 0.56
NEK3-206ENST00000611833 BAATQ14032 418 aaPredicted RBP18.52■□□□□ 0.56
NEK3-206ENST00000611833 MORC4Q8TE76 937 aa18.52■□□□□ 0.56
NEK3-206ENST00000611833 POP1Q99575 1024 aaKnown RBP18.52■□□□□ 0.56
NEK3-206ENST00000611833 NUP85Q9BW27 656 aa18.52■□□□□ 0.56
NEK3-206ENST00000611833 USP20Q9Y2K6 914 aa18.52■□□□□ 0.56
NEK3-206ENST00000611833 DENND3A2RUS2 1198 aa18.52■□□□□ 0.56
NEK3-206ENST00000611833 SPOPO43791 374 aa18.52■□□□□ 0.56
NEK3-206ENST00000611833 LIG3P49916 1009 aa18.52■□□□□ 0.56
NEK3-206ENST00000611833 EIF3BP55884 814 aaKnown RBP18.52■□□□□ 0.56
NEK3-206ENST00000611833 ZNF280AP59817 542 aaPredicted RBP18.52■□□□□ 0.56
NEK3-206ENST00000611833 MCCD1P59942 119 aaPredicted RBP18.52■□□□□ 0.56
NEK3-206ENST00000611833 PPP2R2AP63151 447 aa18.52■□□□□ 0.56
NEK3-206ENST00000611833 SPDYCQ5MJ68 293 aa18.52■□□□□ 0.56
NEK3-206ENST00000611833 MICALCLQ6ZW33 695 aa18.52■□□□□ 0.56
NEK3-206ENST00000611833 MAP4K3Q8IVH8 894 aa18.52■□□□□ 0.56
NEK3-206ENST00000611833 MYCBPAPQ8TBZ2 947 aa18.52■□□□□ 0.56
NEK3-206ENST00000611833 ZNF564Q8TBZ8 553 aaPredicted RBP18.52■□□□□ 0.56
NEK3-206ENST00000611833 PARD3BQ8TEW8 1205 aa18.52■□□□□ 0.56
NEK3-206ENST00000611833 JDP2Q8WYK2 163 aa18.52■□□□□ 0.56
NEK3-206ENST00000611833 BSNDQ8WZ55 320 aa18.52■□□□□ 0.56
NEK3-206ENST00000611833 SHC3Q92529 594 aa18.52■□□□□ 0.56
NEK3-206ENST00000611833 ZNF653Q96CK0 615 aa18.52■□□□□ 0.56
NEK3-206ENST00000611833 TMEM8AQ9HCN3 771 aa18.52■□□□□ 0.56
NEK3-206ENST00000611833 KMT5AQ9NQR1 393 aa18.52■□□□□ 0.56
NEK3-206ENST00000611833 ZDHHC18Q9NUE0 388 aa18.52■□□□□ 0.56
NEK3-206ENST00000611833 TRPC6Q9Y210 931 aa18.52■□□□□ 0.56
NEK3-206ENST00000611833 KIAA0391O15091 583 aaKnown RBP18.51■□□□□ 0.55
NEK3-206ENST00000611833 CYP11B1P15538 503 aa18.51■□□□□ 0.55
NEK3-206ENST00000611833 PDE6CP51160 858 aa18.51■□□□□ 0.55
NEK3-206ENST00000611833 SOX10P56693 466 aa18.51■□□□□ 0.55
NEK3-206ENST00000611833 MAGOHP61326 146 aaKnown RBP18.51■□□□□ 0.55
NEK3-206ENST00000611833 FMO1Q01740 532 aa18.51■□□□□ 0.55
NEK3-206ENST00000611833 PRELID2Q8N945 189 aa18.51■□□□□ 0.55
NEK3-206ENST00000611833 NT5C1BQ96P26 610 aa18.51■□□□□ 0.55
NEK3-206ENST00000611833 MOV10L1Q9BXT6 1211 aaKnown RBP18.51■□□□□ 0.55
NEK3-206ENST00000611833 RNF146Q9NTX7 359 aa18.51■□□□□ 0.55
NEK3-206ENST00000611833 GINM1Q9NU53 330 aa18.51■□□□□ 0.55
NEK3-206ENST00000611833 WDR81Q562E7 1941 aa18.51■□□□□ 0.55
NEK3-206ENST00000611833 SRRM3A6NNA2 597 aaPredicted RBP18.51■□□□□ 0.55
NEK3-206ENST00000611833 MTA2O94776 668 aa18.51■□□□□ 0.55
NEK3-206ENST00000611833 GGPS1O95749 300 aa18.51■□□□□ 0.55
NEK3-206ENST00000611833 PEX5P50542 639 aa18.51■□□□□ 0.55
NEK3-206ENST00000611833 PMS2P54278 862 aa18.51■□□□□ 0.55
NEK3-206ENST00000611833 DRG2P55039 364 aaKnown RBP18.51■□□□□ 0.55
NEK3-206ENST00000611833 HVCN1Q96D96 273 aa18.51■□□□□ 0.55
NEK3-206ENST00000611833 BTBD6Q96KE9 485 aa18.51■□□□□ 0.55
NEK3-206ENST00000611833 TXLNGYQ9BZA5 131 aa18.51■□□□□ 0.55
NEK3-206ENST00000611833 PODXLO00592 558 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 ZNF862O60290 1169 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 FAM107AO95990 144 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 PYGMP11217 842 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 CTNNA2P26232 953 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 TMOD1P28289 359 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 PTGIRP43119 386 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 SLC39A4Q6P5W5 647 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 CCDC137Q6PK04 289 aaKnown RBP18.5■□□□□ 0.55
NEK3-206ENST00000611833 OTUD6AQ7L8S5 288 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 SAMD7Q7Z3H4 446 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 NLRX1Q86UT6 975 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 PACS2Q86VP3 889 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 VSIG10LQ86VR7 867 aa18.5■□□□□ 0.55
NEK3-206ENST00000611833 FBXL13Q8NEE6 735 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms