RNA–Protein interactions for RNA: ENST00000600840.1

TRIM28-214, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 338 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-214ENST00000600840 THNSL1Q8IYQ7 743 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 PDILTQ8N807 584 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 FEZF2Q8TBJ5 459 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 GPT2Q8TD30 523 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 HELQQ8TDG4 1101 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 MICAL1Q8TDZ2 1067 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 NLRP7Q8WX94 980 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 LPPQ93052 612 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 CALML4Q96GE6 196 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 APOL5Q9BWW9 433 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 TMEM117Q9H0C3 514 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 BHMT2Q9H2M3 363 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 MINDY3Q9H8M7 445 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 BMP2KQ9NSY1 1161 aaPredicted RBP9.68□□□□□ -0.86
TRIM28-214ENST00000600840 FAM13BQ9NYF5 915 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 SUCLA2Q9P2R7 463 aaPredicted RBP9.68□□□□□ -0.86
TRIM28-214ENST00000600840 STK17AQ9UEE5 414 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 CCDC39Q9UFE4 941 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 CDH22Q9UJ99 828 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 PPME1Q9Y570 386 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 PCDHB12Q9Y5F1 795 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 FAM186AA6NE01 2351 aa9.68□□□□□ -0.86
TRIM28-214ENST00000600840 MYO10Q9HD67 2058 aa9.67□□□□□ -0.86
TRIM28-214ENST00000600840 ZSCAN20P17040 1043 aaPredicted RBP9.67□□□□□ -0.86
TRIM28-214ENST00000600840 GUCY2CP25092 1073 aa9.67□□□□□ -0.86
TRIM28-214ENST00000600840 ARL2P36404 184 aa9.67□□□□□ -0.86
TRIM28-214ENST00000600840 SYKP43405 635 aa9.67□□□□□ -0.86
TRIM28-214ENST00000600840 AFF1P51825 1210 aaKnown RBP9.67□□□□□ -0.86
TRIM28-214ENST00000600840 EHHADHQ08426 723 aa9.67□□□□□ -0.86
TRIM28-214ENST00000600840 GIT2Q14161 759 aa9.67□□□□□ -0.86
TRIM28-214ENST00000600840 DUSP6Q16828 381 aa9.67□□□□□ -0.86
TRIM28-214ENST00000600840 XKR9Q5GH70 373 aa9.67□□□□□ -0.86
TRIM28-214ENST00000600840 PADI6Q6TGC4 694 aa9.67□□□□□ -0.86
TRIM28-214ENST00000600840 KRBA2Q6ZNG9 492 aa9.67□□□□□ -0.86
TRIM28-214ENST00000600840 TMEM173Q86WV6 379 aaPredicted RBP9.67□□□□□ -0.86
TRIM28-214ENST00000600840 RHPN2Q8IUC4 686 aa9.67□□□□□ -0.86
TRIM28-214ENST00000600840 IQUBQ8NA54 791 aa9.67□□□□□ -0.86
TRIM28-214ENST00000600840 SPATA20Q8TB22 786 aa9.67□□□□□ -0.86
TRIM28-214ENST00000600840 SUSD6Q92537 303 aa9.67□□□□□ -0.86
TRIM28-214ENST00000600840 LARP4BQ92615 738 aaKnown RBP9.67□□□□□ -0.86
TRIM28-214ENST00000600840 TMEM143Q96AN5 459 aa9.67□□□□□ -0.86
TRIM28-214ENST00000600840 DHX58Q96C10 678 aa9.67□□□□□ -0.86
TRIM28-214ENST00000600840 CEP170P1Q96L14 293 aa9.67□□□□□ -0.86
TRIM28-214ENST00000600840 TIGD1Q96MW7 591 aa9.67□□□□□ -0.86
TRIM28-214ENST00000600840 SCLT1Q96NL6 688 aa9.67□□□□□ -0.86
TRIM28-214ENST00000600840 CNTNAP3BQ96NU0 1288 aa9.67□□□□□ -0.86
TRIM28-214ENST00000600840 C7orf25Q9BPX7 421 aa9.67□□□□□ -0.86
TRIM28-214ENST00000600840 RUSC1Q9BVN2 902 aa9.67□□□□□ -0.86
TRIM28-214ENST00000600840 CNTNAP3Q9BZ76 1288 aa9.67□□□□□ -0.86
TRIM28-214ENST00000600840 CUEDC2Q9H467 287 aa9.67□□□□□ -0.86
TRIM28-214ENST00000600840 TLE6Q9H808 572 aa9.67□□□□□ -0.86
TRIM28-214ENST00000600840 IFT122Q9HBG6 1241 aa9.67□□□□□ -0.86
TRIM28-214ENST00000600840 USP25Q9UHP3 1055 aa9.67□□□□□ -0.86
TRIM28-214ENST00000600840 FRMD3A2A2Y4 597 aa9.66□□□□□ -0.86
TRIM28-214ENST00000600840 KLRC4O43908 158 aa9.66□□□□□ -0.86
TRIM28-214ENST00000600840 DGAT1O75907 488 aa9.66□□□□□ -0.86
TRIM28-214ENST00000600840 LAG3P18627 525 aa9.66□□□□□ -0.86
TRIM28-214ENST00000600840 RFC5P40937 340 aa9.66□□□□□ -0.86
TRIM28-214ENST00000600840 PHKA2P46019 1235 aa9.66□□□□□ -0.86
TRIM28-214ENST00000600840 ZNF131P52739 623 aa9.66□□□□□ -0.86
TRIM28-214ENST00000600840 NUBP1P53384 320 aa9.66□□□□□ -0.86
TRIM28-214ENST00000600840 PLCB3Q01970 1234 aa9.66□□□□□ -0.86
TRIM28-214ENST00000600840 UBE3AQ05086 875 aa9.66□□□□□ -0.86
TRIM28-214ENST00000600840 SYCE2Q6PIF2 218 aa9.66□□□□□ -0.86
TRIM28-214ENST00000600840 SLC39A11Q8N1S5 342 aa9.66□□□□□ -0.86
TRIM28-214ENST00000600840 KREMEN2Q8NCW0 462 aa9.66□□□□□ -0.86
TRIM28-214ENST00000600840 BCL7CQ8WUZ0 217 aaPredicted RBP9.66□□□□□ -0.86
TRIM28-214ENST00000600840 STAMQ92783 540 aa9.66□□□□□ -0.86
TRIM28-214ENST00000600840 KCNN1Q92952 543 aa9.66□□□□□ -0.86
TRIM28-214ENST00000600840 PPP2R3CQ969Q6 453 aa9.66□□□□□ -0.86
TRIM28-214ENST00000600840 PAGE5Q96GU1 130 aa9.66□□□□□ -0.86
TRIM28-214ENST00000600840 NLRP4Q96MN2 994 aa9.66□□□□□ -0.86
TRIM28-214ENST00000600840 FIZ1Q96SL8 496 aa9.66□□□□□ -0.86
TRIM28-214ENST00000600840 GCOM2Q9BZD3 368 aaPredicted RBP9.66□□□□□ -0.86
TRIM28-214ENST00000600840 TRIM9Q9C026 710 aa9.66□□□□□ -0.86
TRIM28-214ENST00000600840 S1PR5Q9H228 398 aa9.66□□□□□ -0.86
TRIM28-214ENST00000600840 POLD4Q9HCU8 107 aa9.66□□□□□ -0.86
TRIM28-214ENST00000600840 AAASQ9NRG9 546 aa9.66□□□□□ -0.86
TRIM28-214ENST00000600840 DACT1Q9NYF0 836 aa9.66□□□□□ -0.86
TRIM28-214ENST00000600840 NPHP3-ACAD11A0A0J9YXS1 232 aa9.65□□□□□ -0.86
TRIM28-214ENST00000600840 OFD1O75665 1012 aa9.65□□□□□ -0.86
TRIM28-214ENST00000600840 EOMESO95936 686 aa9.65□□□□□ -0.86
TRIM28-214ENST00000600840 PRR29P0C7W0 189 aa9.65□□□□□ -0.86
TRIM28-214ENST00000600840 SRGAP2CP0DJJ0 459 aa9.65□□□□□ -0.86
TRIM28-214ENST00000600840 CASP1P29466 404 aa9.65□□□□□ -0.86
TRIM28-214ENST00000600840 HOXA11P31270 313 aaPredicted RBP9.65□□□□□ -0.86
TRIM28-214ENST00000600840 TXLNAP40222 546 aa9.65□□□□□ -0.86
TRIM28-214ENST00000600840 STAT6P42226 847 aa9.65□□□□□ -0.86
TRIM28-214ENST00000600840 BCAR1P56945 870 aa9.65□□□□□ -0.86
TRIM28-214ENST00000600840 DPYDQ12882 1025 aa9.65□□□□□ -0.86
TRIM28-214ENST00000600840 GSE1Q14687 1217 aa9.65□□□□□ -0.86
TRIM28-214ENST00000600840 ZRSR1Q15695 479 aaKnown RBP9.65□□□□□ -0.86
TRIM28-214ENST00000600840 UBXN11Q5T124 520 aa9.65□□□□□ -0.86
TRIM28-214ENST00000600840 KANK3Q6NY19 840 aa9.65□□□□□ -0.86
TRIM28-214ENST00000600840 LLGL2Q6P1M3 1020 aa9.65□□□□□ -0.86
TRIM28-214ENST00000600840 AGMOQ6ZNB7 445 aa9.65□□□□□ -0.86
TRIM28-214ENST00000600840 FAM43BQ6ZT52 329 aaPredicted RBP9.65□□□□□ -0.86
TRIM28-214ENST00000600840 SV2BQ7L1I2 683 aa9.65□□□□□ -0.86
TRIM28-214ENST00000600840 DGLUCYQ7Z3D6 616 aa9.65□□□□□ -0.86
TRIM28-214ENST00000600840 GRAMD1CQ8IYS0 662 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms