RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 NOSTRINQ8IVI9 506 aa8.44□□□□□ -1.06
CUX1-219ENST00000606749 HACE1Q8IYU2 909 aa8.44□□□□□ -1.06
CUX1-219ENST00000606749 ZDHHC14Q8IZN3 488 aa8.44□□□□□ -1.06
CUX1-219ENST00000606749 PLCD3Q8N3E9 789 aa8.44□□□□□ -1.06
CUX1-219ENST00000606749 MCPH1Q8NEM0 835 aa8.44□□□□□ -1.06
CUX1-219ENST00000606749 ERMNQ8TAM6 284 aa8.44□□□□□ -1.06
CUX1-219ENST00000606749 BSNDQ8WZ55 320 aa8.44□□□□□ -1.06
CUX1-219ENST00000606749 HERC2P3Q9BVR0 1158 aa8.44□□□□□ -1.06
CUX1-219ENST00000606749 COLEC11Q9BWP8 271 aa8.44□□□□□ -1.06
CUX1-219ENST00000606749 GPR62Q9BZJ7 368 aa8.44□□□□□ -1.06
CUX1-219ENST00000606749 FZD8Q9H461 694 aa8.44□□□□□ -1.06
CUX1-219ENST00000606749 SFXN1Q9H9B4 322 aa8.44□□□□□ -1.06
CUX1-219ENST00000606749 SH2B1Q9NRF2 756 aaPredicted RBP8.44□□□□□ -1.06
CUX1-219ENST00000606749 CHST7Q9NS84 486 aa8.44□□□□□ -1.06
CUX1-219ENST00000606749 KLK14Q9P0G3 267 aa8.44□□□□□ -1.06
CUX1-219ENST00000606749 PARP2Q9UGN5 583 aa8.44□□□□□ -1.06
CUX1-219ENST00000606749 LIMD1Q9UGP4 676 aa8.44□□□□□ -1.06
CUX1-219ENST00000606749 USTQ9Y2C2 406 aa8.44□□□□□ -1.06
CUX1-219ENST00000606749 SSX2IPQ9Y2D8 614 aa8.44□□□□□ -1.06
CUX1-219ENST00000606749 MYO10Q9HD67 2058 aa8.44□□□□□ -1.06
CUX1-219ENST00000606749 ARID2Q68CP9 1835 aa8.43□□□□□ -1.06
CUX1-219ENST00000606749 TTLL13PA6NNM8 815 aa8.43□□□□□ -1.06
CUX1-219ENST00000606749 TEX28O15482 410 aa8.43□□□□□ -1.06
CUX1-219ENST00000606749 BRD1O95696 1058 aa8.43□□□□□ -1.06
CUX1-219ENST00000606749 URODP06132 367 aa8.43□□□□□ -1.06
CUX1-219ENST00000606749 MUTP22033 750 aa8.43□□□□□ -1.06
CUX1-219ENST00000606749 U2AF2P26368 475 aaKnown RBP eCLIP8.43□□□□□ -1.062e-7■■■■■ 32.4
CUX1-219ENST00000606749 AVPR2P30518 371 aa8.43□□□□□ -1.06
CUX1-219ENST00000606749 TRAPPC10P48553 1259 aa8.43□□□□□ -1.06
CUX1-219ENST00000606749 GLUD2P49448 558 aa8.43□□□□□ -1.06
CUX1-219ENST00000606749 TOB1P50616 345 aaPredicted RBP8.43□□□□□ -1.06
CUX1-219ENST00000606749 DSG1Q02413 1049 aa8.43□□□□□ -1.06
CUX1-219ENST00000606749 PDIA5Q14554 519 aa8.43□□□□□ -1.06
CUX1-219ENST00000606749 ECM1Q16610 540 aa8.43□□□□□ -1.06
CUX1-219ENST00000606749 TTC38Q5R3I4 469 aa8.43□□□□□ -1.06
CUX1-219ENST00000606749 C15orf39Q6ZRI6 1047 aa8.43□□□□□ -1.06
CUX1-219ENST00000606749 ZBTB8OSQ8IWT0 167 aa8.43□□□□□ -1.06
CUX1-219ENST00000606749 SUGP1Q8IWZ8 645 aaKnown RBP8.43□□□□□ -1.06
CUX1-219ENST00000606749 UBALD2Q8IYN6 164 aa8.43□□□□□ -1.06
CUX1-219ENST00000606749 FAM184AQ8NB25 1140 aa8.43□□□□□ -1.06
CUX1-219ENST00000606749 RABGGTAQ92696 567 aa8.43□□□□□ -1.06
CUX1-219ENST00000606749 PRIMPOLQ96LW4 560 aa8.43□□□□□ -1.06
CUX1-219ENST00000606749 PRRX2Q99811 253 aa8.43□□□□□ -1.06
CUX1-219ENST00000606749 C2orf40Q9H1Z8 148 aa8.43□□□□□ -1.06
CUX1-219ENST00000606749 RXFP1Q9HBX9 757 aa8.43□□□□□ -1.06
CUX1-219ENST00000606749 POLD4Q9HCU8 107 aa8.43□□□□□ -1.06
CUX1-219ENST00000606749 PRMT7Q9NVM4 692 aaPredicted RBP8.43□□□□□ -1.06
CUX1-219ENST00000606749 SORCS3Q9UPU3 1222 aa8.43□□□□□ -1.06
CUX1-219ENST00000606749 CCDC195A0A1B0GUA6 201 aa8.42□□□□□ -1.06
CUX1-219ENST00000606749 ARHGEF35A5YM69 484 aa8.42□□□□□ -1.06
CUX1-219ENST00000606749 SPDYE4A6NLX3 237 aa8.42□□□□□ -1.06
CUX1-219ENST00000606749 N4BP3O15049 544 aa8.42□□□□□ -1.06
CUX1-219ENST00000606749 PDGFBP01127 241 aaPredicted RBP8.42□□□□□ -1.06
CUX1-219ENST00000606749 ASGR2P07307 311 aa8.42□□□□□ -1.06
CUX1-219ENST00000606749 ADH1AP07327 375 aa8.42□□□□□ -1.06
CUX1-219ENST00000606749 CCT6AP40227 531 aaKnown RBP8.42□□□□□ -1.06
CUX1-219ENST00000606749 NAMPTP43490 491 aa8.42□□□□□ -1.06
CUX1-219ENST00000606749 MRE11P49959 708 aa8.42□□□□□ -1.06
CUX1-219ENST00000606749 FXR2P51116 673 aaKnown RBP eCLIP8.42□□□□□ -1.06
CUX1-219ENST00000606749 VCPP55072 806 aaKnown RBP8.42□□□□□ -1.06
CUX1-219ENST00000606749 GRIK3Q13003 919 aa8.42□□□□□ -1.06
CUX1-219ENST00000606749 PTGDRQ13258 359 aa8.42□□□□□ -1.06
CUX1-219ENST00000606749 PRPF4BQ13523 1007 aaKnown RBP8.42□□□□□ -1.06
CUX1-219ENST00000606749 MTMR3Q13615 1198 aa8.42□□□□□ -1.06
CUX1-219ENST00000606749 GNL2Q13823 731 aaKnown RBP8.42□□□□□ -1.06
CUX1-219ENST00000606749 NBR1Q14596 966 aa8.42□□□□□ -1.06
CUX1-219ENST00000606749 MAPK6Q16659 721 aa8.42□□□□□ -1.06
CUX1-219ENST00000606749 USP41Q3LFD5 358 aa8.42□□□□□ -1.06
CUX1-219ENST00000606749 C8orf34Q49A92 452 aa8.42□□□□□ -1.06
CUX1-219ENST00000606749 FUT10Q6P4F1 479 aa8.42□□□□□ -1.06
CUX1-219ENST00000606749 GPR65Q8IYL9 337 aa8.42□□□□□ -1.06
CUX1-219ENST00000606749 TDRD5Q8NAT2 981 aaKnown RBP8.42□□□□□ -1.06
CUX1-219ENST00000606749 PRSS33Q8NF86 280 aa8.42□□□□□ -1.06
CUX1-219ENST00000606749 CMASQ8NFW8 434 aaPredicted RBP8.42□□□□□ -1.06
CUX1-219ENST00000606749 DEPTORQ8TB45 409 aa8.42□□□□□ -1.06
CUX1-219ENST00000606749 B3GALT6Q96L58 329 aa8.42□□□□□ -1.06
CUX1-219ENST00000606749 CCDC113Q9H0I3 377 aa8.42□□□□□ -1.06
CUX1-219ENST00000606749 SMOC2Q9H3U7 446 aa8.42□□□□□ -1.06
CUX1-219ENST00000606749 PDZD7Q9H5P4 517 aa8.42□□□□□ -1.06
CUX1-219ENST00000606749 MAN1C1Q9NR34 630 aa8.42□□□□□ -1.06
CUX1-219ENST00000606749 CACNG4Q9UBN1 327 aa8.42□□□□□ -1.06
CUX1-219ENST00000606749 ADAM28Q9UKQ2 775 aa8.42□□□□□ -1.06
CUX1-219ENST00000606749 USP20Q9Y2K6 914 aa8.42□□□□□ -1.06
CUX1-219ENST00000606749 ZMYM2Q9UBW7 1377 aa8.42□□□□□ -1.06
CUX1-219ENST00000606749 MUC6Q6W4X9 2439 aa8.41□□□□□ -1.06
CUX1-219ENST00000606749 ZNF318Q5VUA4 2279 aa8.41□□□□□ -1.06
CUX1-219ENST00000606749 ACKR2O00590 384 aa8.41□□□□□ -1.06
CUX1-219ENST00000606749 PTGESO14684 152 aa8.41□□□□□ -1.06
CUX1-219ENST00000606749 TADA2AO75478 443 aa8.41□□□□□ -1.06
CUX1-219ENST00000606749 PAPLNO95428 1278 aa8.41□□□□□ -1.06
CUX1-219ENST00000606749 GLUD1P00367 558 aa8.41□□□□□ -1.06
CUX1-219ENST00000606749 C1RP00736 705 aa8.41□□□□□ -1.06
CUX1-219ENST00000606749 PRKCBP05771 671 aa8.41□□□□□ -1.06
CUX1-219ENST00000606749 THP07101 528 aa8.41□□□□□ -1.06
CUX1-219ENST00000606749 SPATA31D3P0C874 917 aa8.41□□□□□ -1.06
CUX1-219ENST00000606749 MYBP10242 640 aa8.41□□□□□ -1.06
CUX1-219ENST00000606749 LIG1P18858 919 aa8.41□□□□□ -1.06
CUX1-219ENST00000606749 EFNA5P52803 228 aa8.41□□□□□ -1.06
CUX1-219ENST00000606749 PTPN5P54829 565 aa8.41□□□□□ -1.06
CUX1-219ENST00000606749 TCF15Q12870 199 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms