RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 TTC4O95801 387 aa23.96■■□□□ 1.43
SHANK2-220ENST00000608988 MAPTP10636 758 aaKnown RBP23.96■■□□□ 1.43
SHANK2-220ENST00000608988 EPC2Q52LR7 807 aa23.96■■□□□ 1.43
SHANK2-220ENST00000608988 NUGGCQ68CJ6 796 aa23.96■■□□□ 1.43
SHANK2-220ENST00000608988 SLC51AQ86UW1 340 aa23.96■■□□□ 1.43
SHANK2-220ENST00000608988 GMCL1P1Q8NEA9 526 aa23.96■■□□□ 1.43
SHANK2-220ENST00000608988 UHMK1Q8TAS1 419 aaKnown RBP23.96■■□□□ 1.43
SHANK2-220ENST00000608988 SNF8Q96H20 258 aa23.96■■□□□ 1.43
SHANK2-220ENST00000608988 GMCL1Q96IK5 515 aa23.96■■□□□ 1.43
SHANK2-220ENST00000608988 DNAJC18Q9H819 358 aa23.96■■□□□ 1.43
SHANK2-220ENST00000608988 RGL1Q9NZL6 768 aa23.96■■□□□ 1.43
SHANK2-220ENST00000608988 KLHL14Q9P2G3 628 aa23.96■■□□□ 1.43
SHANK2-220ENST00000608988 GTF3C4Q9UKN8 822 aa23.96■■□□□ 1.43
SHANK2-220ENST00000608988 ADGRA3Q8IWK6 1321 aa23.96■■□□□ 1.43
SHANK2-220ENST00000608988 ANKRD63C9JTQ0 380 aa23.96■■□□□ 1.43
SHANK2-220ENST00000608988 SLITRK3O94933 977 aa23.96■■□□□ 1.43
SHANK2-220ENST00000608988 KCNQ4P56696 695 aa23.96■■□□□ 1.43
SHANK2-220ENST00000608988 IRX1P78414 480 aaPredicted RBP23.96■■□□□ 1.43
SHANK2-220ENST00000608988 STRN3Q13033 797 aa23.96■■□□□ 1.43
SHANK2-220ENST00000608988 MKRN4PQ13434 485 aaPredicted RBP23.96■■□□□ 1.43
SHANK2-220ENST00000608988 PTK6Q13882 451 aa23.96■■□□□ 1.43
SHANK2-220ENST00000608988 COG2Q14746 738 aa23.96■■□□□ 1.43
SHANK2-220ENST00000608988 OTOP1Q7RTM1 612 aa23.96■■□□□ 1.43
SHANK2-220ENST00000608988 BBOF1Q8ND07 529 aa23.96■■□□□ 1.43
SHANK2-220ENST00000608988 COA1Q9GZY4 146 aa23.96■■□□□ 1.43
SHANK2-220ENST00000608988 TXLNGQ9NUQ3 528 aa23.96■■□□□ 1.43
SHANK2-220ENST00000608988 LRRC37AA6NMS7 1700 aa23.95■■□□□ 1.43
SHANK2-220ENST00000608988 IGLV3-22A0A075B6J6 115 aa23.95■■□□□ 1.42
SHANK2-220ENST00000608988 CCDC189A1A4V9 331 aa23.95■■□□□ 1.42
SHANK2-220ENST00000608988 SFI1A8K8P3 1242 aa23.95■■□□□ 1.42
SHANK2-220ENST00000608988 KIF3CO14782 793 aa23.95■■□□□ 1.42
SHANK2-220ENST00000608988 LRRN2O75325 713 aa23.95■■□□□ 1.42
SHANK2-220ENST00000608988 EEF2P13639 858 aaKnown RBP23.95■■□□□ 1.42
SHANK2-220ENST00000608988 LONRF1Q17RB8 773 aa23.95■■□□□ 1.42
SHANK2-220ENST00000608988 KCTD19Q17RG1 926 aaPredicted RBP23.95■■□□□ 1.42
SHANK2-220ENST00000608988 CCDC38Q502W7 563 aa23.95■■□□□ 1.42
SHANK2-220ENST00000608988 UBAP2Q5T6F2 1119 aaKnown RBP23.95■■□□□ 1.42
SHANK2-220ENST00000608988 CHADLQ6NUI6 762 aa23.95■■□□□ 1.42
SHANK2-220ENST00000608988 CCDC25Q86WR0 208 aa23.95■■□□□ 1.42
SHANK2-220ENST00000608988 RIBC1Q8N443 379 aaPredicted RBP23.95■■□□□ 1.42
SHANK2-220ENST00000608988 ZNF564Q8TBZ8 553 aaPredicted RBP23.95■■□□□ 1.42
SHANK2-220ENST00000608988 AAASQ9NRG9 546 aa23.95■■□□□ 1.42
SHANK2-220ENST00000608988 LTBP1Q14766 1721 aa23.95■■□□□ 1.42
SHANK2-220ENST00000608988 PPP1R12AO14974 1030 aaPredicted RBP23.94■■□□□ 1.42
SHANK2-220ENST00000608988 SORBS3O60504 671 aa23.94■■□□□ 1.42
SHANK2-220ENST00000608988 PRELPP51888 382 aa23.94■■□□□ 1.42
SHANK2-220ENST00000608988 MCCD1P59942 119 aaPredicted RBP23.94■■□□□ 1.42
SHANK2-220ENST00000608988 SNRPFP62306 86 aaKnown RBP23.94■■□□□ 1.42
SHANK2-220ENST00000608988 MTFR1Q15390 333 aa23.94■■□□□ 1.42
SHANK2-220ENST00000608988 PARP6Q2NL67 630 aa23.94■■□□□ 1.42
SHANK2-220ENST00000608988 HHIPL2Q6UWX4 724 aa23.94■■□□□ 1.42
SHANK2-220ENST00000608988 BZW1Q7L1Q6 419 aaKnown RBP23.94■■□□□ 1.42
SHANK2-220ENST00000608988 FAM71AQ8IYT1 594 aa23.94■■□□□ 1.42
SHANK2-220ENST00000608988 FBF1Q8TES7 1133 aa23.94■■□□□ 1.42
SHANK2-220ENST00000608988 SLC5A5Q92911 643 aa23.94■■□□□ 1.42
SHANK2-220ENST00000608988 DYDC2Q96IM9 177 aa23.94■■□□□ 1.42
SHANK2-220ENST00000608988 CCDC77Q9BR77 488 aa23.94■■□□□ 1.42
SHANK2-220ENST00000608988 BCAS3Q9H6U6 928 aa23.94■■□□□ 1.42
SHANK2-220ENST00000608988 TMEM206Q9H813 350 aa23.94■■□□□ 1.42
SHANK2-220ENST00000608988 SLC5A4Q9NY91 659 aa23.94■■□□□ 1.42
SHANK2-220ENST00000608988 NKIRAS1Q9NYS0 192 aa23.94■■□□□ 1.42
SHANK2-220ENST00000608988 NOCTQ9UK39 431 aaKnown RBP23.94■■□□□ 1.42
SHANK2-220ENST00000608988 E7ENQ6 273 aa23.94■■□□□ 1.42
SHANK2-220ENST00000608988 PSMD10O75832 226 aa23.94■■□□□ 1.42
SHANK2-220ENST00000608988 KRT16P08779 473 aa23.94■■□□□ 1.42
SHANK2-220ENST00000608988 PAX7P23759 505 aa23.94■■□□□ 1.42
SHANK2-220ENST00000608988 GTF2IP78347 998 aa23.94■■□□□ 1.42
SHANK2-220ENST00000608988 KRT17Q04695 432 aa23.94■■□□□ 1.42
SHANK2-220ENST00000608988 ODR4Q5SWX8 454 aa23.94■■□□□ 1.42
SHANK2-220ENST00000608988 SYDE2Q5VT97 1194 aa23.94■■□□□ 1.42
SHANK2-220ENST00000608988 RELL1Q8IUW5 271 aa23.94■■□□□ 1.42
SHANK2-220ENST00000608988 TPH2Q8IWU9 490 aa23.94■■□□□ 1.42
SHANK2-220ENST00000608988 SYCP3Q8IZU3 236 aa23.94■■□□□ 1.42
SHANK2-220ENST00000608988 PIGOQ8TEQ8 1089 aa23.94■■□□□ 1.42
SHANK2-220ENST00000608988 PSPC1Q8WXF1 523 aaKnown RBP23.94■■□□□ 1.42
SHANK2-220ENST00000608988 THOC1Q96FV9 657 aaKnown RBP23.94■■□□□ 1.42
SHANK2-220ENST00000608988 FOXP3Q9BZS1 431 aa23.94■■□□□ 1.42
SHANK2-220ENST00000608988 POLLQ9UGP5 575 aa23.94■■□□□ 1.42
SHANK2-220ENST00000608988 L3MBTL1Q9Y468 752 aa23.94■■□□□ 1.42
SHANK2-220ENST00000608988 CHRNB2P17787 502 aa23.93■■□□□ 1.42
SHANK2-220ENST00000608988 STX2P32856 288 aa23.93■■□□□ 1.42
SHANK2-220ENST00000608988 VAMP7P51809 220 aa23.93■■□□□ 1.42
SHANK2-220ENST00000608988 PRR5LQ6MZQ0 368 aa23.93■■□□□ 1.42
SHANK2-220ENST00000608988 EMSYQ7Z589 1322 aa23.93■■□□□ 1.42
SHANK2-220ENST00000608988 TGS1Q96RS0 853 aaKnown RBP23.93■■□□□ 1.42
SHANK2-220ENST00000608988 DDX23Q9BUQ8 820 aaKnown RBP23.93■■□□□ 1.42
SHANK2-220ENST00000608988 NUP85Q9BW27 656 aa23.93■■□□□ 1.42
SHANK2-220ENST00000608988 PTPN22Q9Y2R2 807 aa23.93■■□□□ 1.42
SHANK2-220ENST00000608988 NEBLO76041 1014 aa23.92■■□□□ 1.42
SHANK2-220ENST00000608988 GAS8O95995 478 aa23.92■■□□□ 1.42
SHANK2-220ENST00000608988 BRAFP15056 766 aa23.92■■□□□ 1.42
SHANK2-220ENST00000608988 ATP2A2P16615 1042 aaKnown RBP23.92■■□□□ 1.42
SHANK2-220ENST00000608988 POLD1P28340 1107 aa23.92■■□□□ 1.42
SHANK2-220ENST00000608988 NR1H3Q13133 447 aa23.92■■□□□ 1.42
SHANK2-220ENST00000608988 LRRC14Q15048 493 aa23.92■■□□□ 1.42
SHANK2-220ENST00000608988 LRCH2Q5VUJ6 765 aa23.92■■□□□ 1.42
SHANK2-220ENST00000608988 ARHGEF19Q8IW93 802 aa23.92■■□□□ 1.42
SHANK2-220ENST00000608988 EPS8L1Q8TE68 723 aa23.92■■□□□ 1.42
SHANK2-220ENST00000608988 TRAIPQ9BWF2 469 aa23.92■■□□□ 1.42
SHANK2-220ENST00000608988 WDR11Q9BZH6 1224 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms