RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 OFD1O75665 1012 aa15.2■□□□□ 0.02
RNF40-212ENST00000602784 RPN1P04843 607 aaKnown RBP15.2■□□□□ 0.02
RNF40-212ENST00000602784 MYBP10242 640 aa15.2■□□□□ 0.02
RNF40-212ENST00000602784 IBSPP21815 317 aaPredicted RBP15.2■□□□□ 0.02
RNF40-212ENST00000602784 CASP5P51878 434 aa15.2■□□□□ 0.02
RNF40-212ENST00000602784 TAP1Q03518 808 aa15.2■□□□□ 0.02
RNF40-212ENST00000602784 KCNB1Q14721 858 aa15.2■□□□□ 0.02
RNF40-212ENST00000602784 ZNF568Q3ZCX4 644 aa15.2■□□□□ 0.02
RNF40-212ENST00000602784 KMT5BQ4FZB7 885 aa15.2■□□□□ 0.02
RNF40-212ENST00000602784 PPP2R2DQ66LE6 453 aa15.2■□□□□ 0.02
RNF40-212ENST00000602784 SLFN12LQ6IEE8 588 aa15.2■□□□□ 0.02
RNF40-212ENST00000602784 FIBCD1Q8N539 461 aa15.2■□□□□ 0.02
RNF40-212ENST00000602784 ZNF507Q8TCN5 953 aa15.2■□□□□ 0.02
RNF40-212ENST00000602784 CLP1Q92989 425 aaKnown RBP15.2■□□□□ 0.02
RNF40-212ENST00000602784 SAMD11Q96NU1 681 aa15.2■□□□□ 0.02
RNF40-212ENST00000602784 FGFBP2Q9BYJ0 223 aa15.2■□□□□ 0.02
RNF40-212ENST00000602784 CDT1Q9H211 546 aa15.2■□□□□ 0.02
RNF40-212ENST00000602784 RNF39Q9H2S5 420 aa15.2■□□□□ 0.02
RNF40-212ENST00000602784 NXF3Q9H4D5 531 aaKnown RBP15.2■□□□□ 0.02
RNF40-212ENST00000602784 TMEM206Q9H813 350 aa15.2■□□□□ 0.02
RNF40-212ENST00000602784 RSAD1Q9HA92 442 aa15.2■□□□□ 0.02
RNF40-212ENST00000602784 EXOC1Q9NV70 894 aa15.2■□□□□ 0.02
RNF40-212ENST00000602784 KANSL3Q9P2N6 904 aa15.2■□□□□ 0.02
RNF40-212ENST00000602784 STYXL1Q9Y6J8 313 aa15.2■□□□□ 0.02
RNF40-212ENST00000602784 UBE4BO95155 1302 aa15.19■□□□□ 0.02
RNF40-212ENST00000602784 A0A0B4J269 797 aa15.19■□□□□ 0.02
RNF40-212ENST00000602784 TBKBP1A7MCY6 615 aa15.19■□□□□ 0.02
RNF40-212ENST00000602784 MEIS3P2A8K0S8 358 aa15.19■□□□□ 0.02
RNF40-212ENST00000602784 RHOBTB3O94955 611 aa15.19■□□□□ 0.02
RNF40-212ENST00000602784 PRR29P0C7W0 189 aa15.19■□□□□ 0.02
RNF40-212ENST00000602784 GRM5P41594 1212 aa15.19■□□□□ 0.02
RNF40-212ENST00000602784 ERVK-21P61565 698 aa15.19■□□□□ 0.02
RNF40-212ENST00000602784 NOLC1Q14978 699 aaKnown RBP eCLIP15.19■□□□□ 0.02
RNF40-212ENST00000602784 KYAT1Q16773 422 aa15.19■□□□□ 0.02
RNF40-212ENST00000602784 BMT2Q1RMZ1 405 aa15.19■□□□□ 0.02
RNF40-212ENST00000602784 NOMO2Q5JPE7 1267 aa15.19■□□□□ 0.02
RNF40-212ENST00000602784 SPATA20Q8TB22 786 aa15.19■□□□□ 0.02
RNF40-212ENST00000602784 HELQQ8TDG4 1101 aa15.19■□□□□ 0.02
RNF40-212ENST00000602784 LPPQ93052 612 aa15.19■□□□□ 0.02
RNF40-212ENST00000602784 HPS3Q969F9 1004 aa15.19■□□□□ 0.02
RNF40-212ENST00000602784 ZBTB45Q96K62 511 aaPredicted RBP15.19■□□□□ 0.02
RNF40-212ENST00000602784 GSDMAQ96QA5 445 aa15.19■□□□□ 0.02
RNF40-212ENST00000602784 TGS1Q96RS0 853 aaKnown RBP15.19■□□□□ 0.02
RNF40-212ENST00000602784 MRPL9Q9BYD2 267 aaKnown RBP15.19■□□□□ 0.02
RNF40-212ENST00000602784 GTPBP4Q9BZE4 634 aaKnown RBP15.19■□□□□ 0.02
RNF40-212ENST00000602784 ZNF576Q9H609 170 aa15.19■□□□□ 0.02
RNF40-212ENST00000602784 LMBRD1Q9NUN5 540 aa15.19■□□□□ 0.02
RNF40-212ENST00000602784 RWDD3Q9Y3V2 267 aa15.19■□□□□ 0.02
RNF40-212ENST00000602784 HES2Q9Y543 173 aa15.19■□□□□ 0.02
RNF40-212ENST00000602784 FNDC1Q4ZHG4 1894 aaPredicted RBP15.18■□□□□ 0.02
RNF40-212ENST00000602784 CARNS1A5YM72 827 aa15.18■□□□□ 0.02
RNF40-212ENST00000602784 SMC2O95347 1197 aa15.18■□□□□ 0.02
RNF40-212ENST00000602784 LINC00271P0C7V0 271 aa15.18■□□□□ 0.02
RNF40-212ENST00000602784 GATMP50440 423 aa15.18■□□□□ 0.02
RNF40-212ENST00000602784 SNRPFP62306 86 aaKnown RBP15.18■□□□□ 0.02
RNF40-212ENST00000602784 KCNA1Q09470 495 aa15.18■□□□□ 0.02
RNF40-212ENST00000602784 ZNF697Q5TEC3 545 aa15.18■□□□□ 0.02
RNF40-212ENST00000602784 SLC39A4Q6P5W5 647 aa15.18■□□□□ 0.02
RNF40-212ENST00000602784 LRRC43Q8N309 656 aa15.18■□□□□ 0.02
RNF40-212ENST00000602784 URGCPQ8TCY9 931 aa15.18■□□□□ 0.02
RNF40-212ENST00000602784 SCFD1Q8WVM8 642 aa15.18■□□□□ 0.02
RNF40-212ENST00000602784 SEMA6BQ9H3T3 888 aa15.18■□□□□ 0.02
RNF40-212ENST00000602784 SLC39A2Q9NP94 309 aa15.18■□□□□ 0.02
RNF40-212ENST00000602784 RMND1Q9NWS8 449 aa15.18■□□□□ 0.02
RNF40-212ENST00000602784 ARL5CA6NH57 179 aa15.17■□□□□ 0.02
RNF40-212ENST00000602784 ANKRD63C9JTQ0 380 aa15.17■□□□□ 0.02
RNF40-212ENST00000602784 OGTO15294 1046 aa15.17■□□□□ 0.02
RNF40-212ENST00000602784 PRPF6O94906 941 aaKnown RBP15.17■□□□□ 0.02
RNF40-212ENST00000602784 ARHGEF15O94989 841 aa15.17■□□□□ 0.02
RNF40-212ENST00000602784 HOXD13P35453 343 aa15.17■□□□□ 0.02
RNF40-212ENST00000602784 BMPR1AP36894 532 aa15.17■□□□□ 0.02
RNF40-212ENST00000602784 POU5F1Q01860 360 aaKnown RBP15.17■□□□□ 0.02
RNF40-212ENST00000602784 STK4Q13043 487 aa15.17■□□□□ 0.02
RNF40-212ENST00000602784 PNOCQ13519 176 aa15.17■□□□□ 0.02
RNF40-212ENST00000602784 PAN2Q504Q3 1202 aaKnown RBP15.17■□□□□ 0.02
RNF40-212ENST00000602784 LRRC55Q6ZSA7 311 aa15.17■□□□□ 0.02
RNF40-212ENST00000602784 ZBTB33Q86T24 672 aa15.17■□□□□ 0.02
RNF40-212ENST00000602784 SYCP3Q8IZU3 236 aa15.17■□□□□ 0.02
RNF40-212ENST00000602784 GLIS3Q8NEA6 775 aa15.17■□□□□ 0.02
RNF40-212ENST00000602784 GAD1Q99259 594 aa15.17■□□□□ 0.02
RNF40-212ENST00000602784 CCDC94Q9BW85 323 aaPredicted RBP15.17■□□□□ 0.02
RNF40-212ENST00000602784 PLVAPQ9BX97 442 aa15.17■□□□□ 0.02
RNF40-212ENST00000602784 HAPLN2Q9GZV7 340 aa15.17■□□□□ 0.02
RNF40-212ENST00000602784 TTYH1Q9H313 450 aaPredicted RBP15.17■□□□□ 0.02
RNF40-212ENST00000602784 TOPORSQ9NS56 1045 aaPredicted RBP15.17■□□□□ 0.02
RNF40-212ENST00000602784 TYW1Q9NV66 732 aaKnown RBP15.17■□□□□ 0.02
RNF40-212ENST00000602784 SNTG2Q9NY99 539 aa15.17■□□□□ 0.02
RNF40-212ENST00000602784 ANKFY1Q9P2R3 1169 aa15.17■□□□□ 0.02
RNF40-212ENST00000602784 PARP2Q9UGN5 583 aa15.17■□□□□ 0.02
RNF40-212ENST00000602784 MRPL42Q9Y6G3 142 aaKnown RBP15.17■□□□□ 0.02
RNF40-212ENST00000602784 C5orf67F2Z3F1 127 aa15.16■□□□□ 0.02
RNF40-212ENST00000602784 RECQL4O94761 1208 aa15.16■□□□□ 0.02
RNF40-212ENST00000602784 KIF20AO95235 890 aa15.16■□□□□ 0.02
RNF40-212ENST00000602784 RB1P06400 928 aa15.16■□□□□ 0.02
RNF40-212ENST00000602784 CLTAP09496 248 aa15.16■□□□□ 0.02
RNF40-212ENST00000602784 GARTP22102 1010 aa15.16■□□□□ 0.02
RNF40-212ENST00000602784 AKAP5P24588 427 aa15.16■□□□□ 0.02
RNF40-212ENST00000602784 ADSSP30520 456 aa15.16■□□□□ 0.02
RNF40-212ENST00000602784 MATR3P43243 847 aaKnown RBP eCLIP15.16■□□□□ 0.02
RNF40-212ENST00000602784 YARSP54577 528 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms