RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 RRAGBQ5VZM2 374 aa12.69□□□□□ -0.38
CCDC12-209ENST00000604164 PLPP4Q5VZY2 271 aa12.69□□□□□ -0.38
CCDC12-209ENST00000604164 PTCRAQ6ISU1 281 aaPredicted RBP12.69□□□□□ -0.38
CCDC12-209ENST00000604164 CCDC73Q6ZRK6 1079 aa12.69□□□□□ -0.38
CCDC12-209ENST00000604164 ZNF280BQ86YH2 543 aa12.69□□□□□ -0.38
CCDC12-209ENST00000604164 VPS52Q8N1B4 723 aa12.69□□□□□ -0.38
CCDC12-209ENST00000604164 MRPL43Q8N983 215 aaKnown RBP12.69□□□□□ -0.38
CCDC12-209ENST00000604164 USP28Q96RU2 1077 aa12.69□□□□□ -0.38
CCDC12-209ENST00000604164 CCDC94Q9BW85 323 aaPredicted RBP12.69□□□□□ -0.38
CCDC12-209ENST00000604164 PARVGQ9HBI0 331 aa12.69□□□□□ -0.38
CCDC12-209ENST00000604164 TOPORSQ9NS56 1045 aaPredicted RBP12.69□□□□□ -0.38
CCDC12-209ENST00000604164 CFAP45Q9UL16 551 aa12.69□□□□□ -0.38
CCDC12-209ENST00000604164 PRUNE2Q8WUY3 3088 aa12.69□□□□□ -0.38
CCDC12-209ENST00000604164 SFI1A8K8P3 1242 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 NT5C1B-RDH14C9J2C7 533 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 NRP1O14786 923 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 SPTLC2O15270 562 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 PPP6R2O75170 966 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 DDHD2O94830 711 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 CXCL14O95715 111 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 THP07101 528 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 CTSAP10619 480 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 AKAP5P24588 427 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 CA8P35219 290 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 OR1G1P47890 313 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 SCNN1GP51170 649 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 GRIN1Q05586 938 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 DSC1Q08554 894 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 RAD51AP2Q09MP3 1159 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 DHX8Q14562 1220 aaKnown RBP12.68□□□□□ -0.38
CCDC12-209ENST00000604164 MCM6Q14566 821 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 ZNF568Q3ZCX4 644 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 NT5DC1Q5TFE4 455 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 FAM173BQ6P4H8 233 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 ADGRD2Q7Z7M1 963 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 RBM23Q86U06 439 aaKnown RBP12.68□□□□□ -0.38
CCDC12-209ENST00000604164 PPFIBP1Q86W92 1011 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 CDR2LQ86X02 465 aaPredicted RBP12.68□□□□□ -0.38
CCDC12-209ENST00000604164 COLGALT2Q8IYK4 626 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 MYCT1Q8N699 235 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 LINC00301Q8NCQ3 95 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 TMEM161BQ8NDZ6 487 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 KCNG4Q8TDN1 519 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 KCNN1Q92952 543 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 EPSTI1Q96J88 318 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 ZFP42Q96MM3 310 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 ACO2Q99798 780 aaKnown RBP12.68□□□□□ -0.38
CCDC12-209ENST00000604164 REEP2Q9BRK0 252 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 TCHPQ9BT92 498 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 LRRC27Q9C0I9 530 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 RNF39Q9H2S5 420 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 POLD4Q9HCU8 107 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 BLOC1S4Q9NUP1 217 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 DNAJB4Q9UDY4 337 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 CD207Q9UJ71 328 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.68□□□□□ -0.38
CCDC12-209ENST00000604164 IRAK3Q9Y616 596 aa12.68□□□□□ -0.38
CCDC12-209ENST00000604164 GRXCR2A6NFK2 248 aa12.67□□□□□ -0.38
CCDC12-209ENST00000604164 H3BQ06 376 aaPredicted RBP12.67□□□□□ -0.38
CCDC12-209ENST00000604164 TNFRSF10AO00220 468 aa12.67□□□□□ -0.38
CCDC12-209ENST00000604164 TOM1L1O75674 476 aa12.67□□□□□ -0.38
CCDC12-209ENST00000604164 RECQL4O94761 1208 aa12.67□□□□□ -0.38
CCDC12-209ENST00000604164 F13A1P00488 732 aa12.67□□□□□ -0.38
CCDC12-209ENST00000604164 MAPTP10636 758 aaKnown RBP12.67□□□□□ -0.38
CCDC12-209ENST00000604164 MCF2P10911 925 aa12.67□□□□□ -0.38
CCDC12-209ENST00000604164 HOXB8P17481 243 aaPredicted RBP12.67□□□□□ -0.38
CCDC12-209ENST00000604164 GRM5P41594 1212 aa12.67□□□□□ -0.38
CCDC12-209ENST00000604164 STAT6P42226 847 aa12.67□□□□□ -0.38
CCDC12-209ENST00000604164 ZNF131P52739 623 aa12.67□□□□□ -0.38
CCDC12-209ENST00000604164 COASYQ13057 564 aa12.67□□□□□ -0.38
CCDC12-209ENST00000604164 TUSC3Q13454 348 aa12.67□□□□□ -0.38
CCDC12-209ENST00000604164 SMAD4Q13485 552 aaKnown RBP12.67□□□□□ -0.38
CCDC12-209ENST00000604164 BECN1Q14457 450 aa12.67□□□□□ -0.38
CCDC12-209ENST00000604164 KYAT1Q16773 422 aa12.67□□□□□ -0.38
CCDC12-209ENST00000604164 ARSHQ5FYA8 562 aa12.67□□□□□ -0.38
CCDC12-209ENST00000604164 ELMSAN1Q6PJG2 1045 aa12.67□□□□□ -0.38
CCDC12-209ENST00000604164 MPZL3Q6UWV2 235 aa12.67□□□□□ -0.38
CCDC12-209ENST00000604164 ZPBP2Q6X784 338 aa12.67□□□□□ -0.38
CCDC12-209ENST00000604164 TMEM184AQ6ZMB5 413 aa12.67□□□□□ -0.38
CCDC12-209ENST00000604164 SV2BQ7L1I2 683 aa12.67□□□□□ -0.38
CCDC12-209ENST00000604164 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.67□□□□□ -0.38
CCDC12-209ENST00000604164 CASP10Q92851 521 aa12.67□□□□□ -0.38
CCDC12-209ENST00000604164 BICD1Q96G01 975 aa12.67□□□□□ -0.38
CCDC12-209ENST00000604164 EMILIN2Q9BXX0 1053 aa12.67□□□□□ -0.38
CCDC12-209ENST00000604164 ZBP1Q9H171 429 aa12.67□□□□□ -0.38
CCDC12-209ENST00000604164 MRPL17Q9NRX2 175 aaKnown RBP12.67□□□□□ -0.38
CCDC12-209ENST00000604164 SNTG2Q9NY99 539 aa12.67□□□□□ -0.38
CCDC12-209ENST00000604164 PRKAG3Q9UGI9 489 aa12.67□□□□□ -0.38
CCDC12-209ENST00000604164 PLXNA4Q9HCM2 1894 aa12.67□□□□□ -0.38
CCDC12-209ENST00000604164 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.66□□□□□ -0.38
CCDC12-209ENST00000604164 C2orf71A6NGG8 1288 aa12.66□□□□□ -0.38
CCDC12-209ENST00000604164 TTLL13PA6NNM8 815 aa12.66□□□□□ -0.38
CCDC12-209ENST00000604164 PER2O15055 1255 aa12.66□□□□□ -0.38
CCDC12-209ENST00000604164 TRAK2O60296 914 aa12.66□□□□□ -0.38
CCDC12-209ENST00000604164 CUTAO60888 179 aa12.66□□□□□ -0.38
CCDC12-209ENST00000604164 BRD1O95696 1058 aa12.66□□□□□ -0.38
CCDC12-209ENST00000604164 URODP06132 367 aa12.66□□□□□ -0.38
CCDC12-209ENST00000604164 GTF2F1P35269 517 aaKnown RBP eCLIP12.66□□□□□ -0.383e-7■■■□□ 14.9
CCDC12-209ENST00000604164 LTBRP36941 435 aa12.66□□□□□ -0.38
CCDC12-209ENST00000604164 AFF1P51825 1210 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms