RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 MYBPC2Q14324 1141 aa18.89■□□□□ 0.61
PPFIA3-207ENST00000602716 TCERG1LQ5VWI1 586 aa18.89■□□□□ 0.61
PPFIA3-207ENST00000602716 FBXO38Q6PIJ6 1188 aa18.89■□□□□ 0.61
PPFIA3-207ENST00000602716 RNF180Q86T96 592 aa18.89■□□□□ 0.61
PPFIA3-207ENST00000602716 TMEM40Q8WWA1 233 aa18.89■□□□□ 0.61
PPFIA3-207ENST00000602716 OSMRQ99650 979 aa18.89■□□□□ 0.61
PPFIA3-207ENST00000602716 ACO2Q99798 780 aaKnown RBP18.89■□□□□ 0.61
PPFIA3-207ENST00000602716 NFKBIZQ9BYH8 718 aa18.89■□□□□ 0.61
PPFIA3-207ENST00000602716 KCNG1Q9UIX4 513 aa18.89■□□□□ 0.61
PPFIA3-207ENST00000602716 FRMD4BQ9Y2L6 1034 aa18.89■□□□□ 0.61
PPFIA3-207ENST00000602716 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.89■□□□□ 0.617e-7■□□□□ 8.4
PPFIA3-207ENST00000602716 ARHGAP6O43182 974 aa18.88■□□□□ 0.61
PPFIA3-207ENST00000602716 KCNH2Q12809 1159 aa18.88■□□□□ 0.61
PPFIA3-207ENST00000602716 C1orf220Q5T0J3 134 aa18.88■□□□□ 0.61
PPFIA3-207ENST00000602716 IFNLR1Q8IU57 520 aaPredicted RBP18.88■□□□□ 0.61
PPFIA3-207ENST00000602716 FAM213AQ9BRX8 229 aa18.88■□□□□ 0.61
PPFIA3-207ENST00000602716 MRPL4Q9BYD3 311 aaKnown RBP18.88■□□□□ 0.61
PPFIA3-207ENST00000602716 SIK3Q9Y2K2 1263 aa18.88■□□□□ 0.61
PPFIA3-207ENST00000602716 TRIP12Q14669 1992 aaPredicted RBP18.88■□□□□ 0.61
PPFIA3-207ENST00000602716 GYPCP04921 128 aa18.88■□□□□ 0.61
PPFIA3-207ENST00000602716 GARTP22102 1010 aa18.88■□□□□ 0.61
PPFIA3-207ENST00000602716 SNRPFP62306 86 aaKnown RBP18.88■□□□□ 0.61
PPFIA3-207ENST00000602716 SNRNP35Q16560 246 aaKnown RBP18.88■□□□□ 0.61
PPFIA3-207ENST00000602716 SLC9C1Q4G0N8 1177 aa18.88■□□□□ 0.61
PPFIA3-207ENST00000602716 ZBTB33Q86T24 672 aa18.88■□□□□ 0.61
PPFIA3-207ENST00000602716 PCSK9Q8NBP7 692 aaKnown RBP18.88■□□□□ 0.61
PPFIA3-207ENST00000602716 LRRN4CLQ8ND94 238 aa18.88■□□□□ 0.61
PPFIA3-207ENST00000602716 CPB2Q96IY4 423 aa18.88■□□□□ 0.61
PPFIA3-207ENST00000602716 FBXL18Q96ME1 805 aa18.88■□□□□ 0.61
PPFIA3-207ENST00000602716 CRACR2AQ9BSW2 395 aa18.88■□□□□ 0.61
PPFIA3-207ENST00000602716 MMRN2Q9H8L6 949 aa18.88■□□□□ 0.61
PPFIA3-207ENST00000602716 DNAI1Q9UI46 699 aa18.88■□□□□ 0.61
PPFIA3-207ENST00000602716 A0A0B4J269 797 aa18.87■□□□□ 0.61
PPFIA3-207ENST00000602716 ACKR2O00590 384 aa18.87■□□□□ 0.61
PPFIA3-207ENST00000602716 ZSCAN12O43309 604 aa18.87■□□□□ 0.61
PPFIA3-207ENST00000602716 FAM189A1O60320 539 aa18.87■□□□□ 0.61
PPFIA3-207ENST00000602716 ACOT2P49753 483 aa18.87■□□□□ 0.61
PPFIA3-207ENST00000602716 KCNMA1Q12791 1236 aa18.87■□□□□ 0.61
PPFIA3-207ENST00000602716 BFSP1Q12934 665 aa18.87■□□□□ 0.61
PPFIA3-207ENST00000602716 CRELD2Q6UXH1 353 aaPredicted RBP18.87■□□□□ 0.61
PPFIA3-207ENST00000602716 METTL14Q9HCE5 456 aaKnown RBP18.87■□□□□ 0.61
PPFIA3-207ENST00000602716 TOPORSQ9NS56 1045 aaPredicted RBP18.87■□□□□ 0.61
PPFIA3-207ENST00000602716 ITIH6Q6UXX5 1313 aa18.87■□□□□ 0.61
PPFIA3-207ENST00000602716 ABCD1P33897 745 aa18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 FXR1P51114 621 aaKnown RBP eCLIP18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 POU5F1BQ06416 359 aa18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 PRPF4BQ13523 1007 aaKnown RBP18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 CBWD6Q4V339 395 aa18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 CBWD3Q5JTY5 395 aa18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 CBWD5Q5RIA9 395 aa18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 ZPBP2Q6X784 338 aa18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 CEP120Q8N960 986 aa18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 CPLX3Q8WVH0 158 aa18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 ERGIC2Q96RQ1 377 aa18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 MSTO1Q9BUK6 570 aa18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 PAK6Q9NQU5 681 aaPredicted RBP18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 AGO2Q9UKV8 859 aaKnown RBP18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 A0A1W2PQ45 241 aaPredicted RBP18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 A0A1W2PQC6 194 aa18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 A0A1W2PQY0 241 aa18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 FANCGO15287 622 aa18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 TSPAN1O60635 241 aa18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 AFPP02771 609 aaKnown RBP18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 SCP2P22307 547 aa18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 PROZP22891 400 aa18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 TNFSF9P41273 254 aa18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 MATR3P43243 847 aaKnown RBP eCLIP18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 RBL2Q08999 1139 aa18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 ATF7IP2Q5U623 682 aa18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 ZNF410Q86VK4 478 aa18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 GPD1LQ8N335 351 aa18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 TC2NQ8N9U0 490 aa18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 DEFB118Q96PH6 123 aa18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 BAG1Q99933 345 aaPredicted RBP18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 PTPRHQ9HD43 1115 aa18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 PPP2R2CQ9Y2T4 447 aa18.86■□□□□ 0.61
PPFIA3-207ENST00000602716 CNTNAP2Q9UHC6 1331 aa18.85■□□□□ 0.61
PPFIA3-207ENST00000602716 KAT6AQ92794 2004 aa18.85■□□□□ 0.61
PPFIA3-207ENST00000602716 TULP1O00294 542 aaPredicted RBP18.85■□□□□ 0.61
PPFIA3-207ENST00000602716 STX10O60499 249 aa18.85■□□□□ 0.61
PPFIA3-207ENST00000602716 TOM1L1O75674 476 aa18.85■□□□□ 0.61
PPFIA3-207ENST00000602716 H2AFXP16104 143 aaPredicted RBP18.85■□□□□ 0.61
PPFIA3-207ENST00000602716 ARF4P18085 180 aaPredicted RBP18.85■□□□□ 0.61
PPFIA3-207ENST00000602716 ADKP55263 362 aaKnown RBP18.85■□□□□ 0.61
PPFIA3-207ENST00000602716 CYP24A1Q07973 514 aa18.85■□□□□ 0.61
PPFIA3-207ENST00000602716 PPP3CAQ08209 521 aa18.85■□□□□ 0.61
PPFIA3-207ENST00000602716 ITGA7Q13683 1181 aa18.85■□□□□ 0.61
PPFIA3-207ENST00000602716 ERCC6LQ2NKX8 1250 aa18.85■□□□□ 0.61
PPFIA3-207ENST00000602716 FKBP15Q5T1M5 1219 aa18.85■□□□□ 0.61
PPFIA3-207ENST00000602716 TSHZ1Q6ZSZ6 1077 aa18.85■□□□□ 0.61
PPFIA3-207ENST00000602716 VTI1AQ96AJ9 217 aa18.85■□□□□ 0.61
PPFIA3-207ENST00000602716 TRMT13Q9NUP7 481 aaKnown RBP18.85■□□□□ 0.61
PPFIA3-207ENST00000602716 PRMT7Q9NVM4 692 aaPredicted RBP18.85■□□□□ 0.61
PPFIA3-207ENST00000602716 FAM53CQ9NYF3 392 aa18.85■□□□□ 0.61
PPFIA3-207ENST00000602716 CTSHP09668 335 aa18.84■□□□□ 0.61
PPFIA3-207ENST00000602716 GNAT1P11488 350 aa18.84■□□□□ 0.61
PPFIA3-207ENST00000602716 CCL5P13501 91 aa18.84■□□□□ 0.61
PPFIA3-207ENST00000602716 FAM187BQ17R55 369 aa18.84■□□□□ 0.61
PPFIA3-207ENST00000602716 SERINC5Q86VE9 423 aa18.84■□□□□ 0.61
PPFIA3-207ENST00000602716 SESTD1Q86VW0 696 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms