RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 FAM173BQ6P4H8 233 aa15.1■□□□□ 0.01
CTSA-218ENST00000607814 ZC3H14Q6PJT7 736 aaKnown RBP15.1■□□□□ 0.01
CTSA-218ENST00000607814 ZNF410Q86VK4 478 aa15.1■□□□□ 0.01
CTSA-218ENST00000607814 SIX5Q8N196 739 aa15.1■□□□□ 0.01
CTSA-218ENST00000607814 ERMNQ8TAM6 284 aa15.1■□□□□ 0.01
CTSA-218ENST00000607814 HELQQ8TDG4 1101 aa15.1■□□□□ 0.01
CTSA-218ENST00000607814 KCNG4Q8TDN1 519 aa15.1■□□□□ 0.01
CTSA-218ENST00000607814 SNX29Q8TEQ0 813 aa15.1■□□□□ 0.01
CTSA-218ENST00000607814 TRAIPQ9BWF2 469 aa15.1■□□□□ 0.01
CTSA-218ENST00000607814 POLR3FQ9H1D9 316 aaPredicted RBP15.1■□□□□ 0.01
CTSA-218ENST00000607814 TUFT1Q9NNX1 390 aa15.1■□□□□ 0.01
CTSA-218ENST00000607814 CHST12Q9NRB3 414 aa15.1■□□□□ 0.01
CTSA-218ENST00000607814 E9PMD0 336 aa15.09■□□□□ 0.01
CTSA-218ENST00000607814 DGAT1O75907 488 aa15.09■□□□□ 0.01
CTSA-218ENST00000607814 SKIP12755 728 aa15.09■□□□□ 0.01
CTSA-218ENST00000607814 SFPQP23246 707 aaKnown RBP eCLIP15.09■□□□□ 0.01
CTSA-218ENST00000607814 GLRA2P23416 452 aa15.09■□□□□ 0.01
CTSA-218ENST00000607814 RPA1P27694 616 aa15.09■□□□□ 0.01
CTSA-218ENST00000607814 ARL2P36404 184 aa15.09■□□□□ 0.01
CTSA-218ENST00000607814 CDC42EP1Q00587 391 aa15.09■□□□□ 0.01
CTSA-218ENST00000607814 ORC2Q13416 577 aaPredicted RBP15.09■□□□□ 0.01
CTSA-218ENST00000607814 CAPSQ13938 189 aa15.09■□□□□ 0.01
CTSA-218ENST00000607814 RILPL1Q5EBL4 403 aa15.09■□□□□ 0.01
CTSA-218ENST00000607814 TWF2Q6IBS0 349 aaKnown RBP15.09■□□□□ 0.01
CTSA-218ENST00000607814 TMC5Q6UXY8 1006 aa15.09■□□□□ 0.01
CTSA-218ENST00000607814 DTHD1Q6ZMT9 781 aa15.09■□□□□ 0.01
CTSA-218ENST00000607814 SPRYD3Q8NCJ5 442 aa15.09■□□□□ 0.01
CTSA-218ENST00000607814 TCP11Q8WWU5 503 aa15.09■□□□□ 0.01
CTSA-218ENST00000607814 IGSF21Q96ID5 467 aa15.09■□□□□ 0.01
CTSA-218ENST00000607814 CPB2Q96IY4 423 aa15.09■□□□□ 0.01
CTSA-218ENST00000607814 NACC1Q96RE7 527 aa15.09■□□□□ 0.01
CTSA-218ENST00000607814 DDX19AQ9NUU7 478 aaKnown RBP15.09■□□□□ 0.01
CTSA-218ENST00000607814 USP20Q9Y2K6 914 aa15.09■□□□□ 0.01
CTSA-218ENST00000607814 ARID2Q68CP9 1835 aa15.08■□□□□ 0.01
CTSA-218ENST00000607814 MED19A0JLT2 244 aaPredicted RBP15.08■□□□□ 0
CTSA-218ENST00000607814 VWA3AA6NCI4 1184 aa15.08■□□□□ 0
CTSA-218ENST00000607814 NT5C1B-RDH14C9J2C7 533 aa15.08■□□□□ 0
CTSA-218ENST00000607814 INO80B-WBP1J3KQ70 363 aa15.08■□□□□ 0
CTSA-218ENST00000607814 K7ELQ4 463 aaPredicted RBP15.08■□□□□ 0
CTSA-218ENST00000607814 PADI6Q6TGC4 694 aa15.08■□□□□ 0
CTSA-218ENST00000607814 CYP26C1Q6V0L0 522 aa15.08■□□□□ 0
CTSA-218ENST00000607814 CDR2LQ86X02 465 aaPredicted RBP15.08■□□□□ 0
CTSA-218ENST00000607814 IGSF22Q8N9C0 903 aa15.08■□□□□ 0
CTSA-218ENST00000607814 NXPE3Q969Y0 559 aa15.08■□□□□ 0
CTSA-218ENST00000607814 MMTAG2Q9BU76 263 aaKnown RBP15.08■□□□□ 0
CTSA-218ENST00000607814 RHOBTB2Q9BYZ6 727 aa15.08■□□□□ 0
CTSA-218ENST00000607814 INO80BQ9C086 356 aaPredicted RBP15.08■□□□□ 0
CTSA-218ENST00000607814 PPME1Q9Y570 386 aa15.08■□□□□ 0
CTSA-218ENST00000607814 ARHGEF35A5YM69 484 aa15.07■□□□□ 0
CTSA-218ENST00000607814 B4GALT5O43286 388 aa15.07■□□□□ 0
CTSA-218ENST00000607814 ZC3H11AO75152 810 aaKnown RBP eCLIP15.07■□□□□ 0
CTSA-218ENST00000607814 XRCC6P12956 609 aaKnown RBP eCLIP15.07■□□□□ 0
CTSA-218ENST00000607814 SYT1P21579 422 aa15.07■□□□□ 0
CTSA-218ENST00000607814 HOXA11P31270 313 aaPredicted RBP15.07■□□□□ 0
CTSA-218ENST00000607814 PHKA2P46019 1235 aa15.07■□□□□ 0
CTSA-218ENST00000607814 ATP2C1P98194 919 aaPredicted RBP15.07■□□□□ 0
CTSA-218ENST00000607814 GRIN1Q05586 938 aa15.07■□□□□ 0
CTSA-218ENST00000607814 PDIA5Q14554 519 aa15.07■□□□□ 0
CTSA-218ENST00000607814 PTPN14Q15678 1187 aa15.07■□□□□ 0
CTSA-218ENST00000607814 KANK3Q6NY19 840 aa15.07■□□□□ 0
CTSA-218ENST00000607814 KCNK18Q7Z418 384 aa15.07■□□□□ 0
CTSA-218ENST00000607814 TMEM173Q86WV6 379 aaPredicted RBP15.07■□□□□ 0
CTSA-218ENST00000607814 EXOC8Q8IYI6 725 aa15.07■□□□□ 0
CTSA-218ENST00000607814 CMASQ8NFW8 434 aaPredicted RBP15.07■□□□□ 0
CTSA-218ENST00000607814 AUTS2Q8WXX7 1259 aa15.07■□□□□ 0
CTSA-218ENST00000607814 BSNDQ8WZ55 320 aa15.07■□□□□ 0
CTSA-218ENST00000607814 EMILIN2Q9BXX0 1053 aa15.07■□□□□ 0
CTSA-218ENST00000607814 BHMT2Q9H2M3 363 aa15.07■□□□□ 0
CTSA-218ENST00000607814 DLL3Q9NYJ7 618 aa15.07■□□□□ 0
CTSA-218ENST00000607814 LRRIQ4A6NIV6 560 aa15.06■□□□□ 0
CTSA-218ENST00000607814 SPDYE4A6NLX3 237 aa15.06■□□□□ 0
CTSA-218ENST00000607814 ASAP2O43150 1006 aa15.06■□□□□ 0
CTSA-218ENST00000607814 GALTP07902 379 aa15.06■□□□□ 0
CTSA-218ENST00000607814 LIG1P18858 919 aa15.06■□□□□ 0
CTSA-218ENST00000607814 CLCN4P51793 760 aa15.06■□□□□ 0
CTSA-218ENST00000607814 AFF1P51825 1210 aaKnown RBP15.06■□□□□ 0
CTSA-218ENST00000607814 PTENP60484 403 aa15.06■□□□□ 0
CTSA-218ENST00000607814 CEBPZQ03701 1054 aaKnown RBP15.06■□□□□ 0
CTSA-218ENST00000607814 UBXN11Q5T124 520 aa15.06■□□□□ 0
CTSA-218ENST00000607814 FOXD4L5Q5VV16 416 aaPredicted RBP15.06■□□□□ 0
CTSA-218ENST00000607814 KRT79Q5XKE5 535 aa15.06■□□□□ 0
CTSA-218ENST00000607814 HAUS3Q68CZ6 603 aa15.06■□□□□ 0
CTSA-218ENST00000607814 PHLDB3Q6NSJ2 640 aa15.06■□□□□ 0
CTSA-218ENST00000607814 GLB1LQ6UWU2 654 aa15.06■□□□□ 0
CTSA-218ENST00000607814 SRGAP1Q7Z6B7 1085 aa15.06■□□□□ 0
CTSA-218ENST00000607814 KIAA2013Q8IYS2 634 aa15.06■□□□□ 0
CTSA-218ENST00000607814 FOXD4L4Q8WXT5 416 aaPredicted RBP15.06■□□□□ 0
CTSA-218ENST00000607814 RUBCNQ92622 972 aa15.06■□□□□ 0
CTSA-218ENST00000607814 STAMQ92783 540 aa15.06■□□□□ 0
CTSA-218ENST00000607814 BORCS6Q96GS4 357 aa15.06■□□□□ 0
CTSA-218ENST00000607814 KIFC3Q9BVG8 833 aa15.06■□□□□ 0
CTSA-218ENST00000607814 EIF2AQ9BY44 585 aaKnown RBP15.06■□□□□ 0
CTSA-218ENST00000607814 AGPAT5Q9NUQ2 364 aa15.06■□□□□ 0
CTSA-218ENST00000607814 FAM105AQ9NUU6 356 aa15.06■□□□□ 0
CTSA-218ENST00000607814 DPP7Q9UHL4 492 aa15.06■□□□□ 0
CTSA-218ENST00000607814 INPP5FQ9Y2H2 1132 aa15.06■□□□□ 0
CTSA-218ENST00000607814 CLIC4Q9Y696 253 aa15.06■□□□□ 0
CTSA-218ENST00000607814 SPTBN2O15020 2390 aa15.06■□□□□ 0
CTSA-218ENST00000607814 GPR179Q6PRD1 2367 aa15.06■□□□□ 0
CTSA-218ENST00000607814 TTLL13PA6NNM8 815 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms