RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 TRAK2O60296 914 aa14.06□□□□□ -0.16
USE1-209ENST00000601592 FGF18O76093 207 aa14.06□□□□□ -0.16
USE1-209ENST00000601592 MAPTP10636 758 aaKnown RBP14.06□□□□□ -0.16
USE1-209ENST00000601592 POU3F3P20264 500 aaPredicted RBP14.06□□□□□ -0.16
USE1-209ENST00000601592 PPM1AP35813 382 aa14.06□□□□□ -0.16
USE1-209ENST00000601592 ALDH7A1P49419 539 aaKnown RBP14.06□□□□□ -0.16
USE1-209ENST00000601592 SCNN1GP51170 649 aa14.06□□□□□ -0.16
USE1-209ENST00000601592 AFF1P51825 1210 aaKnown RBP14.06□□□□□ -0.16
USE1-209ENST00000601592 ZNF131P52739 623 aa14.06□□□□□ -0.16
USE1-209ENST00000601592 NCKAP1LP55160 1127 aa14.06□□□□□ -0.16
USE1-209ENST00000601592 BCAR1P56945 870 aa14.06□□□□□ -0.16
USE1-209ENST00000601592 TIGD5Q53EQ6 642 aa14.06□□□□□ -0.16
USE1-209ENST00000601592 RESP18Q5W5W9 173 aa14.06□□□□□ -0.16
USE1-209ENST00000601592 HAUS6Q7Z4H7 955 aa14.06□□□□□ -0.16
USE1-209ENST00000601592 SFR1Q86XK3 245 aa14.06□□□□□ -0.16
USE1-209ENST00000601592 IQUBQ8NA54 791 aa14.06□□□□□ -0.16
USE1-209ENST00000601592 POF1BQ8WVV4 589 aa14.06□□□□□ -0.16
USE1-209ENST00000601592 RSPH1Q8WYR4 309 aa14.06□□□□□ -0.16
USE1-209ENST00000601592 ZFP42Q96MM3 310 aa14.06□□□□□ -0.16
USE1-209ENST00000601592 ACO2Q99798 780 aaKnown RBP14.06□□□□□ -0.16
USE1-209ENST00000601592 NTPCRQ9BSD7 190 aaKnown RBP14.06□□□□□ -0.16
USE1-209ENST00000601592 LMAN2LQ9H0V9 348 aa14.06□□□□□ -0.16
USE1-209ENST00000601592 GDPD2Q9HCC8 539 aa14.06□□□□□ -0.16
USE1-209ENST00000601592 KANSL3Q9P2N6 904 aa14.06□□□□□ -0.16
USE1-209ENST00000601592 GIT1Q9Y2X7 761 aa14.06□□□□□ -0.16
USE1-209ENST00000601592 PDCD11Q14690 1871 aaKnown RBP14.06□□□□□ -0.16
USE1-209ENST00000601592 RECQL4O94761 1208 aa14.05□□□□□ -0.16
USE1-209ENST00000601592 NMT1P30419 496 aaKnown RBP14.05□□□□□ -0.16
USE1-209ENST00000601592 OSTNP61366 133 aa14.05□□□□□ -0.16
USE1-209ENST00000601592 SPPL3Q8TCT6 385 aa14.05□□□□□ -0.16
USE1-209ENST00000601592 SCAND2PQ9GZW5 306 aaPredicted RBP14.05□□□□□ -0.16
USE1-209ENST00000601592 TNMDQ9H2S6 317 aa14.05□□□□□ -0.16
USE1-209ENST00000601592 CUEDC2Q9H467 287 aa14.05□□□□□ -0.16
USE1-209ENST00000601592 NRDE2Q9H7Z3 1164 aa14.05□□□□□ -0.16
USE1-209ENST00000601592 SPG21Q9NZD8 308 aa14.05□□□□□ -0.16
USE1-209ENST00000601592 TBC1D7Q9P0N9 293 aa14.05□□□□□ -0.16
USE1-209ENST00000601592 DNAJB4Q9UDY4 337 aa14.05□□□□□ -0.16
USE1-209ENST00000601592 TNFSF13BQ9Y275 285 aa14.05□□□□□ -0.16
USE1-209ENST00000601592 REV3LO60673 3130 aa14.05□□□□□ -0.16
USE1-209ENST00000601592 HNRNPDLO14979 420 aaKnown RBP14.04□□□□□ -0.16
USE1-209ENST00000601592 GAP43P17677 238 aa14.04□□□□□ -0.16
USE1-209ENST00000601592 DNAJB1P25685 340 aa14.04□□□□□ -0.16
USE1-209ENST00000601592 CA8P35219 290 aa14.04□□□□□ -0.16
USE1-209ENST00000601592 LIG4P49917 911 aa14.04□□□□□ -0.16
USE1-209ENST00000601592 ASIC1P78348 528 aa14.04□□□□□ -0.16
USE1-209ENST00000601592 AMPD3Q01432 767 aa14.04□□□□□ -0.16
USE1-209ENST00000601592 KRT17Q04695 432 aa14.04□□□□□ -0.16
USE1-209ENST00000601592 E2F4Q16254 413 aa14.04□□□□□ -0.16
USE1-209ENST00000601592 MPZL3Q6UWV2 235 aa14.04□□□□□ -0.16
USE1-209ENST00000601592 EP400NLQ6ZTU2 488 aa14.04□□□□□ -0.16
USE1-209ENST00000601592 ZNF280BQ86YH2 543 aa14.04□□□□□ -0.16
USE1-209ENST00000601592 CEP57L1Q8IYX8 460 aa14.04□□□□□ -0.16
USE1-209ENST00000601592 MICAL1Q8TDZ2 1067 aa14.04□□□□□ -0.16
USE1-209ENST00000601592 TMEM169Q96HH4 297 aa14.04□□□□□ -0.16
USE1-209ENST00000601592 ZBTB45Q96K62 511 aaPredicted RBP14.04□□□□□ -0.16
USE1-209ENST00000601592 LRRC27Q9C0I9 530 aa14.04□□□□□ -0.16
USE1-209ENST00000601592 CDT1Q9H211 546 aa14.04□□□□□ -0.16
USE1-209ENST00000601592 NSUN3Q9H649 340 aaKnown RBP14.04□□□□□ -0.16
USE1-209ENST00000601592 MRPL44Q9H9J2 332 aaKnown RBP14.04□□□□□ -0.16
USE1-209ENST00000601592 PRDM6Q9NQX0 595 aa14.04□□□□□ -0.16
USE1-209ENST00000601592 ENTPD7Q9NQZ7 604 aa14.04□□□□□ -0.16
USE1-209ENST00000601592 PUF60Q9UHX1 559 aaKnown RBP14.04□□□□□ -0.16
USE1-209ENST00000601592 KCNH3Q9ULD8 1083 aa14.04□□□□□ -0.16
USE1-209ENST00000601592 PRG3Q9Y2Y8 225 aaPredicted RBP14.04□□□□□ -0.16
USE1-209ENST00000601592 PRUNE2Q8WUY3 3088 aa14.04□□□□□ -0.16
USE1-209ENST00000601592 BRWD1Q9NSI6 2320 aa14.03□□□□□ -0.16
USE1-209ENST00000601592 A0A1B0GVL5 298 aa14.03□□□□□ -0.16
USE1-209ENST00000601592 B4GALT3O60512 393 aa14.03□□□□□ -0.16
USE1-209ENST00000601592 DDHD2O94830 711 aa14.03□□□□□ -0.16
USE1-209ENST00000601592 GCNT3O95395 438 aa14.03□□□□□ -0.16
USE1-209ENST00000601592 GALTP07902 379 aa14.03□□□□□ -0.16
USE1-209ENST00000601592 AFMP43652 599 aa14.03□□□□□ -0.16
USE1-209ENST00000601592 OR1G1P47890 313 aa14.03□□□□□ -0.16
USE1-209ENST00000601592 SLC11A1P49279 550 aa14.03□□□□□ -0.16
USE1-209ENST00000601592 YARSP54577 528 aaKnown RBP14.03□□□□□ -0.16
USE1-209ENST00000601592 UBE3AQ05086 875 aa14.03□□□□□ -0.16
USE1-209ENST00000601592 NOLC1Q14978 699 aaKnown RBP eCLIP14.03□□□□□ -0.16
USE1-209ENST00000601592 HERC4Q5GLZ8 1057 aaPredicted RBP14.03□□□□□ -0.16
USE1-209ENST00000601592 TCEAL5Q5H9L2 206 aa14.03□□□□□ -0.16
USE1-209ENST00000601592 PLPP4Q5VZY2 271 aa14.03□□□□□ -0.16
USE1-209ENST00000601592 ADALQ6DHV7 355 aa14.03□□□□□ -0.16
USE1-209ENST00000601592 CCDC65Q8IXS2 484 aa14.03□□□□□ -0.16
USE1-209ENST00000601592 SLC39A11Q8N1S5 342 aa14.03□□□□□ -0.16
USE1-209ENST00000601592 CEP120Q8N960 986 aa14.03□□□□□ -0.16
USE1-209ENST00000601592 SLC17A8Q8NDX2 589 aa14.03□□□□□ -0.16
USE1-209ENST00000601592 MRPS27Q92552 414 aaKnown RBP14.03□□□□□ -0.16
USE1-209ENST00000601592 DNAJC19Q96DA6 116 aa14.03□□□□□ -0.16
USE1-209ENST00000601592 PYM1Q9BRP8 204 aaKnown RBP14.03□□□□□ -0.16
USE1-209ENST00000601592 CCDC94Q9BW85 323 aaPredicted RBP14.03□□□□□ -0.16
USE1-209ENST00000601592 TLR9Q9NR96 1032 aa14.03□□□□□ -0.16
USE1-209ENST00000601592 PANK4Q9NVE7 773 aa14.03□□□□□ -0.16
USE1-209ENST00000601592 MIOSQ9NXC5 875 aa14.03□□□□□ -0.16
USE1-209ENST00000601592 SEL1LQ9UBV2 794 aa14.03□□□□□ -0.16
USE1-209ENST00000601592 TBX20Q9UMR3 447 aa14.03□□□□□ -0.16
USE1-209ENST00000601592 PCDHGC5Q9Y5F6 944 aa14.03□□□□□ -0.16
USE1-209ENST00000601592 ZMYM2Q9UBW7 1377 aa14.02□□□□□ -0.17
USE1-209ENST00000601592 CLDN3O15551 220 aa14.02□□□□□ -0.17
USE1-209ENST00000601592 TOM1L1O75674 476 aa14.02□□□□□ -0.17
USE1-209ENST00000601592 MCF2P10911 925 aa14.02□□□□□ -0.17
USE1-209ENST00000601592 PFKFB1P16118 471 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms