RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 MYADML2A6NDP7 307 aa19.18■□□□□ 0.66
SHKBP1-224ENST00000600718 PPP3CAQ08209 521 aa19.18■□□□□ 0.66
SHKBP1-224ENST00000600718 PDXDC1Q6P996 788 aa19.18■□□□□ 0.66
SHKBP1-224ENST00000600718 WDR59Q6PJI9 974 aa19.18■□□□□ 0.66
SHKBP1-224ENST00000600718 TCHPQ9BT92 498 aa19.18■□□□□ 0.66
SHKBP1-224ENST00000600718 DAAM1Q9Y4D1 1078 aa19.18■□□□□ 0.66
SHKBP1-224ENST00000600718 TTLL13PA6NNM8 815 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 PGK1P00558 417 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 CYP2C9P11712 490 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 ACTN1P12814 892 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 CCND3P30281 292 aaPredicted RBP19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 GCLMP48507 274 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 GPC3P51654 580 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 PRMT2P55345 433 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 MCL1Q07820 350 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 PSMD6Q15008 389 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 CRELD2Q6UXH1 353 aaPredicted RBP19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 RAD9BQ6WBX8 426 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 SRGAP1Q7Z6B7 1085 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 MTERF4Q7Z6M4 381 aaKnown RBP19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 EHBP1Q8NDI1 1231 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 NLRP7Q8WX94 980 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 CCDC127Q96BQ5 260 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 MINDY3Q9H8M7 445 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 SIX2Q9NPC8 291 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 NLRC4Q9NPP4 1024 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 XPNPEP3Q9NQH7 507 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 C17orf102A2RUQ5 167 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 LRRIQ3A6PVS8 624 aaPredicted RBP19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 ZSCAN12O43309 604 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 UCHL3P15374 230 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 PROZP22891 400 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 NLRP11P59045 1033 aaKnown RBP19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 MAP3K21Q5TCX8 1036 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 ATF7IP2Q5U623 682 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 TRIM65Q6PJ69 517 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 C7orf31Q8N865 590 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 PRIMPOLQ96LW4 560 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 CHP1Q99653 195 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 PTPRHQ9HD43 1115 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 TRMT1Q9NXH9 659 aaKnown RBP19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 MYO6Q9UM54 1294 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 TNFSF13BQ9Y275 285 aa19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 R3HCC1Q9Y3T6 440 aaKnown RBP19.17■□□□□ 0.66
SHKBP1-224ENST00000600718 THSD7BQ9C0I4 1608 aa19.16■□□□□ 0.66
SHKBP1-224ENST00000600718 LRRC53A6NM62 1247 aa19.16■□□□□ 0.66
SHKBP1-224ENST00000600718 ACOT2P49753 483 aa19.16■□□□□ 0.66
SHKBP1-224ENST00000600718 APBA1Q02410 837 aa19.16■□□□□ 0.66
SHKBP1-224ENST00000600718 MPZL3Q6UWV2 235 aa19.16■□□□□ 0.66
SHKBP1-224ENST00000600718 SCLT1Q96NL6 688 aa19.16■□□□□ 0.66
SHKBP1-224ENST00000600718 INTS2Q9H0H0 1204 aaKnown RBP19.16■□□□□ 0.66
SHKBP1-224ENST00000600718 TMEM8AQ9HCN3 771 aa19.16■□□□□ 0.66
SHKBP1-224ENST00000600718 HDAC6Q9UBN7 1215 aa19.16■□□□□ 0.66
SHKBP1-224ENST00000600718 ABLIM1O14639 778 aa19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 OGTO15294 1046 aa19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 ADAMTS4O75173 837 aa19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 IQCF3P0C7M6 154 aa19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 HOXC8P31273 242 aa19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 MXI1P50539 228 aa19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 CLDN10P78369 228 aa19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 MTF1Q14872 753 aa19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 TMEM132AQ24JP5 1023 aa19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 SFMBT2Q5VUG0 894 aa19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 KRT39Q6A163 491 aa19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 ZNF710Q8N1W2 664 aa19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 TMEM117Q9H0C3 514 aa19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 ADAMTS10Q9H324 1103 aa19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 PPP2R2CQ9Y2T4 447 aa19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 EVPLQ92817 2033 aa19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 USP27XA6NNY8 438 aa19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 HIC1Q14526 733 aa19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 AMHR2Q16671 573 aa19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 EPC2Q52LR7 807 aa19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 TOGARAM2Q6ZUX3 1019 aa19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 ZBTB33Q86T24 672 aa19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 CCDC170Q8IYT3 715 aa19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 KLHDC9Q8NEP7 349 aa19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 LMO3Q8TAP4 145 aa19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 ZNF296Q8WUU4 475 aaPredicted RBP19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 FNBP1Q96RU3 617 aa19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 PPP1R16BQ96T49 567 aa19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 FAM49AQ9H0Q0 323 aaPredicted RBP19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 RBAKQ9NYW8 714 aaPredicted RBP19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 COQ4Q9Y3A0 265 aa19.15■□□□□ 0.66
SHKBP1-224ENST00000600718 B4GALT5O43286 388 aa19.14■□□□□ 0.65
SHKBP1-224ENST00000600718 CST5P28325 142 aaPredicted RBP19.14■□□□□ 0.65
SHKBP1-224ENST00000600718 CXCL17Q6UXB2 119 aa19.14■□□□□ 0.65
SHKBP1-224ENST00000600718 RUFY4Q6ZNE9 571 aa19.14■□□□□ 0.65
SHKBP1-224ENST00000600718 NME8Q8N427 588 aa19.14■□□□□ 0.65
SHKBP1-224ENST00000600718 PPP1R13LQ8WUF5 828 aa19.14■□□□□ 0.65
SHKBP1-224ENST00000600718 PPP1R13BQ96KQ4 1090 aa19.14■□□□□ 0.65
SHKBP1-224ENST00000600718 POP1Q99575 1024 aaKnown RBP19.14■□□□□ 0.65
SHKBP1-224ENST00000600718 GCOM2Q9BZD3 368 aaPredicted RBP19.14■□□□□ 0.65
SHKBP1-224ENST00000600718 AIPL1Q9NZN9 384 aa19.14■□□□□ 0.65
SHKBP1-224ENST00000600718 FHOD1Q9Y613 1164 aa19.14■□□□□ 0.65
SHKBP1-224ENST00000600718 ADGRG1Q9Y653 693 aa19.14■□□□□ 0.65
SHKBP1-224ENST00000600718 EPN1Q9Y6I3 576 aaPredicted RBP19.14■□□□□ 0.65
SHKBP1-224ENST00000600718 CNTNAP2Q9UHC6 1331 aa19.14■□□□□ 0.65
SHKBP1-224ENST00000600718 DYNC1I1O14576 645 aa19.13■□□□□ 0.65
SHKBP1-224ENST00000600718 TREHO43280 583 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms