RNA–Protein interactions for RNA: ENST00000601849.1

VRK3-224, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-224ENST00000601849 ZC3H14Q6PJT7 736 aaKnown RBP10.63□□□□□ -0.71
VRK3-224ENST00000601849 ASCL5Q7RTU5 278 aa10.63□□□□□ -0.71
VRK3-224ENST00000601849 TAS1R1Q7RTX1 841 aa10.63□□□□□ -0.71
VRK3-224ENST00000601849 FRMD5Q7Z6J6 570 aa10.63□□□□□ -0.71
VRK3-224ENST00000601849 POTEDQ86YR6 584 aa10.63□□□□□ -0.71
VRK3-224ENST00000601849 IFNLR1Q8IU57 520 aaPredicted RBP10.63□□□□□ -0.71
VRK3-224ENST00000601849 ZBTB8OSQ8IWT0 167 aa10.63□□□□□ -0.71
VRK3-224ENST00000601849 CCDC105Q8IYK2 499 aa10.63□□□□□ -0.71
VRK3-224ENST00000601849 SLC44A3Q8N4M1 653 aa10.63□□□□□ -0.71
VRK3-224ENST00000601849 HAS1Q92839 578 aa10.63□□□□□ -0.71
VRK3-224ENST00000601849 SHDQ96IW2 340 aa10.63□□□□□ -0.71
VRK3-224ENST00000601849 CPB2Q96IY4 423 aa10.63□□□□□ -0.71
VRK3-224ENST00000601849 PRIMPOLQ96LW4 560 aa10.63□□□□□ -0.71
VRK3-224ENST00000601849 EIF2AK1Q9BQI3 630 aaKnown RBP10.63□□□□□ -0.71
VRK3-224ENST00000601849 VN1R3Q9BXE9 311 aa10.63□□□□□ -0.71
VRK3-224ENST00000601849 EIF2AQ9BY44 585 aaKnown RBP10.63□□□□□ -0.71
VRK3-224ENST00000601849 NT5C3AQ9H0P0 336 aa10.63□□□□□ -0.71
VRK3-224ENST00000601849 TTC12Q9H892 705 aaPredicted RBP10.63□□□□□ -0.71
VRK3-224ENST00000601849 CHST7Q9NS84 486 aa10.63□□□□□ -0.71
VRK3-224ENST00000601849 EPS15L1Q9UBC2 864 aa10.63□□□□□ -0.71
VRK3-224ENST00000601849 ORC3Q9UBD5 711 aaPredicted RBP10.63□□□□□ -0.71
VRK3-224ENST00000601849 ADAM28Q9UKQ2 775 aa10.63□□□□□ -0.71
VRK3-224ENST00000601849 SF3B1O75533 1304 aaKnown RBP eCLIP10.62□□□□□ -0.71
VRK3-224ENST00000601849 A0A1B0GUA9 196 aa10.62□□□□□ -0.71
VRK3-224ENST00000601849 TGM5O43548 720 aa10.62□□□□□ -0.71
VRK3-224ENST00000601849 PFKFB2O60825 505 aa10.62□□□□□ -0.71
VRK3-224ENST00000601849 LYPLA2O95372 231 aa10.62□□□□□ -0.71
VRK3-224ENST00000601849 SPATA31D3P0C874 917 aa10.62□□□□□ -0.71
VRK3-224ENST00000601849 TXKP42681 527 aa10.62□□□□□ -0.71
VRK3-224ENST00000601849 DSC1Q08554 894 aa10.62□□□□□ -0.71
VRK3-224ENST00000601849 ELAVL2Q12926 359 aaKnown RBP10.62□□□□□ -0.71
VRK3-224ENST00000601849 GRIK3Q13003 919 aa10.62□□□□□ -0.71
VRK3-224ENST00000601849 LIN9Q5TKA1 542 aa10.62□□□□□ -0.71
VRK3-224ENST00000601849 FUT10Q6P4F1 479 aa10.62□□□□□ -0.71
VRK3-224ENST00000601849 SPATA31D4Q6ZUB0 917 aa10.62□□□□□ -0.71
VRK3-224ENST00000601849 ERMP1Q7Z2K6 904 aa10.62□□□□□ -0.71
VRK3-224ENST00000601849 APBB1IPQ7Z5R6 666 aaPredicted RBP10.62□□□□□ -0.71
VRK3-224ENST00000601849 ADSSL1Q8N142 457 aa10.62□□□□□ -0.71
VRK3-224ENST00000601849 MCPH1Q8NEM0 835 aa10.62□□□□□ -0.71
VRK3-224ENST00000601849 RIN2Q8WYP3 895 aaPredicted RBP10.62□□□□□ -0.71
VRK3-224ENST00000601849 HSD17B14Q9BPX1 270 aa10.62□□□□□ -0.71
VRK3-224ENST00000601849 ADPGKQ9BRR6 497 aa10.62□□□□□ -0.71
VRK3-224ENST00000601849 PRKD2Q9BZL6 878 aa10.62□□□□□ -0.71
VRK3-224ENST00000601849 C2orf40Q9H1Z8 148 aa10.62□□□□□ -0.71
VRK3-224ENST00000601849 RNF39Q9H2S5 420 aa10.62□□□□□ -0.71
VRK3-224ENST00000601849 PRMT7Q9NVM4 692 aaPredicted RBP10.62□□□□□ -0.71
VRK3-224ENST00000601849 MARCH5Q9NX47 278 aa10.62□□□□□ -0.71
VRK3-224ENST00000601849 WRAP73Q9P2S5 460 aaPredicted RBP10.62□□□□□ -0.71
VRK3-224ENST00000601849 SIT1Q9Y3P8 196 aa10.62□□□□□ -0.71
VRK3-224ENST00000601849 HES2Q9Y543 173 aa10.62□□□□□ -0.71
VRK3-224ENST00000601849 MYO10Q9HD67 2058 aa10.61□□□□□ -0.71
VRK3-224ENST00000601849 LRRIQ4A6NIV6 560 aa10.61□□□□□ -0.71
VRK3-224ENST00000601849 ZBTB39O15060 712 aa10.61□□□□□ -0.71
VRK3-224ENST00000601849 PI15O43692 258 aa10.61□□□□□ -0.71
VRK3-224ENST00000601849 B4GALT3O60512 393 aa10.61□□□□□ -0.71
VRK3-224ENST00000601849 NEMFO60524 1076 aa10.61□□□□□ -0.71
VRK3-224ENST00000601849 XYLBO75191 536 aa10.61□□□□□ -0.71
VRK3-224ENST00000601849 RFPL2O75678 378 aa10.61□□□□□ -0.71
VRK3-224ENST00000601849 NPTXRO95502 500 aa10.61□□□□□ -0.71
VRK3-224ENST00000601849 LMNAP02545 664 aaKnown RBP10.61□□□□□ -0.71
VRK3-224ENST00000601849 THP07101 528 aa10.61□□□□□ -0.71
VRK3-224ENST00000601849 MYBP10242 640 aa10.61□□□□□ -0.71
VRK3-224ENST00000601849 LAMP2P13473 410 aa10.61□□□□□ -0.71
VRK3-224ENST00000601849 NPR3P17342 541 aa10.61□□□□□ -0.71
VRK3-224ENST00000601849 ARF4P18085 180 aaPredicted RBP10.61□□□□□ -0.71
VRK3-224ENST00000601849 ATP2B1P20020 1258 aa10.61□□□□□ -0.71
VRK3-224ENST00000601849 AKAP5P24588 427 aa10.61□□□□□ -0.71
VRK3-224ENST00000601849 ARL2P36404 184 aa10.61□□□□□ -0.71
VRK3-224ENST00000601849 ID4P47928 161 aa10.61□□□□□ -0.71
VRK3-224ENST00000601849 MBTD1Q05BQ5 628 aa10.61□□□□□ -0.71
VRK3-224ENST00000601849 CAPSQ13938 189 aa10.61□□□□□ -0.71
VRK3-224ENST00000601849 HSP90AA2PQ14568 343 aaPredicted RBP10.61□□□□□ -0.71
VRK3-224ENST00000601849 SAFBQ15424 915 aaKnown RBP eCLIP10.61□□□□□ -0.71
VRK3-224ENST00000601849 CWF19L1Q69YN2 538 aaKnown RBP10.61□□□□□ -0.71
VRK3-224ENST00000601849 PHLDB3Q6NSJ2 640 aa10.61□□□□□ -0.71
VRK3-224ENST00000601849 GET4Q7L5D6 327 aaPredicted RBP10.61□□□□□ -0.71
VRK3-224ENST00000601849 CEP57Q86XR8 500 aa10.61□□□□□ -0.71
VRK3-224ENST00000601849 GLYCTKQ8IVS8 523 aa10.61□□□□□ -0.71
VRK3-224ENST00000601849 BORCS6Q96GS4 357 aa10.61□□□□□ -0.71
VRK3-224ENST00000601849 ZFP42Q96MM3 310 aa10.61□□□□□ -0.71
VRK3-224ENST00000601849 NACC1Q96RE7 527 aa10.61□□□□□ -0.71
VRK3-224ENST00000601849 MIOSQ9NXC5 875 aa10.61□□□□□ -0.71
VRK3-224ENST00000601849 CA14Q9ULX7 337 aa10.61□□□□□ -0.71
VRK3-224ENST00000601849 ZMYM2Q9UBW7 1377 aa10.61□□□□□ -0.71
VRK3-224ENST00000601849 NARSO43776 548 aaKnown RBP10.6□□□□□ -0.71
VRK3-224ENST00000601849 ZMYND10O75800 440 aa10.6□□□□□ -0.71
VRK3-224ENST00000601849 HNRNPA1P09651 372 aaKnown RBP eCLIP10.6□□□□□ -0.71
VRK3-224ENST00000601849 FSHRP23945 695 aa10.6□□□□□ -0.71
VRK3-224ENST00000601849 RARRES1P49788 294 aa10.6□□□□□ -0.71
VRK3-224ENST00000601849 TUSC3Q13454 348 aa10.6□□□□□ -0.71
VRK3-224ENST00000601849 MAPK6Q16659 721 aa10.6□□□□□ -0.71
VRK3-224ENST00000601849 PPM1LQ5SGD2 360 aa10.6□□□□□ -0.71
VRK3-224ENST00000601849 DCLRE1AQ6PJP8 1040 aa10.6□□□□□ -0.71
VRK3-224ENST00000601849 MTSS1LQ765P7 747 aa10.6□□□□□ -0.71
VRK3-224ENST00000601849 RNF168Q8IYW5 571 aaPredicted RBP10.6□□□□□ -0.71
VRK3-224ENST00000601849 ERMNQ8TAM6 284 aa10.6□□□□□ -0.71
VRK3-224ENST00000601849 OXER1Q8TDS5 423 aa10.6□□□□□ -0.71
VRK3-224ENST00000601849 RSAD2Q8WXG1 361 aa10.6□□□□□ -0.71
VRK3-224ENST00000601849 TTPALQ9BTX7 342 aa10.6□□□□□ -0.71
VRK3-224ENST00000601849 GPR62Q9BZJ7 368 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms