RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 RYBPQ8N488 228 aaPredicted RBP4.05□□□□□ -1.76
RNF38-210ENST00000611646 TSEN2Q8NCE0 465 aaKnown RBP4.05□□□□□ -1.76
RNF38-210ENST00000611646 SLC4A9Q96Q91 983 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 WRNIP1Q96S55 665 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 MTA3Q9BTC8 594 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 TMEM39BQ9GZU3 492 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 SLC38A10Q9HBR0 1119 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 NPHS2Q9NP85 383 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 TSR3Q9UJK0 312 aaKnown RBP4.05□□□□□ -1.76
RNF38-210ENST00000611646 PRR12Q9ULL5 1215 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 PLAGL2Q9UPG8 496 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 SLC4A7Q9Y6M7 1214 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 VCANP13611 3396 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 TISP43B9A030 160 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 MSH4O15457 936 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 GYG2O15488 501 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 ZBED1O96006 694 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 P4HBP07237 508 aaKnown RBP4.05□□□□□ -1.76
RNF38-210ENST00000611646 YY1P25490 414 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 HNRNPH1P31943 449 aaKnown RBP4.05□□□□□ -1.76
RNF38-210ENST00000611646 CHRNA3P32297 505 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 YWHAEP62258 255 aaKnown RBP4.05□□□□□ -1.76
RNF38-210ENST00000611646 TRADDQ15628 312 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 PTGISQ16647 500 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 ZNF699Q32M78 642 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 MMEL1Q495T6 779 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 HABP4Q5JVS0 413 aaKnown RBP4.05□□□□□ -1.76
RNF38-210ENST00000611646 CYP4A22Q5TCH4 519 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 FAM160B1Q5W0V3 765 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 PHLDB3Q6NSJ2 640 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 C4orf50Q6ZRC1 276 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 PDIK1LQ8N165 341 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 PRPF38AQ8NAV1 312 aaKnown RBP4.05□□□□□ -1.76
RNF38-210ENST00000611646 OR6B3Q8NGW1 331 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 CCDC124Q96CT7 223 aaKnown RBP4.05□□□□□ -1.76
RNF38-210ENST00000611646 SNF8Q96H20 258 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 TTC1Q99614 292 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 DUSP9Q99956 384 aaKnown RBP4.05□□□□□ -1.76
RNF38-210ENST00000611646 ACP6Q9NPH0 428 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 TOPORSQ9NS56 1045 aaPredicted RBP4.05□□□□□ -1.76
RNF38-210ENST00000611646 RNF146Q9NTX7 359 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 KBTBD4Q9NVX7 518 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 RBAKQ9NYW8 714 aaPredicted RBP4.05□□□□□ -1.76
RNF38-210ENST00000611646 AFG3L2Q9Y4W6 797 aa4.05□□□□□ -1.76
RNF38-210ENST00000611646 M0QYV0 167 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 CHUKO15111 745 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 MAPK13O15264 365 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 CREB3O43889 395 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 DIAPH2O60879 1101 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 CAND2O75155 1236 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 AKAP3O75969 853 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 TJP3O95049 919 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 SOX11P35716 441 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 CPA2P48052 419 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 USP11P51784 963 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 LMNB2Q03252 620 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 OVGP1Q12889 678 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 SEPT6Q14141 434 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 SPARCL1Q14515 664 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 SNRNP35Q16560 246 aaKnown RBP4.04□□□□□ -1.76
RNF38-210ENST00000611646 TPCN2Q8NHX9 752 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 ACER1Q8TDN7 264 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 SCFD1Q8WVM8 642 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 DHX38Q92620 1227 aaKnown RBP4.04□□□□□ -1.76
RNF38-210ENST00000611646 MCEEQ96PE7 176 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 LRRC37BQ96QE4 947 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 ERGIC2Q96RQ1 377 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 TRIM4Q9C037 500 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 IKZF4Q9H2S9 585 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 VIPAS39Q9H9C1 493 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 ATP6V0A4Q9HBG4 840 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 TXLNGQ9NUQ3 528 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 NAGPAQ9UK23 515 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 USP32Q8NFA0 1604 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 SSU72P8A0A1W2PR75 194 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 TMEM120BA0PK00 339 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 PALM3A6NDB9 673 aaPredicted RBP4.04□□□□□ -1.76
RNF38-210ENST00000611646 MIF4GDA9UHW6 222 aaKnown RBP4.04□□□□□ -1.76
RNF38-210ENST00000611646 WEE2P0C1S8 567 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 CDC25CP30307 473 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 RGS7P49802 495 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 RAD23BP54727 409 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 HMGCS2P54868 508 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 ARPP19P56211 112 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 PSMC1P62191 440 aaKnown RBP4.04□□□□□ -1.76
RNF38-210ENST00000611646 NOP14P78316 857 aaKnown RBP4.04□□□□□ -1.76
RNF38-210ENST00000611646 IL1RL1Q01638 556 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 KDSRQ06136 332 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 KCTD2Q14681 263 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 RPS6KA2Q15349 733 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 IL31Q6EBC2 164 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 BARGINQ6ZT62 677 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 MAP7D3Q8IWC1 876 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 LRRC34Q8IZ02 419 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 MMGT1Q8N4V1 131 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 FBXL13Q8NEE6 735 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 PPWD1Q96BP3 646 aaKnown RBP4.04□□□□□ -1.76
RNF38-210ENST00000611646 TRIM11Q96F44 468 aa4.04□□□□□ -1.76
RNF38-210ENST00000611646 XPO6Q96QU8 1125 aaKnown RBP4.04□□□□□ -1.76
RNF38-210ENST00000611646 CBWD1Q9BRT8 395 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms