RNA–Protein interactions for RNA: ENST00000602837.1

UBE2E3-211, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-211ENST00000602837 PIK3AP1Q6ZUJ8 805 aa8.14□□□□□ -1.11
UBE2E3-211ENST00000602837 CYFIP1Q7L576 1253 aa8.14□□□□□ -1.11
UBE2E3-211ENST00000602837 PLA2G4DQ86XP0 818 aa8.14□□□□□ -1.11
UBE2E3-211ENST00000602837 TEX2Q8IWB9 1127 aa8.14□□□□□ -1.11
UBE2E3-211ENST00000602837 HSCBQ8IWL3 235 aa8.14□□□□□ -1.11
UBE2E3-211ENST00000602837 DAGLBQ8NCG7 672 aa8.14□□□□□ -1.11
UBE2E3-211ENST00000602837 AFG1LQ8WV93 481 aa8.14□□□□□ -1.11
UBE2E3-211ENST00000602837 DPF3Q92784 378 aa8.14□□□□□ -1.11
UBE2E3-211ENST00000602837 INPP4AQ96PE3 977 aaPredicted RBP8.14□□□□□ -1.11
UBE2E3-211ENST00000602837 LRRC3Q9BY71 257 aa8.14□□□□□ -1.11
UBE2E3-211ENST00000602837 JADE2Q9NQC1 790 aa8.14□□□□□ -1.11
UBE2E3-211ENST00000602837 Q9Y3F1 56 aa8.14□□□□□ -1.11
UBE2E3-211ENST00000602837 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.14□□□□□ -1.11
UBE2E3-211ENST00000602837 LRRC37A2A6NM11 1700 aa8.14□□□□□ -1.11
UBE2E3-211ENST00000602837 FAM86B1E9PN63 330 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 H3BQV1 296 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 K7ELQ4 463 aaPredicted RBP8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 DDX39AO00148 427 aaKnown RBP8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 CTAGE5O15320 804 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 EIF4EBP3O60516 100 aaPredicted RBP8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 ATP9AO75110 1047 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 BPNT1O95861 308 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 MMP1P03956 469 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 ASGR1P07306 291 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 CYP3A4P08684 503 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 FAM86B2P0C5J1 330 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 TGFB3P10600 412 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 ATP2B1P20020 1258 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 UBA1P22314 1058 aaKnown RBP8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 ICAM3P32942 547 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 GTF2F1P35269 517 aaKnown RBP eCLIP8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 RGS19P49795 217 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 CPT1AP50416 773 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 ACLYP53396 1101 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 MTMR1Q13613 665 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 MPP2Q14168 576 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 NEDD9Q14511 834 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 GRIK4Q16099 956 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 LETM2Q2VYF4 491 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 CEP55Q53EZ4 464 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 PRR16Q569H4 304 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 BRDTQ58F21 947 aaPredicted RBP8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 EARS2Q5JPH6 523 aaKnown RBP8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 MCTP1Q6DN14 999 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 LRFN4Q6PJG9 635 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 SHISA2Q6UWI4 295 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 CXCL17Q6UXB2 119 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 REC114Q7Z4M0 266 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 SLITRK4Q8IW52 837 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 DIS3L2Q8IYB7 885 aaKnown RBP8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 FAM177A1Q8N128 213 aaPredicted RBP8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 PCSK9Q8NBP7 692 aaKnown RBP8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 PPP1R13LQ8WUF5 828 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 PLPPR2Q96GM1 343 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 CDHR1Q96JP9 859 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 SPATA33Q96N06 139 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 KRT82Q9NSB4 513 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 PPT2Q9UMR5 302 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 KIF3AQ9Y496 699 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 TELO2Q9Y4R8 837 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 KIAA1217Q5T5P2 1943 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 FRMPD3Q5JV73 1810 aa8.13□□□□□ -1.11
UBE2E3-211ENST00000602837 HTTP42858 3142 aa8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 MYH7BA7E2Y1 1941 aa8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 A0A1W2PQ45 241 aaPredicted RBP8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 A0A1W2PQY0 241 aa8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 DCDC2CA8MYV0 355 aa8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 MEIS1O00470 390 aa8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 NOP56O00567 594 aaKnown RBP8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 EDIL3O43854 480 aa8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 TDP2O95551 362 aa8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 COL6A1P12109 1028 aa8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 KCNA2P16389 499 aa8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 CST5P28325 142 aaPredicted RBP8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 MCM4P33991 863 aa8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 SOX9P48436 509 aa8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 USP11P51784 963 aa8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 PSMC6P62333 389 aa8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 RPL6Q02878 288 aaKnown RBP8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 CUL4AQ13619 759 aa8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 LRRC26Q2I0M4 334 aa8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 WIPI1Q5MNZ9 446 aaPredicted RBP8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 UTP14CQ5TAP6 766 aaKnown RBP8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 LARP1BQ659C4 914 aaKnown RBP8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 SCARA3Q6AZY7 606 aa8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 CCSAPQ6IQ19 270 aaPredicted RBP8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 SLC39A5Q6ZMH5 540 aa8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 CCDC81Q6ZN84 652 aa8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 ACAD11Q709F0 780 aa8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 UBE2Q1Q7Z7E8 422 aa8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 FBXO18Q8NFZ0 1043 aa8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 SNX21Q969T3 373 aa8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 SEC16BQ96JE7 1060 aa8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 GLT1D1Q96MS3 346 aa8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 SDF4Q9BRK5 362 aa8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 HTATIP2Q9BUP3 242 aa8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 AGO4Q9HCK5 861 aaKnown RBP8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 STARD7Q9NQZ5 370 aa8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 KCNH7Q9NS40 1196 aa8.12□□□□□ -1.11
UBE2E3-211ENST00000602837 ATP11BQ9Y2G3 1177 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms