RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 TCHPQ9BT92 498 aa18.21■□□□□ 0.51
LINC00240-203ENST00000606878 IGFLR1Q9H665 355 aa18.21■□□□□ 0.51
LINC00240-203ENST00000606878 TLE6Q9H808 572 aa18.21■□□□□ 0.51
LINC00240-203ENST00000606878 UBE2ZQ9H832 354 aaPredicted RBP18.21■□□□□ 0.51
LINC00240-203ENST00000606878 NGRNQ9NPE2 291 aaKnown RBP18.21■□□□□ 0.51
LINC00240-203ENST00000606878 RALGAPA2Q2PPJ7 1873 aa18.2■□□□□ 0.5
LINC00240-203ENST00000606878 A0A0C4DFX4 3053 aa18.2■□□□□ 0.5
LINC00240-203ENST00000606878 SCP2P22307 547 aa18.2■□□□□ 0.5
LINC00240-203ENST00000606878 HYAL1Q12794 435 aa18.2■□□□□ 0.5
LINC00240-203ENST00000606878 PKP1Q13835 747 aa18.2■□□□□ 0.5
LINC00240-203ENST00000606878 EEF1DP3Q658K8 133 aa18.2■□□□□ 0.5
LINC00240-203ENST00000606878 TMC7Q7Z402 723 aa18.2■□□□□ 0.5
LINC00240-203ENST00000606878 TMEM161BQ8NDZ6 487 aa18.2■□□□□ 0.5
LINC00240-203ENST00000606878 IGSF21Q96ID5 467 aa18.2■□□□□ 0.5
LINC00240-203ENST00000606878 ZFP42Q96MM3 310 aa18.2■□□□□ 0.5
LINC00240-203ENST00000606878 TCF25Q9BQ70 676 aa18.2■□□□□ 0.5
LINC00240-203ENST00000606878 TARS2Q9BW92 718 aaKnown RBP18.2■□□□□ 0.5
LINC00240-203ENST00000606878 ZHX3Q9H4I2 956 aa18.2■□□□□ 0.5
LINC00240-203ENST00000606878 PARVGQ9HBI0 331 aa18.2■□□□□ 0.5
LINC00240-203ENST00000606878 MIOSQ9NXC5 875 aa18.2■□□□□ 0.5
LINC00240-203ENST00000606878 SNTG2Q9NY99 539 aa18.2■□□□□ 0.5
LINC00240-203ENST00000606878 KLK14Q9P0G3 267 aa18.2■□□□□ 0.5
LINC00240-203ENST00000606878 DNAJB4Q9UDY4 337 aa18.2■□□□□ 0.5
LINC00240-203ENST00000606878 TTC28Q96AY4 2481 aa18.2■□□□□ 0.5
LINC00240-203ENST00000606878 CUL9Q8IWT3 2517 aa18.19■□□□□ 0.5
LINC00240-203ENST00000606878 DLL1O00548 723 aa18.19■□□□□ 0.5
LINC00240-203ENST00000606878 FSCN2O14926 492 aa18.19■□□□□ 0.5
LINC00240-203ENST00000606878 CUTAO60888 179 aa18.19■□□□□ 0.5
LINC00240-203ENST00000606878 TBCAO75347 108 aaKnown RBP18.19■□□□□ 0.5
LINC00240-203ENST00000606878 EDN1P05305 212 aa18.19■□□□□ 0.5
LINC00240-203ENST00000606878 KCNA5P22460 613 aa18.19■□□□□ 0.5
LINC00240-203ENST00000606878 STAT6P42226 847 aa18.19■□□□□ 0.5
LINC00240-203ENST00000606878 SLC11A1P49279 550 aa18.19■□□□□ 0.5
LINC00240-203ENST00000606878 SCNN1GP51170 649 aa18.19■□□□□ 0.5
LINC00240-203ENST00000606878 DDX53Q86TM3 631 aaKnown RBP18.19■□□□□ 0.5
LINC00240-203ENST00000606878 RBM23Q86U06 439 aaKnown RBP18.19■□□□□ 0.5
LINC00240-203ENST00000606878 NLRC5Q86WI3 1866 aa18.19■□□□□ 0.5
LINC00240-203ENST00000606878 KCNG4Q8TDN1 519 aa18.19■□□□□ 0.5
LINC00240-203ENST00000606878 RPS6KC1Q96S38 1066 aa18.19■□□□□ 0.5
LINC00240-203ENST00000606878 ENTPD7Q9NQZ7 604 aa18.19■□□□□ 0.5
LINC00240-203ENST00000606878 CLDND1Q9NY35 253 aa18.19■□□□□ 0.5
LINC00240-203ENST00000606878 STK39Q9UEW8 545 aa18.19■□□□□ 0.5
LINC00240-203ENST00000606878 PRUNE2Q8WUY3 3088 aa18.18■□□□□ 0.5
LINC00240-203ENST00000606878 TRAK2O60296 914 aa18.18■□□□□ 0.5
LINC00240-203ENST00000606878 CXCL14O95715 111 aa18.18■□□□□ 0.5
LINC00240-203ENST00000606878 MAPTP10636 758 aaKnown RBP18.18■□□□□ 0.5
LINC00240-203ENST00000606878 NRIP1P48552 1158 aa18.18■□□□□ 0.5
LINC00240-203ENST00000606878 ZNF131P52739 623 aa18.18■□□□□ 0.5
LINC00240-203ENST00000606878 ADAM15Q13444 863 aa18.18■□□□□ 0.5
LINC00240-203ENST00000606878 COL19A1Q14993 1142 aa18.18■□□□□ 0.5
LINC00240-203ENST00000606878 TAS1R3Q7RTX0 852 aa18.18■□□□□ 0.5
LINC00240-203ENST00000606878 HAUS6Q7Z4H7 955 aa18.18■□□□□ 0.5
LINC00240-203ENST00000606878 COLGALT2Q8IYK4 626 aa18.18■□□□□ 0.5
LINC00240-203ENST00000606878 GSTCDQ8NEC7 633 aa18.18■□□□□ 0.5
LINC00240-203ENST00000606878 COLEC11Q9BWP8 271 aa18.18■□□□□ 0.5
LINC00240-203ENST00000606878 PTPRHQ9HD43 1115 aa18.18■□□□□ 0.5
LINC00240-203ENST00000606878 RCOR1Q9UKL0 485 aa18.18■□□□□ 0.5
LINC00240-203ENST00000606878 GDAQ9Y2T3 454 aa18.18■□□□□ 0.5
LINC00240-203ENST00000606878 ZMYM2Q9UBW7 1377 aa18.17■□□□□ 0.5
LINC00240-203ENST00000606878 NRP1O14786 923 aa18.17■□□□□ 0.5
LINC00240-203ENST00000606878 BRD1O95696 1058 aa18.17■□□□□ 0.5
LINC00240-203ENST00000606878 BMP1P13497 986 aa18.17■□□□□ 0.5
LINC00240-203ENST00000606878 ABCD1P33897 745 aa18.17■□□□□ 0.5
LINC00240-203ENST00000606878 OR1G1P47890 313 aa18.17■□□□□ 0.5
LINC00240-203ENST00000606878 ME1P48163 572 aa18.17■□□□□ 0.5
LINC00240-203ENST00000606878 NCKAP1LP55160 1127 aa18.17■□□□□ 0.5
LINC00240-203ENST00000606878 DNM1Q05193 864 aaKnown RBP18.17■□□□□ 0.5
LINC00240-203ENST00000606878 SMC1AQ14683 1233 aaKnown RBP18.17■□□□□ 0.5
LINC00240-203ENST00000606878 CTC1Q2NKJ3 1217 aa18.17■□□□□ 0.5
LINC00240-203ENST00000606878 LEXMQ3ZCV2 418 aa18.17■□□□□ 0.5
LINC00240-203ENST00000606878 PLPP4Q5VZY2 271 aa18.17■□□□□ 0.5
LINC00240-203ENST00000606878 ZPBP2Q6X784 338 aa18.17■□□□□ 0.5
LINC00240-203ENST00000606878 DYMQ7RTS9 669 aa18.17■□□□□ 0.5
LINC00240-203ENST00000606878 ZBTB33Q86T24 672 aa18.17■□□□□ 0.5
LINC00240-203ENST00000606878 VPS52Q8N1B4 723 aa18.17■□□□□ 0.5
LINC00240-203ENST00000606878 PDILTQ8N807 584 aa18.17■□□□□ 0.5
LINC00240-203ENST00000606878 MRPL43Q8N983 215 aaKnown RBP18.17■□□□□ 0.5
LINC00240-203ENST00000606878 TMEM87AQ8NBN3 555 aa18.17■□□□□ 0.5
LINC00240-203ENST00000606878 CDCA3Q99618 268 aaPredicted RBP18.17■□□□□ 0.5
LINC00240-203ENST00000606878 CCDC94Q9BW85 323 aaPredicted RBP18.17■□□□□ 0.5
LINC00240-203ENST00000606878 PCDHGC5Q9Y5F6 944 aa18.17■□□□□ 0.5
LINC00240-203ENST00000606878 COL4A4P53420 1690 aaPredicted RBP18.16■□□□□ 0.5
LINC00240-203ENST00000606878 NCOR1O75376 2440 aa18.16■□□□□ 0.5
LINC00240-203ENST00000606878 FSD2A1L4K1 749 aa18.16■□□□□ 0.5
LINC00240-203ENST00000606878 PER2O15055 1255 aa18.16■□□□□ 0.5
LINC00240-203ENST00000606878 B4GALT3O60512 393 aa18.16■□□□□ 0.5
LINC00240-203ENST00000606878 TOM1L1O75674 476 aa18.16■□□□□ 0.5
LINC00240-203ENST00000606878 RECQL4O94761 1208 aa18.16■□□□□ 0.5
LINC00240-203ENST00000606878 THP07101 528 aa18.16■□□□□ 0.5
LINC00240-203ENST00000606878 MCF2P10911 925 aa18.16■□□□□ 0.5
LINC00240-203ENST00000606878 GTF2F1P35269 517 aaKnown RBP eCLIP18.16■□□□□ 0.5
LINC00240-203ENST00000606878 KCNQ1P51787 676 aa18.16■□□□□ 0.5
LINC00240-203ENST00000606878 YARSP54577 528 aaKnown RBP18.16■□□□□ 0.5
LINC00240-203ENST00000606878 DSC1Q08554 894 aa18.16■□□□□ 0.5
LINC00240-203ENST00000606878 GRIK3Q13003 919 aa18.16■□□□□ 0.5
LINC00240-203ENST00000606878 PUS10Q3MIT2 529 aaKnown RBP18.16■□□□□ 0.5
LINC00240-203ENST00000606878 ZNF568Q3ZCX4 644 aa18.16■□□□□ 0.5
LINC00240-203ENST00000606878 MPZL3Q6UWV2 235 aa18.16■□□□□ 0.5
LINC00240-203ENST00000606878 ADGRD2Q7Z7M1 963 aa18.16■□□□□ 0.5
LINC00240-203ENST00000606878 TMEM173Q86WV6 379 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms