RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 MYH9P35579 1960 aaKnown RBP16.73■□□□□ 0.27
SSBP4-214ENST00000607020 ACACBO00763 2458 aa16.72■□□□□ 0.27
SSBP4-214ENST00000607020 M0R2N6 131 aa16.72■□□□□ 0.27
SSBP4-214ENST00000607020 TDP2O95551 362 aa16.72■□□□□ 0.27
SSBP4-214ENST00000607020 P4HBP07237 508 aaKnown RBP16.72■□□□□ 0.27
SSBP4-214ENST00000607020 HNRNPA1P09651 372 aaKnown RBP eCLIP16.72■□□□□ 0.27
SSBP4-214ENST00000607020 MYBP10242 640 aa16.72■□□□□ 0.27
SSBP4-214ENST00000607020 FSHRP23945 695 aa16.72■□□□□ 0.27
SSBP4-214ENST00000607020 NLRP5P59047 1200 aa16.72■□□□□ 0.27
SSBP4-214ENST00000607020 POU5F1BQ06416 359 aa16.72■□□□□ 0.27
SSBP4-214ENST00000607020 PPP2R5CQ13362 524 aa16.72■□□□□ 0.27
SSBP4-214ENST00000607020 SLC44A4Q53GD3 710 aa16.72■□□□□ 0.27
SSBP4-214ENST00000607020 PARM1Q6UWI2 310 aa16.72■□□□□ 0.27
SSBP4-214ENST00000607020 Q6ZUG5 572 aa16.72■□□□□ 0.27
SSBP4-214ENST00000607020 ZNF579Q8NAF0 562 aaKnown RBP16.72■□□□□ 0.27
SSBP4-214ENST00000607020 RNF149Q8NC42 400 aa16.72■□□□□ 0.27
SSBP4-214ENST00000607020 TCP11Q8WWU5 503 aa16.72■□□□□ 0.27
SSBP4-214ENST00000607020 FGF14Q92915 247 aa16.72■□□□□ 0.27
SSBP4-214ENST00000607020 BRF1Q92994 677 aa16.72■□□□□ 0.27
SSBP4-214ENST00000607020 TMEM143Q96AN5 459 aa16.72■□□□□ 0.27
SSBP4-214ENST00000607020 CEP170P1Q96L14 293 aa16.72■□□□□ 0.27
SSBP4-214ENST00000607020 CSRNP2Q9H175 543 aa16.72■□□□□ 0.27
SSBP4-214ENST00000607020 PCDHA4Q9UN74 947 aa16.72■□□□□ 0.27
SSBP4-214ENST00000607020 PRR5-ARHGAP8B1AHC4 643 aa16.71■□□□□ 0.27
SSBP4-214ENST00000607020 F8W810 466 aa16.71■□□□□ 0.27
SSBP4-214ENST00000607020 EML1O00423 815 aa16.71■□□□□ 0.27
SSBP4-214ENST00000607020 LAMTOR5O43504 91 aa16.71■□□□□ 0.27
SSBP4-214ENST00000607020 LILRB5O75023 590 aa16.71■□□□□ 0.27
SSBP4-214ENST00000607020 LRRN2O75325 713 aa16.71■□□□□ 0.27
SSBP4-214ENST00000607020 MLH1P40692 756 aa16.71■□□□□ 0.27
SSBP4-214ENST00000607020 SCNN1GP51170 649 aa16.71■□□□□ 0.27
SSBP4-214ENST00000607020 EVCP57679 992 aa16.71■□□□□ 0.27
SSBP4-214ENST00000607020 PTENP60484 403 aa16.71■□□□□ 0.27
SSBP4-214ENST00000607020 ARHGAP8P85298 464 aa16.71■□□□□ 0.27
SSBP4-214ENST00000607020 FUT10Q6P4F1 479 aa16.71■□□□□ 0.27
SSBP4-214ENST00000607020 NOTUMQ6P988 496 aa16.71■□□□□ 0.27
SSBP4-214ENST00000607020 MTSS1LQ765P7 747 aa16.71■□□□□ 0.27
SSBP4-214ENST00000607020 FERMT3Q86UX7 667 aa16.71■□□□□ 0.27
SSBP4-214ENST00000607020 IFNLR1Q8IU57 520 aaPredicted RBP16.71■□□□□ 0.27
SSBP4-214ENST00000607020 C4orf19Q8IY42 314 aa16.71■□□□□ 0.27
SSBP4-214ENST00000607020 FAM177A1Q8N128 213 aaPredicted RBP16.71■□□□□ 0.27
SSBP4-214ENST00000607020 GSTCDQ8NEC7 633 aa16.71■□□□□ 0.27
SSBP4-214ENST00000607020 FAM20AQ96MK3 541 aa16.71■□□□□ 0.27
SSBP4-214ENST00000607020 SLC26A6Q9BXS9 759 aa16.71■□□□□ 0.27
SSBP4-214ENST00000607020 EIF2AQ9BY44 585 aaKnown RBP16.71■□□□□ 0.27
SSBP4-214ENST00000607020 ADAM28Q9UKQ2 775 aa16.71■□□□□ 0.27
SSBP4-214ENST00000607020 ZMYM2Q9UBW7 1377 aa16.7■□□□□ 0.26
SSBP4-214ENST00000607020 TSPAN1O60635 241 aa16.7■□□□□ 0.26
SSBP4-214ENST00000607020 KRT37O76014 449 aa16.7■□□□□ 0.26
SSBP4-214ENST00000607020 ERLIN2O94905 339 aa16.7■□□□□ 0.26
SSBP4-214ENST00000607020 POU2F2P09086 479 aa16.7■□□□□ 0.26
SSBP4-214ENST00000607020 HOXA9P31269 272 aa16.7■□□□□ 0.26
SSBP4-214ENST00000607020 ATXN1P54253 815 aaKnown RBP16.7■□□□□ 0.26
SSBP4-214ENST00000607020 PFKPQ01813 784 aa16.7■□□□□ 0.26
SSBP4-214ENST00000607020 NCBP1Q09161 790 aaKnown RBP16.7■□□□□ 0.26
SSBP4-214ENST00000607020 SNW1Q13573 536 aaKnown RBP16.7■□□□□ 0.26
SSBP4-214ENST00000607020 MLF2Q15773 248 aaPredicted RBP16.7■□□□□ 0.26
SSBP4-214ENST00000607020 BMP2KLQ5H9B9 411 aa16.7■□□□□ 0.26
SSBP4-214ENST00000607020 DAGLBQ8NCG7 672 aa16.7■□□□□ 0.26
SSBP4-214ENST00000607020 ATRIPQ8WXE1 791 aa16.7■□□□□ 0.26
SSBP4-214ENST00000607020 CLDN23Q96B33 292 aa16.7■□□□□ 0.26
SSBP4-214ENST00000607020 ZFP42Q96MM3 310 aa16.7■□□□□ 0.26
SSBP4-214ENST00000607020 NELL2Q99435 816 aa16.7■□□□□ 0.26
SSBP4-214ENST00000607020 EPC1Q9H2F5 836 aa16.7■□□□□ 0.26
SSBP4-214ENST00000607020 SPATA6Q9NWH7 488 aaPredicted RBP16.7■□□□□ 0.26
SSBP4-214ENST00000607020 ZSCAN32Q9NX65 697 aa16.7■□□□□ 0.26
SSBP4-214ENST00000607020 WRAP73Q9P2S5 460 aaPredicted RBP16.7■□□□□ 0.26
SSBP4-214ENST00000607020 NCDNQ9UBB6 729 aa16.7■□□□□ 0.26
SSBP4-214ENST00000607020 FBXW11Q9UKB1 542 aa16.7■□□□□ 0.26
SSBP4-214ENST00000607020 VAV3Q9UKW4 847 aa16.7■□□□□ 0.26
SSBP4-214ENST00000607020 FAM170BA6NMN3 283 aa16.69■□□□□ 0.26
SSBP4-214ENST00000607020 LMNB2Q03252 620 aa16.69■□□□□ 0.26
SSBP4-214ENST00000607020 MXD4Q14582 209 aaPredicted RBP16.69■□□□□ 0.26
SSBP4-214ENST00000607020 GALNT17Q6IS24 598 aa16.69■□□□□ 0.26
SSBP4-214ENST00000607020 OTUD6AQ7L8S5 288 aa16.69■□□□□ 0.26
SSBP4-214ENST00000607020 GRASPQ7Z6J2 395 aaPredicted RBP16.69■□□□□ 0.26
SSBP4-214ENST00000607020 SKAP1Q86WV1 359 aa16.69■□□□□ 0.26
SSBP4-214ENST00000607020 HACE1Q8IYU2 909 aa16.69■□□□□ 0.26
SSBP4-214ENST00000607020 SECISBP2LQ93073 1101 aaKnown RBP16.69■□□□□ 0.26
SSBP4-214ENST00000607020 B3GALT6Q96L58 329 aa16.69■□□□□ 0.26
SSBP4-214ENST00000607020 KCNMB3Q9NPA1 279 aa16.69■□□□□ 0.26
SSBP4-214ENST00000607020 LTB4R2Q9NPC1 389 aa16.69■□□□□ 0.26
SSBP4-214ENST00000607020 DDX25Q9UHL0 483 aaKnown RBP16.69■□□□□ 0.26
SSBP4-214ENST00000607020 MTF2Q9Y483 593 aaPredicted RBP16.69■□□□□ 0.26
SSBP4-214ENST00000607020 HES2Q9Y543 173 aa16.69■□□□□ 0.26
SSBP4-214ENST00000607020 CACNA1IQ9P0X4 2223 aa16.69■□□□□ 0.26
SSBP4-214ENST00000607020 KMT2BQ9UMN6 2715 aaPredicted RBP16.68■□□□□ 0.26
SSBP4-214ENST00000607020 TBC1D4O60343 1298 aa16.68■□□□□ 0.26
SSBP4-214ENST00000607020 CPA1P15085 419 aa16.68■□□□□ 0.26
SSBP4-214ENST00000607020 RPL17P18621 184 aaKnown RBP16.68■□□□□ 0.26
SSBP4-214ENST00000607020 TGM1P22735 817 aa16.68■□□□□ 0.26
SSBP4-214ENST00000607020 YWHABP31946 246 aaKnown RBP16.68■□□□□ 0.26
SSBP4-214ENST00000607020 RPS9P46781 194 aaKnown RBP16.68■□□□□ 0.26
SSBP4-214ENST00000607020 CSTF1Q05048 431 aaKnown RBP16.68■□□□□ 0.26
SSBP4-214ENST00000607020 EMC2Q15006 297 aa16.68■□□□□ 0.26
SSBP4-214ENST00000607020 EPHA7Q15375 998 aa16.68■□□□□ 0.26
SSBP4-214ENST00000607020 NPY5RQ15761 445 aa16.68■□□□□ 0.26
SSBP4-214ENST00000607020 AMHR2Q16671 573 aa16.68■□□□□ 0.26
SSBP4-214ENST00000607020 RTL10Q7L3V2 364 aa16.68■□□□□ 0.26
SSBP4-214ENST00000607020 BLIDQ8IZY5 108 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms