RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 ZXDAP98168 799 aa14.76□□□□□ -0.05
CTSA-213ENST00000606782 FOXD4L5Q5VV16 416 aaPredicted RBP14.76□□□□□ -0.05
CTSA-213ENST00000606782 HAUS3Q68CZ6 603 aa14.76□□□□□ -0.05
CTSA-213ENST00000606782 CES5AQ6NT32 575 aa14.76□□□□□ -0.05
CTSA-213ENST00000606782 POTEGQ6S5H5 508 aa14.76□□□□□ -0.05
CTSA-213ENST00000606782 PADI6Q6TGC4 694 aa14.76□□□□□ -0.05
CTSA-213ENST00000606782 HACE1Q8IYU2 909 aa14.76□□□□□ -0.05
CTSA-213ENST00000606782 IGSF22Q8N9C0 903 aa14.76□□□□□ -0.05
CTSA-213ENST00000606782 FOXD4L4Q8WXT5 416 aaPredicted RBP14.76□□□□□ -0.05
CTSA-213ENST00000606782 FAM122AQ96E09 287 aa14.76□□□□□ -0.05
CTSA-213ENST00000606782 KLHL5Q96PQ7 755 aa14.76□□□□□ -0.05
CTSA-213ENST00000606782 KCNH6Q9H252 994 aa14.76□□□□□ -0.05
CTSA-213ENST00000606782 MARCH5Q9NX47 278 aa14.76□□□□□ -0.05
CTSA-213ENST00000606782 STK24Q9Y6E0 443 aa14.76□□□□□ -0.05
CTSA-213ENST00000606782 LAD1O00515 517 aa14.75□□□□□ -0.05
CTSA-213ENST00000606782 C1RP00736 705 aa14.75□□□□□ -0.05
CTSA-213ENST00000606782 MLH1P40692 756 aa14.75□□□□□ -0.05
CTSA-213ENST00000606782 MTHFRP42898 656 aa14.75□□□□□ -0.05
CTSA-213ENST00000606782 NBR1Q14596 966 aa14.75□□□□□ -0.05
CTSA-213ENST00000606782 ECM1Q16610 540 aa14.75□□□□□ -0.05
CTSA-213ENST00000606782 ATL3Q6DD88 541 aa14.75□□□□□ -0.05
CTSA-213ENST00000606782 TRIM67Q6ZTA4 783 aa14.75□□□□□ -0.05
CTSA-213ENST00000606782 HFE2Q6ZVN8 426 aa14.75□□□□□ -0.05
CTSA-213ENST00000606782 GPR65Q8IYL9 337 aa14.75□□□□□ -0.05
CTSA-213ENST00000606782 BSNDQ8WZ55 320 aa14.75□□□□□ -0.05
CTSA-213ENST00000606782 ZFP42Q96MM3 310 aa14.75□□□□□ -0.05
CTSA-213ENST00000606782 HERC2P3Q9BVR0 1158 aa14.75□□□□□ -0.05
CTSA-213ENST00000606782 EMILIN2Q9BXX0 1053 aa14.75□□□□□ -0.05
CTSA-213ENST00000606782 CCDC113Q9H0I3 377 aa14.75□□□□□ -0.05
CTSA-213ENST00000606782 C2orf40Q9H1Z8 148 aa14.75□□□□□ -0.05
CTSA-213ENST00000606782 NXF3Q9H4D5 531 aaKnown RBP14.75□□□□□ -0.05
CTSA-213ENST00000606782 CHMP5Q9NZZ3 219 aa14.75□□□□□ -0.05
CTSA-213ENST00000606782 SSX2IPQ9Y2D8 614 aa14.75□□□□□ -0.05
CTSA-213ENST00000606782 ARHGEF35A5YM69 484 aa14.74□□□□□ -0.05
CTSA-213ENST00000606782 LRRIQ4A6NIV6 560 aa14.74□□□□□ -0.05
CTSA-213ENST00000606782 ACKR2O00590 384 aa14.74□□□□□ -0.05
CTSA-213ENST00000606782 CNPP09543 421 aaKnown RBP14.74□□□□□ -0.05
CTSA-213ENST00000606782 EPCAMP16422 314 aa14.74□□□□□ -0.05
CTSA-213ENST00000606782 PRPHP41219 470 aa14.74□□□□□ -0.05
CTSA-213ENST00000606782 NAMPTP43490 491 aa14.74□□□□□ -0.05
CTSA-213ENST00000606782 SCNN1GP51170 649 aa14.74□□□□□ -0.05
CTSA-213ENST00000606782 CLCN4P51793 760 aa14.74□□□□□ -0.05
CTSA-213ENST00000606782 PTGDRQ13258 359 aa14.74□□□□□ -0.05
CTSA-213ENST00000606782 KIAA0319Q5VV43 1072 aa14.74□□□□□ -0.05
CTSA-213ENST00000606782 KIAA1841Q6NSI8 718 aa14.74□□□□□ -0.05
CTSA-213ENST00000606782 MAEAQ7L5Y9 396 aa14.74□□□□□ -0.05
CTSA-213ENST00000606782 ZBTB8OSQ8IWT0 167 aa14.74□□□□□ -0.05
CTSA-213ENST00000606782 TMEM87AQ8NBN3 555 aa14.74□□□□□ -0.05
CTSA-213ENST00000606782 MFSD14AQ96MC6 490 aa14.74□□□□□ -0.05
CTSA-213ENST00000606782 RIPOR3Q96MK2 946 aa14.74□□□□□ -0.05
CTSA-213ENST00000606782 RPS6KC1Q96S38 1066 aa14.74□□□□□ -0.05
CTSA-213ENST00000606782 APOL5Q9BWW9 433 aa14.74□□□□□ -0.05
CTSA-213ENST00000606782 TRIM6Q9C030 488 aaPredicted RBP14.74□□□□□ -0.05
CTSA-213ENST00000606782 POMKQ9H5K3 350 aa14.74□□□□□ -0.05
CTSA-213ENST00000606782 RXFP1Q9HBX9 757 aa14.74□□□□□ -0.05
CTSA-213ENST00000606782 MRPL17Q9NRX2 175 aaKnown RBP14.74□□□□□ -0.05
CTSA-213ENST00000606782 CHST7Q9NS84 486 aa14.74□□□□□ -0.05
CTSA-213ENST00000606782 LRWD1Q9UFC0 647 aa14.74□□□□□ -0.05
CTSA-213ENST00000606782 NR2E1Q9Y466 385 aa14.74□□□□□ -0.05
CTSA-213ENST00000606782 MYO10Q9HD67 2058 aa14.73□□□□□ -0.05
CTSA-213ENST00000606782 TDRD15B5MCY1 1934 aaKnown RBP14.73□□□□□ -0.05
CTSA-213ENST00000606782 NR1I2O75469 434 aa14.73□□□□□ -0.05
CTSA-213ENST00000606782 PAPLNO95428 1278 aa14.73□□□□□ -0.05
CTSA-213ENST00000606782 NPTXRO95502 500 aa14.73□□□□□ -0.05
CTSA-213ENST00000606782 CCT6AP40227 531 aaKnown RBP14.73□□□□□ -0.05
CTSA-213ENST00000606782 OR1G1P47890 313 aa14.73□□□□□ -0.05
CTSA-213ENST00000606782 DSG1Q02413 1049 aa14.73□□□□□ -0.05
CTSA-213ENST00000606782 SIGLEC14Q08ET2 396 aa14.73□□□□□ -0.05
CTSA-213ENST00000606782 GRIK3Q13003 919 aa14.73□□□□□ -0.05
CTSA-213ENST00000606782 PPP2R5AQ15172 486 aa14.73□□□□□ -0.05
CTSA-213ENST00000606782 PTPAQ15257 358 aa14.73□□□□□ -0.05
CTSA-213ENST00000606782 MAPK6Q16659 721 aa14.73□□□□□ -0.05
CTSA-213ENST00000606782 PTPN21Q16825 1174 aa14.73□□□□□ -0.05
CTSA-213ENST00000606782 ATAT1Q5SQI0 421 aa14.73□□□□□ -0.05
CTSA-213ENST00000606782 TAS1R1Q7RTX1 841 aa14.73□□□□□ -0.05
CTSA-213ENST00000606782 CDR2LQ86X02 465 aaPredicted RBP14.73□□□□□ -0.05
CTSA-213ENST00000606782 KIFAP3Q92845 792 aa14.73□□□□□ -0.05
CTSA-213ENST00000606782 FBXL18Q96ME1 805 aa14.73□□□□□ -0.05
CTSA-213ENST00000606782 ZNF396Q96N95 335 aaPredicted RBP14.73□□□□□ -0.05
CTSA-213ENST00000606782 USP28Q96RU2 1077 aa14.73□□□□□ -0.05
CTSA-213ENST00000606782 COLEC11Q9BWP8 271 aa14.73□□□□□ -0.05
CTSA-213ENST00000606782 RHOBTB2Q9BYZ6 727 aa14.73□□□□□ -0.05
CTSA-213ENST00000606782 RAB34Q9BZG1 259 aa14.73□□□□□ -0.05
CTSA-213ENST00000606782 PDZD7Q9H5P4 517 aa14.73□□□□□ -0.05
CTSA-213ENST00000606782 CDH22Q9UJ99 828 aa14.73□□□□□ -0.05
CTSA-213ENST00000606782 USTQ9Y2C2 406 aa14.73□□□□□ -0.05
CTSA-213ENST00000606782 PRG3Q9Y2Y8 225 aaPredicted RBP14.73□□□□□ -0.05
CTSA-213ENST00000606782 ATP6V1DQ9Y5K8 247 aa14.73□□□□□ -0.05
CTSA-213ENST00000606782 CLIC4Q9Y696 253 aa14.73□□□□□ -0.05
CTSA-213ENST00000606782 MORC2Q9Y6X9 1032 aaPredicted RBP14.73□□□□□ -0.05
CTSA-213ENST00000606782 CACNA1HO95180 2353 aa14.72□□□□□ -0.05
CTSA-213ENST00000606782 TMEM221A6NGB7 291 aa14.72□□□□□ -0.05
CTSA-213ENST00000606782 TTLL13PA6NNM8 815 aa14.72□□□□□ -0.05
CTSA-213ENST00000606782 M0R296 226 aa14.72□□□□□ -0.05
CTSA-213ENST00000606782 N4BP3O15049 544 aa14.72□□□□□ -0.05
CTSA-213ENST00000606782 AKAP5P24588 427 aa14.72□□□□□ -0.05
CTSA-213ENST00000606782 KLRC2P26717 231 aa14.72□□□□□ -0.05
CTSA-213ENST00000606782 CA8P35219 290 aa14.72□□□□□ -0.05
CTSA-213ENST00000606782 NASPP49321 788 aaPredicted RBP14.72□□□□□ -0.05
CTSA-213ENST00000606782 EFNA5P52803 228 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms