RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 LPLP06858 475 aa3.83□□□□□ -1.8
SGMS1-207ENST00000602619 PDGFRBP09619 1106 aa3.83□□□□□ -1.8
SGMS1-207ENST00000602619 LTA4HP09960 611 aaKnown RBP3.83□□□□□ -1.8
SGMS1-207ENST00000602619 XPAP23025 273 aaPredicted RBP3.83□□□□□ -1.8
SGMS1-207ENST00000602619 SLC5A3P53794 718 aa3.83□□□□□ -1.8
SGMS1-207ENST00000602619 EVA1CP58658 441 aa3.83□□□□□ -1.8
SGMS1-207ENST00000602619 ANAPC15P60006 121 aa3.83□□□□□ -1.8
SGMS1-207ENST00000602619 SRSF2Q01130 221 aaKnown RBP3.83□□□□□ -1.8
SGMS1-207ENST00000602619 FSTL1Q12841 308 aa3.83□□□□□ -1.8
SGMS1-207ENST00000602619 MALLQ13021 153 aa3.83□□□□□ -1.8
SGMS1-207ENST00000602619 MST1LQ2TV78 715 aa3.83□□□□□ -1.8
SGMS1-207ENST00000602619 TMEM240Q5SV17 173 aa3.83□□□□□ -1.8
SGMS1-207ENST00000602619 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
SGMS1-207ENST00000602619 BTNL9Q6UXG8 535 aa3.83□□□□□ -1.8
SGMS1-207ENST00000602619 GPR135Q8IZ08 494 aa3.83□□□□□ -1.8
SGMS1-207ENST00000602619 GPR150Q8NGU9 434 aa3.83□□□□□ -1.8
SGMS1-207ENST00000602619 TGFBRAP1Q8WUH2 860 aa3.83□□□□□ -1.8
SGMS1-207ENST00000602619 SNX33Q8WV41 574 aa3.83□□□□□ -1.8
SGMS1-207ENST00000602619 GCDHQ92947 438 aaPredicted RBP3.83□□□□□ -1.8
SGMS1-207ENST00000602619 FAXDC2Q96IV6 333 aa3.83□□□□□ -1.8
SGMS1-207ENST00000602619 CHMP4AQ9BY43 222 aa3.83□□□□□ -1.8
SGMS1-207ENST00000602619 C12orf65Q9H3J6 166 aaKnown RBP3.83□□□□□ -1.8
SGMS1-207ENST00000602619 AGO3Q9H9G7 860 aaKnown RBP3.83□□□□□ -1.8
SGMS1-207ENST00000602619 IFT122Q9HBG6 1241 aa3.83□□□□□ -1.8
SGMS1-207ENST00000602619 TCF7L1Q9HCS4 588 aa3.83□□□□□ -1.8
SGMS1-207ENST00000602619 AURKAIP1Q9NWT8 199 aaPredicted RBP3.83□□□□□ -1.8
SGMS1-207ENST00000602619 PLA2G3Q9NZ20 509 aa3.83□□□□□ -1.8
SGMS1-207ENST00000602619 DPP7Q9UHL4 492 aa3.83□□□□□ -1.8
SGMS1-207ENST00000602619 PUF60Q9UHX1 559 aaKnown RBP3.83□□□□□ -1.8
SGMS1-207ENST00000602619 MAGEL2Q9UJ55 1249 aa3.83□□□□□ -1.8
SGMS1-207ENST00000602619 GPR45Q9Y5Y3 372 aa3.83□□□□□ -1.8
SGMS1-207ENST00000602619 TNKSO95271 1327 aa3.83□□□□□ -1.8
SGMS1-207ENST00000602619 NRP1O14786 923 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 DAPK3O43293 454 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 PCDHGA12O60330 932 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 TOX4O94842 621 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 PROZP22891 400 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 CTSSP25774 331 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 MSX2P35548 267 aaPredicted RBP3.82□□□□□ -1.8
SGMS1-207ENST00000602619 RPS19P39019 145 aaKnown RBP3.82□□□□□ -1.8
SGMS1-207ENST00000602619 MCAMP43121 646 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 BPIFB4P59827 614 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 ITKQ08881 620 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 MGAT5Q09328 741 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 MGAT2Q10469 447 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 RIN1Q13671 783 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 FAM50AQ14320 339 aaKnown RBP3.82□□□□□ -1.8
SGMS1-207ENST00000602619 ABCB5Q2M3G0 1257 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 LMBR1LQ6UX01 489 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 BHLHA9Q7RTU4 235 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 TMPRSS6Q8IU80 811 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 ANKRD13AQ8IZ07 590 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 LILRA3Q8N6C8 439 aaPredicted RBP3.82□□□□□ -1.8
SGMS1-207ENST00000602619 GLB1L3Q8NCI6 653 aaPredicted RBP3.82□□□□□ -1.8
SGMS1-207ENST00000602619 SHCBP1Q8NEM2 672 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 OR14K1Q8NGZ2 314 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 FATE1Q969F0 183 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 CHMP4CQ96CF2 233 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 MTMR8Q96EF0 704 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 FUBP3Q96I24 572 aaKnown RBP eCLIP3.82□□□□□ -1.8
SGMS1-207ENST00000602619 POLR3GLQ9BT43 218 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 QRSL1Q9H0R6 528 aaKnown RBP3.82□□□□□ -1.8
SGMS1-207ENST00000602619 CCDC8Q9H0W5 538 aaPredicted RBP3.82□□□□□ -1.8
SGMS1-207ENST00000602619 DNAJC28Q9NX36 388 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 USP18Q9UMW8 372 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 EDARQ9UNE0 448 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 PCDHGA9Q9Y5G4 932 aaKnown RBP3.82□□□□□ -1.8
SGMS1-207ENST00000602619 PCDHGA8Q9Y5G5 932 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 PCDHGA7Q9Y5G6 932 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 PCDHGA6Q9Y5G7 932 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 PCDHGA3Q9Y5H0 932 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 PCDHGA2Q9Y5H1 932 aa3.82□□□□□ -1.8
SGMS1-207ENST00000602619 TMEM191CA6NGB0 347 aa3.81□□□□□ -1.8
SGMS1-207ENST00000602619 ALDH1A2O94788 518 aa3.81□□□□□ -1.8
SGMS1-207ENST00000602619 NEK2P51955 445 aa3.81□□□□□ -1.8
SGMS1-207ENST00000602619 ATP2C1P98194 919 aaPredicted RBP3.81□□□□□ -1.8
SGMS1-207ENST00000602619 PPP3CAQ08209 521 aa3.81□□□□□ -1.8
SGMS1-207ENST00000602619 TOR2AQ5JU69 321 aa3.81□□□□□ -1.8
SGMS1-207ENST00000602619 ZKSCAN2Q63HK3 967 aa3.81□□□□□ -1.8
SGMS1-207ENST00000602619 SGMS1Q86VZ5 419 aa3.81□□□□□ -1.8
SGMS1-207ENST00000602619 AMOTL1Q8IY63 956 aa3.81□□□□□ -1.8
SGMS1-207ENST00000602619 CMTM4Q8IZR5 234 aa3.81□□□□□ -1.8
SGMS1-207ENST00000602619 MSL3Q8N5Y2 521 aaKnown RBP3.81□□□□□ -1.8
SGMS1-207ENST00000602619 UIMC1Q96RL1 719 aa3.81□□□□□ -1.8
SGMS1-207ENST00000602619 CAMKK2Q96RR4 588 aa3.81□□□□□ -1.8
SGMS1-207ENST00000602619 GREM2Q9H772 168 aa3.81□□□□□ -1.8
SGMS1-207ENST00000602619 IL23AQ9NPF7 189 aa3.81□□□□□ -1.8
SGMS1-207ENST00000602619 PARPBPQ9NWS1 579 aa3.81□□□□□ -1.8
SGMS1-207ENST00000602619 FAM184BQ9ULE4 1060 aa3.81□□□□□ -1.8
SGMS1-207ENST00000602619 RBM8AQ9Y5S9 174 aaKnown RBP3.81□□□□□ -1.8
SGMS1-207ENST00000602619 RPTORQ8N122 1335 aa3.8□□□□□ -1.8
SGMS1-207ENST00000602619 PHF2O75151 1096 aa3.8□□□□□ -1.8
SGMS1-207ENST00000602619 ABLIM3O94929 683 aa3.8□□□□□ -1.8
SGMS1-207ENST00000602619 ZRANB2O95218 330 aaKnown RBP eCLIP3.8□□□□□ -1.8
SGMS1-207ENST00000602619 PEX11BO96011 259 aa3.8□□□□□ -1.8
SGMS1-207ENST00000602619 GASTP01350 101 aa3.8□□□□□ -1.8
SGMS1-207ENST00000602619 CRHR1P34998 444 aa3.8□□□□□ -1.8
SGMS1-207ENST00000602619 UBE3CQ15386 1083 aa3.8□□□□□ -1.8
SGMS1-207ENST00000602619 PLEKHG6Q3KR16 790 aa3.8□□□□□ -1.8
SGMS1-207ENST00000602619 MUM1L1Q5H9M0 696 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms