RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 CDT1Q9H211 546 aa10.38□□□□□ -0.75
SQSTM1P1-201ENST00000603451 BLZF1Q9H2G9 400 aa10.38□□□□□ -0.75
SQSTM1P1-201ENST00000603451 RSAD1Q9HA92 442 aa10.38□□□□□ -0.75
SQSTM1P1-201ENST00000603451 KANSL3Q9P2N6 904 aa10.38□□□□□ -0.75
SQSTM1P1-201ENST00000603451 IPPQ9Y573 584 aa10.38□□□□□ -0.75
SQSTM1P1-201ENST00000603451 A0A0B4J269 797 aa10.37□□□□□ -0.75
SQSTM1P1-201ENST00000603451 LDHAP00338 332 aaKnown RBP10.37□□□□□ -0.75
SQSTM1P1-201ENST00000603451 ITGA4P13612 1032 aa10.37□□□□□ -0.75
SQSTM1P1-201ENST00000603451 DNAJB2P25686 324 aa10.37□□□□□ -0.75
SQSTM1P1-201ENST00000603451 HABP4Q5JVS0 413 aaKnown RBP10.37□□□□□ -0.75
SQSTM1P1-201ENST00000603451 FOXR2Q6PJQ5 311 aa10.37□□□□□ -0.75
SQSTM1P1-201ENST00000603451 HS2ST1Q7LGA3 356 aa10.37□□□□□ -0.75
SQSTM1P1-201ENST00000603451 C12orf56Q8IXR9 622 aa10.37□□□□□ -0.75
SQSTM1P1-201ENST00000603451 GRAMD1CQ8IYS0 662 aa10.37□□□□□ -0.75
SQSTM1P1-201ENST00000603451 GUF1Q8N442 669 aaKnown RBP10.37□□□□□ -0.75
SQSTM1P1-201ENST00000603451 SMG8Q8ND04 991 aaKnown RBP10.37□□□□□ -0.75
SQSTM1P1-201ENST00000603451 URGCPQ8TCY9 931 aa10.37□□□□□ -0.75
SQSTM1P1-201ENST00000603451 CLP1Q92989 425 aaKnown RBP10.37□□□□□ -0.75
SQSTM1P1-201ENST00000603451 CPB2Q96IY4 423 aa10.37□□□□□ -0.75
SQSTM1P1-201ENST00000603451 TCHPQ9BT92 498 aa10.37□□□□□ -0.75
SQSTM1P1-201ENST00000603451 TARS2Q9BW92 718 aaKnown RBP10.37□□□□□ -0.75
SQSTM1P1-201ENST00000603451 PBX4Q9BYU1 374 aa10.37□□□□□ -0.75
SQSTM1P1-201ENST00000603451 KIAA1586Q9HCI6 787 aa10.37□□□□□ -0.75
SQSTM1P1-201ENST00000603451 POLD4Q9HCU8 107 aa10.37□□□□□ -0.75
SQSTM1P1-201ENST00000603451 STK39Q9UEW8 545 aa10.37□□□□□ -0.75
SQSTM1P1-201ENST00000603451 PDXKO00764 312 aa10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 OGTO15294 1046 aa10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 NPTXRO95502 500 aa10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 EDN1P05305 212 aa10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 CLTAP09496 248 aa10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 PRR29P0C7W0 189 aa10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 MYBP10242 640 aa10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 MCM4P33991 863 aa10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 CASP5P51878 434 aa10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 YARSP54577 528 aaKnown RBP10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 GRIK3Q13003 919 aa10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 PNOCQ13519 176 aa10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 STIM1Q13586 685 aa10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 MYBPC2Q14324 1141 aa10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 NFIL3Q16649 462 aa10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 KNOP1Q1ED39 458 aaKnown RBP10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 ZC2HC1CQ53FD0 456 aaPredicted RBP10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 ZNF658Q5TYW1 1059 aaPredicted RBP10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 CD302Q8IX05 232 aa10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 SYCP3Q8IZU3 236 aa10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 FIBCD1Q8N539 461 aa10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 KIAA0895Q8NCT3 520 aa10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 SCFD1Q8WVM8 642 aa10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 TIFAQ96CG3 184 aa10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 PLVAPQ9BX97 442 aa10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 EIF2AQ9BY44 585 aaKnown RBP10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 NUP62CLQ9H1M0 184 aa10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 CLSTN2Q9H4D0 955 aa10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 NXF3Q9H4D5 531 aaKnown RBP10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 SLC28A3Q9HAS3 691 aa10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 PLEKHA5Q9HAU0 1116 aa10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 AAASQ9NRG9 546 aa10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 TYW1Q9NV66 732 aaKnown RBP10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 ANKFY1Q9P2R3 1169 aa10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 PCDHA5Q9Y5H7 936 aa10.36□□□□□ -0.75
SQSTM1P1-201ENST00000603451 TTLL13PA6NNM8 815 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 C5orf67F2Z3F1 127 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 FAM189A1O60320 539 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 UPP2O95045 317 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 RB1P06400 928 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 LAG3P18627 525 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 CASP1P29466 404 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 PPM1AP35813 382 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 STK4Q13043 487 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 BTG3Q14201 252 aaPredicted RBP10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 XKR4Q5GH76 650 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 NOMO2Q5JPE7 1267 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 CLLU1OSQ5K130 101 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 EEF1DP3Q658K8 133 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 PPP2R2DQ66LE6 453 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 SLC39A4Q6P5W5 647 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 AGMOQ6ZNB7 445 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 NT5DC4Q86YG4 428 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 SLC9A9Q8IVB4 645 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 POMGNT1Q8WZA1 660 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 P2RX5Q93086 422 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 SYAP1Q96A49 352 aaPredicted RBP10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 RPS6KC1Q96S38 1066 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 MSTO1Q9BUK6 570 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 SLC39A2Q9NP94 309 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 RNF19AQ9NV58 838 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 SLC38A7Q9NVC3 462 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 TBC1D7Q9P0N9 293 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 CNTN3Q9P232 1028 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 KIAA1468Q9P260 1216 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 PCDH10Q9P2E7 1040 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 TRAF3IP3Q9Y228 551 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 ANK1P16157 1881 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 LAMA3Q16787 3333 aa10.35□□□□□ -0.75
SQSTM1P1-201ENST00000603451 COL4A4P53420 1690 aaPredicted RBP10.34□□□□□ -0.75
SQSTM1P1-201ENST00000603451 LINC01553A4QN01 128 aa10.34□□□□□ -0.75
SQSTM1P1-201ENST00000603451 ARL5CA6NH57 179 aa10.34□□□□□ -0.75
SQSTM1P1-201ENST00000603451 XPOTO43592 962 aaKnown RBP10.34□□□□□ -0.75
SQSTM1P1-201ENST00000603451 OFD1O75665 1012 aa10.34□□□□□ -0.75
SQSTM1P1-201ENST00000603451 RECQL4O94761 1208 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms